Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 4.9e-64 247.7 126 100.0
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 7.8e-46 187.2 128 77.3
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.9e-44 182.6 130 74.6
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 6.4e-40 167.5 107 79.4
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 8.3e-40 167.2 131 69.5
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.1e-39 166.8 133 65.4
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.4e-39 166.4 142 66.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.9e-39 166.0 125 69.6
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 1.9e-39 166.0 125 70.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 2.4e-39 165.6 139 66.9
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.2e-39 165.2 107 78.5
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.2e-39 165.2 137 66.4
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 7.1e-39 164.1 125 68.8
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 9.2e-39 163.7 134 64.9
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.6e-38 162.9 139 63.3
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.5e-38 161.8 130 66.9
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.6e-38 161.4 138 64.5
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 4.6e-38 161.4 142 66.9
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 6.0e-38 161.0 142 62.0
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 7.8e-38 160.6 139 62.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 1.0e-37 160.2 101 83.2
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.3e-37 159.8 143 63.6
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.3e-37 159.8 94 84.0
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.3e-37 159.8 90 84.4
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.7e-37 159.5 92 83.7
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.7e-37 159.5 92 83.7
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.7e-37 159.5 92 83.7
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.7e-37 159.5 92 83.7
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.7e-37 159.5 123 67.5
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.7e-37 159.5 129 66.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.7e-37 159.5 104 78.8
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 2.3e-37 159.1 91 84.6
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 2.3e-37 159.1 91 84.6
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.0e-37 158.7 92 83.7
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 3.0e-37 158.7 141 63.1
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 3.9e-37 158.3 142 63.4
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 6.6e-37 157.5 119 70.6
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 6.6e-37 157.5 133 63.9
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 6.6e-37 157.5 126 65.9
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 8.6e-37 157.1 91 84.6
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 8.6e-37 157.1 104 77.9
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.1e-36 156.8 99 78.8
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.1e-36 156.8 138 63.0
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.1e-36 156.8 91 82.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.5e-36 156.4 138 62.3
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.5e-36 156.4 91 83.5
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.5e-36 156.4 93 81.7
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.5e-36 155.6 139 61.2
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.5e-36 155.6 141 61.7
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.5e-36 155.6 92 82.6
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 2.5e-36 155.6 129 65.9
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 3.3e-36 155.2 126 65.9
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.3e-36 155.2 125 64.8
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 3.3e-36 155.2 130 63.8
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.3e-36 154.8 125 64.8
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 4.3e-36 154.8 92 81.5
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 4.3e-36 154.8 137 61.3
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 5.6e-36 154.5 104 75.0
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 5.6e-36 154.5 99 78.8
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 5.6e-36 154.5 99 76.8
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 5.6e-36 154.5 90 81.1
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 7.3e-36 154.1 101 76.2
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 9.5e-36 153.7 125 64.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.5e-36 153.7 125 64.0
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 9.5e-36 153.7 88 85.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.2e-35 153.3 137 62.0
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.2e-35 153.3 138 60.1
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.2e-35 153.3 100 76.0
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.2e-35 153.3 97 78.4
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.6e-35 152.9 137 62.0
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 2.1e-35 152.5 87 87.4
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.1e-35 152.5 86 87.2
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.8e-35 152.1 128 67.2
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.8e-35 152.1 93 83.9
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.8e-35 152.1 91 80.2
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 2.8e-35 152.1 134 59.7
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 3.6e-35 151.8 83 88.0
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 3.6e-35 151.8 127 64.6
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 8.1e-35 150.6 128 62.5
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.3e-34 149.1 104 71.2
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.3e-34 149.1 87 82.8
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.3e-34 149.1 90 81.1
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.3e-34 149.1 90 81.1
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.1e-34 148.7 126 63.5
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 4.0e-34 148.3 82 86.6
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.2e-34 147.9 124 64.5
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 8.9e-34 147.1 132 59.1
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.2e-33 146.7 86 82.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.2e-33 146.7 125 63.2
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.6e-33 145.6 123 63.4
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 5.8e-33 144.4 108 70.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 7.6e-33 144.1 83 83.1
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.3e-32 143.3 82 81.7
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.9e-32 142.1 102 70.6
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.9e-31 139.4 110 67.3
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.6e-30 136.3 84 78.6
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 4.6e-30 134.8 83 79.5
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 3.0e-29 132.1 80 80.0
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.0e-29 132.1 101 67.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.9e-28 129.4 90 72.2
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 7.3e-28 127.5 88 70.5
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 2.9e-24 115.5 88 70.5
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 7.1e-23 110.9 99 61.6
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 5.8e-17 91.3 46 91.3
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.0e-14 81.3 46 78.3
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 3.4e-09 65.5 89 48.3
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.1e-07 60.5 51 66.7


User provided reference genes

Program Settings