Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 0.0e+00 1814.7 956 100.0
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.1e-135 487.6 877 40.1
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 4.1e-115 420.2 892 37.6
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.5e-93 348.6 556 45.3
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.5e-83 314.7 968 30.7
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 4.3e-72 277.3 883 30.0
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 9.7e-72 276.2 950 30.6
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 9.0e-70 269.6 923 30.1
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 5.9e-69 266.9 895 31.5
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.0e-68 266.2 916 30.6
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.4e-67 262.3 918 29.3
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.8e-65 255.4 926 28.9
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 9.7e-64 249.6 816 30.3
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.7e-63 248.8 262 54.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 5.3e-62 243.8 919 29.3
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 9.1e-62 243.0 934 28.8
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 5.0e-60 237.3 904 29.5
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 9.4e-59 233.0 925 28.2
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 2.0e-56 225.3 369 43.1
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 7.4e-56 223.4 930 28.5
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 7.4e-56 223.4 929 28.5
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 6.3e-55 220.3 962 29.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 4.1e-54 217.6 934 30.0
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 5.3e-54 217.2 435 37.5
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 7.0e-54 216.9 963 27.8
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.5e-53 214.2 242 51.7
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 8.5e-52 209.9 931 28.0
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 5.5e-51 207.2 271 49.8
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 9.4e-51 206.5 970 27.4
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.6e-50 205.7 960 26.7
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 2.1e-50 205.3 950 27.6
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 8.0e-50 203.4 272 46.0
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.5e-48 199.1 1050 26.5
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.7e-47 195.7 1035 27.0
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.1e-46 191.4 919 28.7
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 3.5e-45 188.0 944 26.3
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 2.9e-44 184.9 924 27.4
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.1e-43 183.0 913 26.3
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.5e-43 181.8 910 27.9
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 2.1e-42 178.7 233 48.9
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 3.6e-42 177.9 354 40.7
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.4e-41 176.0 938 25.7
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.5e-40 172.6 289 42.2
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.7e-39 169.1 338 37.0
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.2e-39 168.7 905 26.9
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.8e-39 168.3 324 38.0
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 7.0e-38 163.7 341 37.2
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 9.1e-38 163.3 327 37.0
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 9.1e-38 163.3 888 27.6
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.2e-37 162.9 327 37.0
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.7e-37 161.8 927 27.1
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.7e-36 159.1 268 41.8
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.2e-36 158.7 261 41.4
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 3.8e-36 157.9 262 41.6
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 5.0e-36 157.5 895 25.8
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 1.5e-35 156.0 294 38.8
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.5e-35 156.0 285 40.4
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 3.2e-35 154.8 268 40.3
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 3.2e-35 154.8 915 27.5
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 4.2e-35 154.5 463 30.9
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.6e-34 151.4 963 25.0
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.8e-33 149.1 353 36.8
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 3.0e-33 148.3 238 42.4
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 3.0e-33 148.3 875 27.8
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 4.0e-33 147.9 850 26.6
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 4.0e-33 147.9 265 38.1
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 8.8e-33 146.7 949 26.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 8.8e-33 146.7 334 35.3
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 8.8e-33 146.7 410 35.4
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.2e-32 146.4 259 39.4
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.0e-32 145.6 316 37.3
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.6e-32 145.2 354 35.3
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 5.7e-32 144.1 1027 24.8
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 7.5e-32 143.7 461 31.2
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 9.8e-32 143.3 897 25.4
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.2e-31 142.1 334 34.7
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.9e-31 141.0 195 45.6
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.4e-30 138.7 333 34.5
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.4e-30 137.5 965 23.7
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 7.0e-30 137.1 308 37.0
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.2e-29 136.3 291 38.5
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.0e-28 133.3 275 36.0
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.0e-28 133.3 179 44.1
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.3e-28 132.9 327 34.6
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.3e-28 132.9 261 39.5
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.7e-28 132.5 310 36.8
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 5.0e-28 131.0 259 35.9
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 5.0e-28 131.0 259 35.9
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 6.6e-28 130.6 259 35.9
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 6.6e-28 130.6 259 35.9
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.9e-27 129.0 921 24.9
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.3e-27 128.3 348 31.6
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 5.6e-27 127.5 340 33.8
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 7.3e-27 127.1 934 23.9
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.2e-26 126.3 284 34.5
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.6e-26 125.9 276 34.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 2.1e-26 125.6 262 34.7
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.4e-25 122.9 333 34.8
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 4.0e-25 121.3 260 35.8
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 1.2e-24 119.8 873 24.6
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.2e-24 119.8 262 35.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.6e-24 118.6 716 26.5
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 9.8e-24 116.7 102 62.7
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 3.2e-22 111.7 991 23.4
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 4.1e-22 111.3 308 34.1
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 9.2e-22 110.2 251 32.7
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 5.9e-21 107.5 274 35.0
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 7.8e-21 107.1 197 38.1
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.7e-20 105.9 161 43.5
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 3.0e-20 105.1 263 32.7
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.9e-20 104.8 261 33.0
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 5.6e-19 100.9 138 46.4
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.9e-14 85.9 892 23.0
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.7e-12 79.3 907 23.3
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 3.4e-08 65.1 125 36.0
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.1e-06 60.1 191 29.8


User provided reference genes

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