Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 0.0e+00 1628.6 915 100.0
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 8.2e-121 439.1 682 42.4
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.2e-114 418.7 685 41.5
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 4.8e-113 413.3 688 41.1
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 9.9e-74 282.7 644 36.3
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 2.5e-61 241.5 749 31.6
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 2.9e-57 228.0 732 31.4
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 9.3e-56 223.0 736 30.4
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 1.5e-53 215.7 724 29.6
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.4e-51 209.1 718 28.1
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 4.0e-51 207.6 772 30.4
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 4.5e-50 204.1 737 28.6
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 4.9e-49 200.7 721 28.2
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.4e-48 199.1 708 31.5
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 3.2e-48 198.0 767 29.9
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 3.2e-48 198.0 773 29.4
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 4.2e-48 197.6 831 27.4
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 7.1e-48 196.8 711 29.5
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 9.3e-48 196.4 723 28.8
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.1e-47 195.3 719 31.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.1e-47 195.3 719 31.0
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.7e-47 194.9 722 28.7
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 2.3e-46 191.8 905 26.7
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 3.0e-46 191.4 721 29.0
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 3.0e-46 191.4 697 28.8
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 3.9e-46 191.0 704 29.1
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.1e-45 189.5 715 28.4
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.1e-44 185.3 846 27.9
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 8.2e-44 183.3 691 30.1
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.9e-43 180.3 716 27.9
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 5.8e-42 177.2 729 27.8
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 7.6e-42 176.8 758 27.3
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 7.6e-42 176.8 733 27.6
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.3e-41 176.0 741 28.3
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 8.4e-41 173.3 707 31.7
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.1e-40 172.9 446 33.6
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.4e-40 172.6 756 28.6
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 3.2e-40 171.4 773 26.5
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 4.2e-40 171.0 728 28.4
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.6e-39 169.1 732 26.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 6.1e-39 167.2 764 27.6
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 2.3e-38 165.2 841 27.0
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.5e-37 162.5 708 27.0
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.5e-37 162.5 698 31.2
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.5e-37 162.5 728 27.7
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 3.3e-37 161.4 859 26.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.3e-36 159.5 911 25.4
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 6.3e-36 157.1 652 29.6
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 2.4e-35 155.2 751 24.9
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 6.9e-35 153.7 696 26.9
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 1.2e-34 152.9 774 25.6
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 2.0e-34 152.1 730 26.4
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 5.9e-34 150.6 406 32.5
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.7e-33 149.1 667 27.4
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 2.9e-33 148.3 699 27.6
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 2.9e-33 148.3 738 26.7
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 2.9e-33 148.3 801 26.5
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.0e-33 147.5 667 27.3
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 5.0e-33 147.5 725 25.7
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 6.5e-33 147.1 757 29.7
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 8.5e-33 146.7 757 29.2
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.1e-32 146.4 719 27.0
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 2.5e-32 145.2 711 25.7
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 4.2e-32 144.4 810 24.7
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 4.2e-32 144.4 661 26.9
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.5e-32 144.1 661 26.8
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 7.2e-32 143.7 837 24.7
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 2.1e-31 142.1 722 25.8
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 5.1e-30 137.5 688 26.9
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 8.8e-30 136.7 693 27.0
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 1.5e-29 136.0 828 23.7
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.0e-29 135.6 420 28.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 4.8e-28 131.0 638 27.0
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 1.8e-27 129.0 719 26.0
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.4e-27 128.6 453 30.0
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.4e-27 128.6 745 27.4
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.1e-27 128.3 688 25.4
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 4.1e-27 127.9 849 23.8
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 9.1e-27 126.7 707 29.0
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.0e-26 125.6 752 26.9
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.0e-26 125.6 798 23.8
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.0e-25 123.2 663 27.1
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.0e-25 123.2 777 23.4
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 2.2e-25 122.1 908 23.5
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.9e-25 121.7 740 24.1
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 5.0e-25 120.9 823 24.9
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 3.2e-24 118.2 717 24.7
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.2e-24 118.2 776 23.6
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 5.5e-24 117.5 748 24.2
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 7.9e-23 113.6 712 23.9
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.0e-22 111.7 715 25.2
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 5.1e-22 110.9 534 27.3
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.7e-22 110.5 770 24.3
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.1e-21 109.8 671 23.8
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 2.6e-21 108.6 745 24.2
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 3.3e-21 108.2 698 24.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 2.4e-19 102.1 688 24.9
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 7.0e-19 100.5 756 22.8
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 9.1e-19 100.1 750 23.3
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 9.1e-19 100.1 741 23.3
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.2e-18 99.8 614 25.2
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 1.5e-18 99.4 760 23.4
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 1.7e-17 95.9 752 24.1
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 3.2e-16 91.7 743 23.7
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 5.5e-16 90.9 334 27.2
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 1.6e-15 89.4 698 23.8
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.1e-15 89.0 607 26.2
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.7e-15 87.8 104 46.2
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 4.7e-15 87.8 97 49.5
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 6.1e-15 87.4 97 49.5
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.0e-14 86.7 123 44.7
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.8e-14 85.9 114 41.2
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 3.9e-14 84.7 114 44.7
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.0e-13 82.4 907 21.1
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 2.6e-13 82.0 703 24.0
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.3e-12 79.7 752 21.9
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.8e-12 78.6 94 44.7
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 8.2e-12 77.0 581 23.9
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 1.8e-11 75.9 508 25.4
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.4e-11 75.5 84 51.2
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 7.0e-11 73.9 82 52.4
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.6e-10 72.8 154 33.8
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.6e-10 72.8 76 48.7
ECA232G0011 Erigeron canadensis HOM05D000006 ORTHO05D009717 2.0e-10 72.4 55 61.8
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 2.6e-10 72.0 735 24.6
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.6e-10 72.0 265 26.4
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 2.6e-10 72.0 105 41.0
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 5.9e-10 70.9 83 48.2
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 1.3e-09 69.7 717 21.5
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 2.2e-09 68.9 141 39.0
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 5.0e-09 67.8 144 33.3
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 1.1e-08 66.6 370 27.3
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.5e-08 65.5 85 43.5
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 5.5e-08 64.3 105 42.9
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.2e-07 63.2 93 40.9
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 1.6e-07 62.8 50 50.0
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 2.1e-07 62.4 110 40.0
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.6e-07 61.6 47 57.4
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 6.1e-07 60.8 397 22.7
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.0e-06 60.1 124 35.5
HanXRQChr12g0366341 Helianthus annuus HOM05D004831 ORTHO05D003975 8.8e-06 57.0 94 42.6
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 8.8e-06 57.0 118 35.6


User provided reference genes

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