Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 5.0e-208 728.0 517 100.0
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 2.5e-34 151.0 217 44.2
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 4.8e-33 146.7 273 39.9
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 6.2e-33 146.4 242 40.9
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 6.9e-32 142.9 255 38.4
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 9.0e-32 142.5 330 36.7
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 2.0e-31 141.4 187 47.1
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 2.6e-31 141.0 189 45.0
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 3.4e-31 140.6 319 35.1
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.0e-30 139.0 301 35.5
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 1.0e-30 139.0 301 35.5
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.0e-30 139.0 312 35.9
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.3e-30 138.7 263 39.5
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 2.2e-30 137.9 294 37.4
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 4.9e-30 136.7 180 43.9
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 4.9e-30 136.7 278 40.6
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.4e-29 135.2 314 34.4
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.4e-29 135.2 219 40.6
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.9e-29 134.8 185 44.9
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 3.2e-29 134.0 192 44.3
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 4.2e-29 133.7 297 37.4
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 4.2e-29 133.7 332 34.0
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 9.3e-29 132.5 219 40.6
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 9.3e-29 132.5 307 35.2
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.7e-28 131.0 333 33.9
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 6.0e-28 129.8 258 39.5
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.3e-27 128.6 303 36.6
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 2.3e-27 127.9 206 41.3
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 3.0e-27 127.5 182 41.8
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 5.1e-27 126.7 210 38.6
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 6.7e-27 126.3 292 35.3
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 1.9e-26 124.8 287 35.5
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 2.5e-26 124.4 218 39.0
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 2.5e-26 124.4 246 37.4
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 2.5e-26 124.4 208 40.9
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.3e-26 124.0 266 38.3
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 1.3e-25 122.1 288 33.7
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.3e-25 122.1 285 36.1
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.6e-25 121.7 207 36.7
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 2.2e-25 121.3 243 33.7
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 2.8e-25 120.9 177 42.9
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 2.8e-25 120.9 183 41.5
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 4.8e-25 120.2 266 36.1
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 6.3e-25 119.8 179 45.3
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 6.3e-25 119.8 268 34.3
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 8.2e-25 119.4 181 41.4
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 1.4e-24 118.6 302 35.1
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 1.8e-24 118.2 171 42.1
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 1.8e-24 118.2 296 33.4
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 3.1e-24 117.5 186 42.5
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 5.3e-24 116.7 242 33.9
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 6.9e-24 116.3 237 34.2
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 9.0e-24 115.9 171 41.5
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 1.2e-23 115.5 177 37.9
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 1.2e-23 115.5 171 41.5
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 1.5e-23 115.2 173 40.5
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 1.5e-23 115.2 173 40.5
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.6e-23 114.4 240 34.2
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 5.9e-23 113.2 267 37.5
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 5.9e-23 113.2 182 37.9
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 7.7e-23 112.8 183 37.7
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 1.3e-22 112.1 324 32.1
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 1.7e-22 111.7 244 34.4
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 2.9e-22 110.9 294 35.4
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 3.8e-22 110.5 306 33.3
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 3.8e-22 110.5 253 32.4
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 5.0e-22 110.2 184 40.2
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.9e-21 108.2 293 32.8
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 3.2e-21 107.5 180 40.0
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 4.2e-21 107.1 276 34.1
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 9.4e-21 105.9 269 33.5
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.1e-20 104.8 322 32.9
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 2.7e-20 104.4 287 33.8
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 4.6e-20 103.6 291 34.7
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 1.4e-19 102.1 306 33.0
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 1.7e-17 95.1 177 37.9
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 1.1e-16 92.4 224 36.2
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 2.4e-16 91.3 340 28.8
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 2.4e-16 91.3 175 34.9
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 4.1e-16 90.5 174 34.5
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 1.5e-15 88.6 172 36.6
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.5e-15 88.6 186 34.9
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 2.0e-15 88.2 285 32.3
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 2.6e-15 87.8 188 35.1
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 2.6e-15 87.8 175 37.1
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.4e-15 87.4 293 31.4
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 4.5e-15 87.0 310 31.0
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.5e-15 87.0 293 31.4
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 4.5e-15 87.0 158 39.9
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 7.7e-15 86.3 324 30.6
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.0e-14 85.9 235 34.0
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 1.3e-14 85.5 199 31.2
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.2e-14 84.7 176 34.1
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 2.2e-14 84.7 311 29.9
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 2.9e-14 84.3 206 34.0
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 8.5e-14 82.8 260 32.7
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 8.5e-14 82.8 170 34.7
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.1e-13 82.4 259 34.0
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 1.1e-13 82.4 181 35.9
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 3.2e-13 80.9 199 30.7
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 4.2e-13 80.5 221 33.9
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 5.5e-13 80.1 162 37.0
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 5.5e-13 80.1 103 44.7
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 1.6e-12 78.6 132 40.2
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 3.6e-12 77.4 254 29.5
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 4.7e-12 77.0 128 39.1
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 4.7e-12 77.0 308 28.6
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.3e-11 74.7 200 34.0
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.6e-10 71.2 206 30.1
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 7.4e-10 69.7 250 31.6
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.2e-09 68.2 106 41.5
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 8.2e-09 66.2 236 31.8
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.1e-08 65.9 83 42.2
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 1.1e-08 65.9 299 29.4
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 4.1e-08 63.9 249 28.1
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 7.0e-08 63.2 245 29.8
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 3.8e-06 57.4 101 34.7
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 5.0e-06 57.0 237 28.3
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 6.5e-06 56.6 99 35.4
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 6.5e-06 56.6 99 35.4


User provided reference genes

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