Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G1160 Erigeron canadensis HOM05D036494 ORTHO05D001736 8.0e-165 583.9 353 100.0
HanXRQChr02g0044751 Helianthus annuus HOM05D036494 ORTHO05D001736 5.3e-60 235.7 339 49.0
Lsat_1_v5_gn_1_14481 Lactuca sativa HOM05D036494 ORTHO05D001736 1.5e-46 191.0 358 46.6
CAN.G1228.21 Capsicum annuum HOM05D006637 ORTHO05D001736 1.9e-12 77.8 286 29.7
Rhsim12G0148600 Rhododendron simsii HOM05D006637 ORTHO05D001736 4.1e-12 76.6 124 43.5
vmacro16493 Vaccinium macrocarpon HOM05D006637 ORTHO05D001736 4.1e-12 76.6 104 44.2
PGSC0003DMG400024635 Solanum tuberosum HOM05D006637 ORTHO05D001736 9.2e-12 75.5 353 29.7
Lsat_1_v5_gn_4_111160 Lactuca sativa HOM05D006637 ORTHO05D001736 1.6e-11 74.7 352 26.7
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 2.1e-11 74.3 77 54.5
Sopen03g034130 Solanum pennellii HOM05D006637 ORTHO05D001736 4.6e-11 73.2 312 29.8
DCAR_011559 Daucus carota HOM05D006637 ORTHO05D001736 6.0e-11 72.8 151 36.4
Solyc03g115060.3 Solanum lycopersicum HOM05D006637 ORTHO05D001736 1.3e-10 71.6 341 28.2
Actinidia04823 Actinidia chinensis HOM05D006637 ORTHO05D001736 5.1e-10 69.7 75 53.3
CiPaw.11G054000 Carya illinoinensis HOM05D006637 ORTHO05D001736 1.5e-09 68.2 351 27.4
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 1.5e-09 68.2 116 38.8
Dinv22776 Davidia involucrata HOM05D006637 ORTHO05D001736 1.9e-09 67.8 235 28.1
Glyma.06G204000 Glycine max HOM05D006637 ORTHO05D001736 7.3e-09 65.9 78 51.3
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 1.6e-08 64.7 158 36.1
Phvul.009G201900 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 1.6e-08 64.7 87 46.0
AUR62021555 Chenopodium quinoa HOM05D006637 ORTHO05D001736 8.1e-08 62.4 133 39.1
Migut.I00333 Erythranthe guttata HOM05D006637 ORTHO05D001736 8.1e-08 62.4 66 53.0
Duzib205G1030 Durio zibethinus HOM05D006637 ORTHO05D001736 1.8e-07 61.2 285 28.8
Glyma.17G078600 Glycine max HOM05D006637 ORTHO05D001736 1.8e-07 61.2 87 42.5
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 1.8e-07 61.2 166 36.1
Sed0008450 Sechium edule HOM05D006637 ORTHO05D001736 1.8e-07 61.2 288 28.1
Lj5C102T22 Lonicera japonica HOM05D006637 ORTHO05D001736 2.4e-07 60.8 271 27.3
Glyma.04G162200 Glycine max HOM05D006637 ORTHO05D001736 3.1e-07 60.5 68 51.5
AUR62008536 Chenopodium quinoa HOM05D006637 ORTHO05D001736 5.2e-07 59.7 147 32.7
Manes.14G086000 Manihot esculenta HOM05D006637 ORTHO05D001736 5.2e-07 59.7 279 25.4
GSVIVG01007850001 Vitis vinifera HOM05D006637 ORTHO05D001736 5.2e-07 59.7 344 28.2
CSS0036361 Camellia sinensis var. sinensis HOM05D006637 ORTHO05D001736 6.9e-07 59.3 88 40.9
ATR0177G031 Amborella trichopoda HOM05D003787 ORTHO05D001736 9.0e-07 58.9 108 41.7
FAN08G0389 Fragaria x ananassa HOM05D006637 ORTHO05D001736 9.0e-07 58.9 380 26.3
Manes.06G084300 Manihot esculenta HOM05D006637 ORTHO05D001736 9.0e-07 58.9 371 24.3
Cfa019342 Carpinus fangiana HOM05D000824 ORTHO05D003555 1.2e-06 58.5 170 35.9
vmacro10428 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 2.0e-06 57.8 84 42.9
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 2.6e-06 57.4 356 27.0
FvH4_5g13780 Fragaria vesca HOM05D006637 ORTHO05D001736 2.6e-06 57.4 368 27.2
FAN18G2922 Fragaria x ananassa HOM05D006637 ORTHO05D001736 2.6e-06 57.4 368 26.9
PSO017G7320 Papaver somniferum HOM05D006637 ORTHO05D001736 2.6e-06 57.4 98 41.8
AL2G34100 Arabidopsis lyrata HOM05D006637 ORTHO05D001736 3.4e-06 57.0 304 28.0
Oeu044877.1 Olea europaea HOM05D006637 ORTHO05D001736 3.4e-06 57.0 264 28.4
PSO478G0913 Papaver somniferum HOM05D006637 ORTHO05D001736 3.4e-06 57.0 98 41.8
Thecc.03G102400 Theobroma cacao HOM05D006637 ORTHO05D001736 3.4e-06 57.0 341 26.1
Haze_07733 Corylus avellana HOM05D006637 ORTHO05D001736 4.4e-06 56.6 162 35.2
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 4.4e-06 56.6 152 34.9
Nitab4.5_0007320g0010 Nicotiana tabacum HOM05D003787 ORTHO05D001736 4.4e-06 56.6 161 33.5
Rhsim09G0127000 Rhododendron simsii HOM05D003787 ORTHO05D001736 4.4e-06 56.6 130 36.2
TPR.G12192 Trifolium pratense HOM05D006637 ORTHO05D001736 4.4e-06 56.6 90 43.3
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 5.8e-06 56.2 67 52.2
Sabra12G0044700 Salix brachista HOM05D006637 ORTHO05D001736 5.8e-06 56.2 105 38.1
CsaV3_1G002960 Cucumis sativus L. HOM05D006637 ORTHO05D001736 7.6e-06 55.8 138 37.0
FAN13G0480 Fragaria x ananassa HOM05D006637 ORTHO05D001736 7.6e-06 55.8 376 25.5
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 7.6e-06 55.8 153 35.3
Lsat_1_v5_gn_2_90140 Lactuca sativa HOM05D003787 ORTHO05D001736 9.9e-06 55.5 298 26.8
Sed0021860 Sechium edule HOM05D006637 ORTHO05D001736 9.9e-06 55.5 168 34.5


User provided reference genes

Program Settings