Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1502 Erigeron canadensis HOM05D001332 ORTHO05D007191 3.8e-42 174.5 92 100.0
Lsat_1_v5_gn_1_35340 Lactuca sativa HOM05D001332 ORTHO05D007191 7.5e-30 133.7 92 77.2
HanXRQChr02g0032311 Helianthus annuus HOM05D001332 ORTHO05D007191 3.5e-27 124.8 92 70.7
GSVIVG01017055001 Vitis vinifera HOM05D001332 ORTHO05D007191 2.2e-18 95.5 88 55.7
Duzib235G1116 Durio zibethinus HOM05D001332 ORTHO05D007191 2.8e-16 88.6 87 50.6
Manes.04G130600 Manihot esculenta HOM05D001332 ORTHO05D007191 2.8e-16 88.6 76 53.9
Sabra03G0027100 Salix brachista HOM05D001332 ORTHO05D007191 8.0e-16 87.0 89 49.4
Lalb_Chr24g0395961 Lupinus albus HOM05D001332 ORTHO05D007191 1.0e-15 86.7 92 53.3
Atru.chr5.1338 Acer truncatum HOM05D001332 ORTHO05D007191 1.4e-15 86.3 93 47.3
Gohir.A10G082200 Gossypium hirsutum HOM05D001332 ORTHO05D007191 5.2e-15 84.3 94 48.9
Gohir.D10G069533 Gossypium hirsutum HOM05D001332 ORTHO05D007191 6.8e-15 84.0 94 48.9
Gorai.011G073500 Gossypium raimondii HOM05D001332 ORTHO05D007191 6.8e-15 84.0 94 48.9
MBI01_g30864_MAGBIO Magnolia biondii HOM05D001332 ORTHO05D007191 8.8e-15 83.6 79 49.4
Nn3g18113 Nelumbo nucifera HOM05D001332 ORTHO05D007191 8.8e-15 83.6 89 50.6
Duzib235G0321 Durio zibethinus HOM05D001332 ORTHO05D007191 1.2e-14 83.2 86 48.8
Potri.003G051900 Populus trichocarpa HOM05D001332 ORTHO05D007191 1.5e-14 82.8 88 47.7
Thecc.K0003500 Theobroma cacao HOM05D001332 ORTHO05D007191 2.0e-14 82.4 92 47.8
CiPaw.01G235000 Carya illinoinensis HOM05D001332 ORTHO05D007191 3.4e-14 81.6 88 46.6
QL05p021486 Quercus lobata HOM05D001332 ORTHO05D007191 4.4e-14 81.3 91 47.3
Atru.chr5.1339 Acer truncatum HOM05D001332 ORTHO05D007191 9.8e-14 80.1 76 52.6
Atru.chr5.1336 Acer truncatum HOM05D001332 ORTHO05D007191 1.7e-13 79.3 76 55.3
TWI75G0298 Tripterygium wilfordii HOM05D001332 ORTHO05D007191 1.7e-13 79.3 89 44.9
Thecc.06G093500 Theobroma cacao HOM05D001332 ORTHO05D007191 2.8e-13 78.6 89 40.4
PSO566G0103 Papaver somniferum HOM05D001332 ORTHO05D007191 4.9e-13 77.8 78 51.3
RcHm_v2.0_Chr2g0139201 Rosa chinensis HOM05D001332 ORTHO05D007191 4.9e-13 77.8 86 45.3
CDE02G4323 Ceratophyllum demersum HOM05D001332 ORTHO05D007191 6.3e-13 77.4 78 48.7
Manes.11G037300 Manihot esculenta HOM05D001332 ORTHO05D007191 6.3e-13 77.4 75 54.7
Glyma.08G204100 Glycine max HOM05D001332 ORTHO05D007191 8.3e-13 77.0 88 45.5
PSO782G1332 Papaver somniferum HOM05D001332 ORTHO05D007191 1.1e-12 76.6 73 57.5
COL.COLO4_30444 Corchorus olitorius HOM05D001332 ORTHO05D007191 1.4e-12 76.3 86 43.0
Hma1.2p1_1195F.1_g265910 Hydrangea macrophylla HOM05D001332 ORTHO05D007191 1.4e-12 76.3 88 46.6
TAR626G0296 Trochodendron aralioides HOM05D001332 ORTHO05D007191 1.8e-12 75.9 83 48.2
Hma1.2p1_1195F.1_g265920 Hydrangea macrophylla HOM05D001332 ORTHO05D007191 2.4e-12 75.5 88 44.3
Lalb_Chr04g0262821 Lupinus albus HOM05D001332 ORTHO05D007191 2.4e-12 75.5 92 44.6
Actinidia21687 Actinidia chinensis HOM05D001332 ORTHO05D007191 3.1e-12 75.1 82 45.1
Ciclev10022724m.g Citrus clementina HOM05D001332 ORTHO05D007191 3.1e-12 75.1 76 50.0
Eucgr.F03046 Eucalyptus grandis HOM05D001332 ORTHO05D007191 3.1e-12 75.1 94 45.7
Rhsim08G0224600 Rhododendron simsii HOM05D001332 ORTHO05D007191 3.1e-12 75.1 79 49.4
Thecc.06G093300 Theobroma cacao HOM05D001332 ORTHO05D007191 3.1e-12 75.1 86 39.5
FvH4_6g31870 Fragaria vesca HOM05D001332 ORTHO05D007191 4.1e-12 74.7 83 47.0
Gohir.D09G081600 Gossypium hirsutum HOM05D001332 ORTHO05D007191 5.4e-12 74.3 90 38.9
Gohir.D09G081800 Gossypium hirsutum HOM05D001332 ORTHO05D007191 5.4e-12 74.3 87 41.4
Gorai.006G097200 Gossypium raimondii HOM05D001332 ORTHO05D007191 5.4e-12 74.3 90 38.9
Gorai.006G097400 Gossypium raimondii HOM05D001332 ORTHO05D007191 7.0e-12 73.9 85 40.0
PSO566G0221 Papaver somniferum HOM05D001332 ORTHO05D007191 7.0e-12 73.9 92 46.7
Phvul.010G148100 Phaseolus vulgaris HOM05D001332 ORTHO05D007191 7.0e-12 73.9 92 43.5
PSO566G0088 Papaver somniferum HOM05D001332 ORTHO05D007191 1.2e-11 73.2 76 51.3
PGR102G2935 Punica granatum HOM05D001332 ORTHO05D007191 1.2e-11 73.2 88 42.0
THA.LOC104810529 Tarenaya hassleriana HOM05D001332 ORTHO05D007191 1.2e-11 73.2 72 52.8
vmacro18880 Vaccinium macrocarpon HOM05D001332 ORTHO05D007191 1.6e-11 72.8 79 48.1
Atru.chr5.1335 Acer truncatum HOM05D001332 ORTHO05D007191 2.0e-11 72.4 88 46.6
Gohir.A09G082000 Gossypium hirsutum HOM05D001332 ORTHO05D007191 2.0e-11 72.4 76 44.7
HPP92_023909 Vanilla planifolia HOM05D001332 ORTHO05D007191 2.0e-11 72.4 78 44.9
Duzib192G0931 Durio zibethinus HOM05D001332 ORTHO05D007191 2.7e-11 72.0 88 40.9
Os01g0229500 Oryza sativa ssp. japonica HOM05D001332 ORTHO05D007191 2.7e-11 72.0 87 43.7
Gohir.A09G081501 Gossypium hirsutum HOM05D001332 ORTHO05D007191 3.5e-11 71.6 90 36.7
Aqoxy7G01569 Aquilegia oxysepala HOM05D001332 ORTHO05D007191 5.9e-11 70.9 76 47.4
AT3G16175 Arabidopsis thaliana HOM05D001332 ORTHO05D007191 5.9e-11 70.9 85 44.7
COL.COLO4_30447 Corchorus olitorius HOM05D001332 ORTHO05D007191 7.8e-11 70.5 92 39.1
QL05p021499 Quercus lobata HOM05D001332 ORTHO05D007191 7.8e-11 70.5 91 44.0
VMungo0331G1603 Vigna mungo HOM05D001332 ORTHO05D007191 7.8e-11 70.5 92 43.5
Gohir.A09G081750 Gossypium hirsutum HOM05D001332 ORTHO05D007191 1.3e-10 69.7 88 38.6
Aqoxy7G01571 Aquilegia oxysepala HOM05D002562 ORTHO05D002808 1.7e-10 69.3 81 45.7
PSO566G0099 Papaver somniferum HOM05D001332 ORTHO05D007191 1.7e-10 69.3 82 47.6
Rhsim04G0138500 Rhododendron simsii HOM05D001332 ORTHO05D007191 1.7e-10 69.3 81 42.0
COL.COLO4_30446 Corchorus olitorius HOM05D001332 ORTHO05D007191 2.3e-10 68.9 92 38.0
DCAR_026335 Daucus carota HOM05D000169 ORTHO05D004780 2.9e-10 68.6 75 48.0
AL3G28860 Arabidopsis lyrata HOM05D001332 ORTHO05D007191 3.8e-10 68.2 82 43.9
Lj3g0003406 Lotus japonicus HOM05D001332 ORTHO05D007191 5.0e-10 67.8 93 41.9
CDE04G2932 Ceratophyllum demersum HOM05D001332 ORTHO05D007191 8.6e-10 67.0 74 41.9
COL.COLO4_30445 Corchorus olitorius HOM05D001332 ORTHO05D007191 8.6e-10 67.0 82 36.6
BcaNung07318 Brassica carinata HOM05D001332 ORTHO05D007191 1.1e-09 66.6 91 38.5
Zm00001eb036370 Zea mays HOM05D001332 ORTHO05D007191 1.1e-09 66.6 91 37.4
Actinidia32721 Actinidia chinensis HOM05D001332 ORTHO05D007191 1.5e-09 66.2 82 40.2
A01p37920 Brassica napus HOM05D001332 ORTHO05D007191 1.5e-09 66.2 91 38.5
BolC1t04778H Brassica oleracea HOM05D001332 ORTHO05D007191 1.5e-09 66.2 91 38.5
FAN14G0254 Fragaria x ananassa HOM05D001332 ORTHO05D007191 1.5e-09 66.2 83 45.8
Gohir.D09G081701 Gossypium hirsutum HOM05D001332 ORTHO05D007191 1.5e-09 66.2 88 35.2
Lj3g0006474 Lotus japonicus HOM05D001332 ORTHO05D007191 1.5e-09 66.2 77 44.2
C01p48100 Brassica napus HOM05D001332 ORTHO05D007191 1.9e-09 65.9 91 38.5
Carub.0003s1592 Capsella rubella HOM05D001332 ORTHO05D007191 1.9e-09 65.9 82 42.7
Thhalv10021690m.g Eutrema salsugineum HOM05D001332 ORTHO05D007191 1.9e-09 65.9 82 42.7
FAN05G3284 Fragaria x ananassa HOM05D001332 ORTHO05D007191 1.9e-09 65.9 83 47.0
Aqoxy7G01570 Aquilegia oxysepala HOM05D001332 ORTHO05D007191 2.5e-09 65.5 87 41.4
Gohir.A09G081901 Gossypium hirsutum HOM05D001332 ORTHO05D007191 2.5e-09 65.5 66 45.5
Gorai.010G093600 Gossypium raimondii HOM05D001332 ORTHO05D007191 3.3e-09 65.1 67 49.3
Nn3g18108 Nelumbo nucifera HOM05D001332 ORTHO05D007191 3.3e-09 65.1 85 41.2
ATR0315G150 Amborella trichopoda HOM05D001332 ORTHO05D007191 4.3e-09 64.7 79 39.2
BcaB06g25710 Brassica carinata HOM05D001332 ORTHO05D007191 7.3e-09 63.9 91 38.5
A08p02280 Brassica napus HOM05D001332 ORTHO05D007191 1.2e-08 63.2 76 43.4
Gohir.A09G081600 Gossypium hirsutum HOM05D001332 ORTHO05D007191 1.2e-08 63.2 76 40.8
Sp3g14540 Schrenkiella parvula HOM05D001332 ORTHO05D007191 1.2e-08 63.2 82 40.2
Zm00001eb109700 Zea mays HOM05D001332 ORTHO05D007191 1.2e-08 63.2 74 37.8
Zm00001eb194720 Zea mays HOM05D001332 ORTHO05D007191 1.2e-08 63.2 74 37.8
BraA01t03852Z Brassica rapa HOM05D001332 ORTHO05D007191 1.6e-08 62.8 91 36.3
PSO782G2566 Papaver somniferum HOM05D001332 ORTHO05D007191 1.6e-08 62.8 78 47.4
THA.LOC104815522 Tarenaya hassleriana HOM05D001332 ORTHO05D007191 2.1e-08 62.4 96 43.8
Gohir.A10G082000 Gossypium hirsutum HOM05D001332 ORTHO05D007191 2.8e-08 62.0 87 37.9
Gorai.006G097300 Gossypium raimondii HOM05D001332 ORTHO05D007191 2.8e-08 62.0 75 38.7
Gorai.011G073600 Gossypium raimondii HOM05D001332 ORTHO05D007191 2.8e-08 62.0 95 37.9
BraA08t32273Z Brassica rapa HOM05D001332 ORTHO05D007191 3.6e-08 61.6 76 42.1
COL.COLO4_30449 Corchorus olitorius HOM05D001332 ORTHO05D007191 3.6e-08 61.6 69 46.4
Lj3g0004516 Lotus japonicus HOM05D001332 ORTHO05D007191 4.7e-08 61.2 74 41.9
CARHR091340 Cardamine hirsuta HOM05D001332 ORTHO05D007191 1.0e-07 60.1 90 38.9
Gohir.A05G132100 Gossypium hirsutum HOM05D001332 ORTHO05D007191 1.0e-07 60.1 53 49.1
TWI75G1037 Tripterygium wilfordii HOM05D001332 ORTHO05D007191 1.0e-07 60.1 71 42.3
PSO782G4863 Papaver somniferum HOM05D001332 ORTHO05D007191 2.3e-07 58.9 66 45.5
Zm00001eb119310 Zea mays HOM05D001332 ORTHO05D007191 2.3e-07 58.9 89 33.7
SEGI_10406 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 4.0e-07 58.2 73 39.7
Gorai.009G135500 Gossypium raimondii HOM05D001332 ORTHO05D007191 5.2e-07 57.8 78 38.5
Carub.0001s4116 Capsella rubella HOM05D001332 ORTHO05D007191 2.0e-06 55.8 84 41.7
AT1G52191 Arabidopsis thaliana HOM05D001332 ORTHO05D007191 3.4e-06 55.1 77 41.6
BcaB04g17166 Brassica carinata HOM05D001332 ORTHO05D007191 4.4e-06 54.7 76 39.5


User provided reference genes

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