Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1196 Erigeron canadensis HOM05D006046 ORTHO05D007580 6.1e-70 267.3 130 100.0
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 5.1e-32 141.4 87 85.1
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 1.1e-26 123.6 87 75.9
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 2.1e-22 109.4 87 66.7
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 2.1e-22 109.4 91 63.7
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 3.6e-22 108.6 87 62.1
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 3.6e-22 108.6 87 62.1
Hma1.2p1_0408F.1_g146260 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 4.7e-22 108.2 87 66.7
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 6.2e-22 107.8 86 64.0
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 6.2e-22 107.8 90 61.1
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 6.2e-22 107.8 87 65.5
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 8.1e-22 107.5 87 63.2
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 8.1e-22 107.5 85 65.9
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 8.1e-22 107.5 88 62.5
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 1.1e-21 107.1 92 63.0
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 1.4e-21 106.7 87 64.4
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 1.8e-21 106.3 89 60.7
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 1.8e-21 106.3 87 63.2
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 3.1e-21 105.5 87 60.9
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 3.1e-21 105.5 91 63.7
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 4.0e-21 105.1 94 61.7
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 4.0e-21 105.1 85 65.9
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 5.2e-21 104.8 86 62.8
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 5.2e-21 104.8 87 64.4
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 6.8e-21 104.4 87 63.2
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 6.8e-21 104.4 87 62.1
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 6.8e-21 104.4 90 62.2
CDE05G0285 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 8.9e-21 104.0 89 59.6
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 8.9e-21 104.0 86 61.6
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 8.9e-21 104.0 86 61.6
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 1.2e-20 103.6 89 60.7
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.2e-20 103.6 86 61.6
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 1.5e-20 103.2 86 61.6
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 2.0e-20 102.8 95 55.8
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.0e-20 102.8 87 63.2
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 2.0e-20 102.8 87 60.9
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 2.6e-20 102.4 89 58.4
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 2.6e-20 102.4 86 60.5
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 2.6e-20 102.4 86 62.8
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 3.4e-20 102.1 86 61.6
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 3.4e-20 102.1 98 54.1
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 3.4e-20 102.1 87 60.9
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 3.4e-20 102.1 86 59.3
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 3.4e-20 102.1 87 60.9
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 3.4e-20 102.1 100 55.0
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 4.4e-20 101.7 86 59.3
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 4.4e-20 101.7 91 60.4
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 4.4e-20 101.7 94 56.4
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 4.4e-20 101.7 87 60.9
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 5.8e-20 101.3 83 65.1
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 7.6e-20 100.9 87 59.8
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 7.6e-20 100.9 87 58.6
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 7.6e-20 100.9 87 57.5
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 9.9e-20 100.5 86 59.3
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 9.9e-20 100.5 90 57.8
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 9.9e-20 100.5 87 59.8
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 9.9e-20 100.5 87 62.1
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 9.9e-20 100.5 87 62.1
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 9.9e-20 100.5 87 58.6
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 9.9e-20 100.5 87 59.8
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 1.3e-19 100.1 86 59.3
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 1.3e-19 100.1 87 56.3
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 1.3e-19 100.1 87 58.6
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 1.3e-19 100.1 87 62.1
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 1.7e-19 99.8 87 62.1
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 2.2e-19 99.4 84 61.9
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 2.2e-19 99.4 84 61.9
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 2.2e-19 99.4 84 61.9
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 2.2e-19 99.4 84 61.9
AUR62042114 Chenopodium quinoa HOM05D006046 ORTHO05D007580 2.2e-19 99.4 82 58.5
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 2.9e-19 99.0 87 59.8
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 3.8e-19 98.6 92 58.7
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 4.9e-19 98.2 84 60.7
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 4.9e-19 98.2 87 58.6
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 6.4e-19 97.8 109 49.5
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 8.4e-19 97.4 109 50.5
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 8.4e-19 97.4 86 59.3
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 8.4e-19 97.4 86 57.0
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 1.1e-18 97.1 89 56.2
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 1.1e-18 97.1 87 56.3
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 1.4e-18 96.7 86 53.5
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 1.4e-18 96.7 87 57.5
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 1.4e-18 96.7 87 58.6
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 1.9e-18 96.3 91 53.8
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.9e-18 96.3 91 53.8
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 2.4e-18 95.9 84 59.5
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 2.4e-18 95.9 87 58.6
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 2.4e-18 95.9 106 50.9
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 3.2e-18 95.5 86 59.3
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 3.2e-18 95.5 89 57.3
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 5.4e-18 94.7 84 58.3
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 5.4e-18 94.7 91 52.7
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 7.1e-18 94.4 91 52.7
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.6e-17 93.2 91 51.6
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 1.6e-17 93.2 87 56.3
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 2.1e-17 92.8 90 56.7
arahy.Tifrunner.gnm1.ann1.X26H0K Arachis hypogaea HOM05D006046 ORTHO05D007580 2.7e-17 92.4 93 50.5
Glyma.02G007232 Glycine max HOM05D006046 ORTHO05D007580 3.5e-17 92.0 94 50.0
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 3.0e-16 89.0 99 52.5
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 3.0e-16 89.0 111 50.5
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 6.6e-16 87.8 90 53.3
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 8.7e-16 87.4 90 53.3
arahy.Tifrunner.gnm1.ann1.45WRUP Arachis hypogaea HOM05D006046 ORTHO05D007580 3.3e-15 85.5 86 53.5
arahy.Tifrunner.gnm1.ann1.R45IF4 Arachis hypogaea HOM05D006046 ORTHO05D007580 5.6e-15 84.7 86 51.2
CBR_g88559 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-14 82.4 100 47.0
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 2.8e-14 82.4 91 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 1.1e-13 80.5 101 45.5
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 2.4e-13 79.3 121 43.8
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 1.5e-12 76.6 109 40.4
arahy.Tifrunner.gnm1.ann1.W5PTGQ Arachis hypogaea HOM05D006046 ORTHO05D007580 2.2e-11 72.8 85 44.7
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 3.8e-11 72.0 107 42.1
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 1.1e-07 60.5 73 41.1
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 9.6e-07 57.4 53 58.5


User provided reference genes

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