Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0564 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.8e-53 212.2 102 100.0
ECA236G4470 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.7e-46 189.1 105 88.6
ECA232G3677 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.2e-44 183.0 105 84.8
ECA232G0922 Erigeron canadensis HOM05D000034 ORTHO05D000277 2.6e-31 138.7 75 85.3
ECA232G2678 Erigeron canadensis HOM05D000034 ORTHO05D000277 2.6e-31 138.7 75 85.3
ECA287G0001 Erigeron canadensis HOM05D000034 ORTHO05D000277 2.6e-31 138.7 75 85.3
ECA232G0754 Erigeron canadensis HOM05D000034 ORTHO05D000037 7.2e-26 120.6 66 86.4
ECA234G3517 Erigeron canadensis HOM05D000034 ORTHO05D000277 9.5e-26 120.2 96 54.2
HanXRQChr04g0103631 Helianthus annuus HOM05D000034 ORTHO05D000277 1.4e-24 116.3 97 50.5
ECA232G1280 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.7e-23 110.9 63 82.5
Cc02_g20180 Coffea canephora HOM05D000034 ORTHO05D000277 9.8e-23 110.2 102 50.0
ECA238G2016 Erigeron canadensis HOM05D000034 ORTHO05D000277 9.8e-23 110.2 60 86.7
Cc03_g07630 Coffea canephora HOM05D000034 ORTHO05D000277 2.2e-22 109.0 97 53.6
ECA232G4438 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.5e-18 96.3 53 86.8
Cc07_g13120 Coffea canephora HOM05D000034 ORTHO05D000037 1.0e-16 90.1 98 45.9
Nn3g17802 Nelumbo nucifera HOM05D000034 ORTHO05D000277 2.0e-15 85.9 96 41.7
DCAR_003199 Daucus carota HOM05D000034 ORTHO05D000277 1.7e-14 82.8 98 44.9
FvH4_5g36380 Fragaria vesca HOM05D008011 ORTHO05D000277 2.9e-14 82.0 101 42.6
FAN14G5761 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.7e-14 81.6 102 43.1
DCAR_023746 Daucus carota HOM05D000034 ORTHO05D000277 6.4e-14 80.9 105 41.9
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.3e-14 80.5 103 42.7
FvH4_6g20010 Fragaria vesca HOM05D008011 ORTHO05D000277 8.3e-14 80.5 99 43.4
AUR62001787 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.1e-13 80.1 102 38.2
FAN18G0511 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.1e-13 80.1 99 42.4
DCAR_008359 Daucus carota HOM05D000034 ORTHO05D000277 1.4e-13 79.7 105 40.0
FAN01G0758 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.4e-13 79.7 99 41.4
EL10Ac8g19731 Beta vulgaris HOM05D000034 ORTHO05D000277 2.4e-13 79.0 97 41.2
AUR62010704 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.4e-13 79.0 103 41.7
EL10Ac9g22471 Beta vulgaris HOM05D000034 ORTHO05D000277 3.2e-13 78.6 93 43.0
EL10Ac3g06147 Beta vulgaris HOM05D000034 ORTHO05D000037 4.1e-13 78.2 90 42.2
EL10Ac5g11589 Beta vulgaris HOM05D000034 ORTHO05D000037 4.1e-13 78.2 105 42.9
DCAR_011895 Daucus carota HOM05D000034 ORTHO05D000277 5.4e-13 77.8 98 40.8
DCAR_018120 Daucus carota HOM05D000034 ORTHO05D000277 5.4e-13 77.8 98 39.8
FAN22G0968 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.4e-13 77.8 98 42.9
RcHm_v2.0_Chr7g0199171 Rosa chinensis HOM05D008011 ORTHO05D000277 5.4e-13 77.8 101 38.6
AUR62041902 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.0e-13 77.4 105 41.0
FAN09G2726 Fragaria x ananassa HOM05D008011 ORTHO05D000277 9.2e-13 77.0 98 41.8
Ah.15g098690 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.2e-12 76.6 90 42.2
AUR62026394 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-12 76.6 97 41.2
AUR62029884 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-12 76.6 105 38.1
AUR62030811 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.2e-12 76.6 105 38.1
AUR62038760 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.2e-12 76.6 103 41.7
EL10Ac7g17712 Beta vulgaris HOM05D000034 ORTHO05D000277 1.6e-12 76.3 103 40.8
FvH4_5g01520 Fragaria vesca HOM05D008011 ORTHO05D000277 1.6e-12 76.3 101 38.6
FAN18G3785 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.6e-12 76.3 101 38.6
Zm00001eb190420 Zea mays HOM05D000034 ORTHO05D000277 1.6e-12 76.3 95 42.1
Zm00001eb259640 Zea mays HOM05D000034 ORTHO05D000277 1.6e-12 76.3 95 42.1
Zm00001eb270330 Zea mays HOM05D000034 ORTHO05D000277 1.6e-12 76.3 95 42.1
FvH4_1g08720 Fragaria vesca HOM05D000034 ORTHO05D000037 2.0e-12 75.9 99 40.4
FAN21G0344 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.0e-12 75.9 98 41.8
FAN25G1683 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.0e-12 75.9 98 41.8
FAN27G0091 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.0e-12 75.9 98 41.8
EL10Ac4g08596 Beta vulgaris HOM05D000034 ORTHO05D000277 2.7e-12 75.5 90 43.3
EL10Ac9g22348 Beta vulgaris HOM05D000034 ORTHO05D000277 2.7e-12 75.5 90 43.3
AUR62002125 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.7e-12 75.5 91 44.0
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.7e-12 75.5 91 44.0
AUR62017438 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.7e-12 75.5 91 44.0
AUR62019987 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.7e-12 75.5 91 44.0
AUR62025060 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.7e-12 75.5 91 44.0
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.7e-12 75.5 91 44.0
AUR62041492 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.7e-12 75.5 91 44.0
AUR62009575 Chenopodium quinoa HOM05D001290 ORTHO05D000037 3.5e-12 75.1 100 37.0
AUR62025847 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.5e-12 75.1 102 40.2
AUR62028531 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.5e-12 75.1 91 44.0
FAN22G1221 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.5e-12 75.1 89 41.6
FAN27G3399 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.5e-12 75.1 89 41.6
Atru.chr6.37 Acer truncatum HOM05D000034 ORTHO05D000037 4.6e-12 74.7 97 39.2
CANSAT80G0212 Cannabis sativa HOM05D008011 ORTHO05D000277 4.6e-12 74.7 100 34.0
FAN08G2404 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.6e-12 74.7 101 36.6
Os02g0328500 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 4.6e-12 74.7 95 41.1
Os04g0590366 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 4.6e-12 74.7 95 41.1
Ah.03g144290 Amaranthus hybridus HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
AUR62007332 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.8e-12 73.9 91 42.9
AUR62007737 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 44.0
AUR62008289 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
AUR62014937 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.8e-12 73.9 91 42.9
AUR62022569 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
AUR62030444 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.8e-12 73.9 91 42.9
AUR62030491 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
AUR62041010 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
AUR62041276 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.8e-12 73.9 91 42.9
MD06G1073100 Malus domestica HOM05D008011 ORTHO05D000277 7.8e-12 73.9 90 40.0
Zm00001eb031320 Zea mays HOM05D000034 ORTHO05D000277 7.8e-12 73.9 96 35.4
Zm00001eb044120 Zea mays HOM05D000034 ORTHO05D000277 7.8e-12 73.9 96 36.5
Zm00001eb092060 Zea mays HOM05D000034 ORTHO05D000277 7.8e-12 73.9 96 36.5
Ah.06g189260 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.0e-11 73.6 90 41.1
EL10Ac2g03585 Beta vulgaris HOM05D000034 ORTHO05D000277 1.0e-11 73.6 97 40.2
EL10Ac8g19887 Beta vulgaris HOM05D000034 ORTHO05D000037 1.0e-11 73.6 98 40.8
Zm00001eb055610 Zea mays HOM05D000034 ORTHO05D000277 1.0e-11 73.6 95 41.1
Zm00001eb430660 Zea mays HOM05D000034 ORTHO05D000277 1.0e-11 73.6 96 36.5
Ah.09g223970 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.3e-11 73.2 90 41.1
Ah.14g081720 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.3e-11 73.2 90 41.1
AUR62004373 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.3e-11 73.2 100 40.0
FAN05G2985 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.3e-11 73.2 98 40.8
ECA240G4451 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.7e-11 72.8 40 87.5
FAN04G0445 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.7e-11 72.8 101 36.6
Zm00001eb055250 Zea mays HOM05D000034 ORTHO05D000277 1.7e-11 72.8 96 36.5
EL10Ac2g03033 Beta vulgaris HOM05D000034 ORTHO05D000277 2.3e-11 72.4 104 33.7
AUR62008330 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-11 72.4 102 39.2
AUR62010683 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-11 72.4 102 39.2
AUR62024632 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.3e-11 72.4 102 39.2
CANSAT56G2768 Cannabis sativa HOM05D008011 ORTHO05D000277 3.0e-11 72.0 99 36.4
AUR62032529 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.0e-11 72.0 91 41.8
FAN13G0966 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.0e-11 72.0 101 36.6
Zm00001eb030860 Zea mays HOM05D000034 ORTHO05D000277 3.0e-11 72.0 96 35.4
Zm00001eb153640 Zea mays HOM05D000034 ORTHO05D000277 3.0e-11 72.0 96 35.4
Zm00001eb222110 Zea mays HOM05D000034 ORTHO05D000277 3.0e-11 72.0 90 37.8
Ah.01g007900 Amaranthus hybridus HOM05D000034 ORTHO05D000277 3.9e-11 71.6 90 41.1
EL10Ac2g03259 Beta vulgaris HOM05D000034 ORTHO05D000037 3.9e-11 71.6 90 40.0
AUR62032519 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.9e-11 71.6 99 41.4
EL10Ac4g08431 Beta vulgaris HOM05D000034 ORTHO05D000277 5.0e-11 71.2 98 38.8
AUR62029263 Chenopodium quinoa HOM05D000034 ORTHO05D000001 6.6e-11 70.9 97 39.2
AUR62042450 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.6e-11 70.9 99 39.4
Zm00001eb137320 Zea mays HOM05D000034 ORTHO05D000277 8.6e-11 70.5 91 41.8
Ah.01g005960 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.1e-10 70.1 90 40.0
AUR62006211 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.5e-10 69.7 89 41.6
AUR62028369 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.5e-10 69.7 98 40.8
Zm00001eb029080 Zea mays HOM05D001299 ORTHO05D000277 1.9e-10 69.3 97 38.1
EL10Ac4g07654 Beta vulgaris HOM05D000034 ORTHO05D000277 3.3e-10 68.6 104 36.5
Zm00001eb143610 Zea mays HOM05D000034 ORTHO05D000277 4.3e-10 68.2 96 33.3
Zm00001eb329420 Zea mays HOM05D000034 ORTHO05D000277 4.3e-10 68.2 101 34.7
AUR62039697 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.3e-10 67.4 98 37.8
AUR62044295 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.3e-10 67.4 98 37.8
DCAR_005292 Daucus carota HOM05D000034 ORTHO05D000277 7.3e-10 67.4 88 39.8
Nn1g06971 Nelumbo nucifera HOM05D000034 ORTHO05D000277 9.5e-10 67.0 67 44.8
Zm00001eb080450 Zea mays HOM05D000034 ORTHO05D000277 9.5e-10 67.0 96 33.3
EL10Ac9g22401 Beta vulgaris HOM05D000034 ORTHO05D000037 1.2e-09 66.6 88 40.9
AUR62040452 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.2e-09 66.6 98 39.8
AUR62008661 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.6e-09 66.2 105 37.1
AUR62025908 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.6e-09 66.2 101 37.6
PSO210G6693 Papaver somniferum HOM05D000034 ORTHO05D000277 2.1e-09 65.9 83 41.0
EL10Ac5g12424 Beta vulgaris HOM05D000034 ORTHO05D000277 2.8e-09 65.5 85 44.7
AUR62035827 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.8e-09 65.5 91 39.6
DCAR_022908 Daucus carota HOM05D000034 ORTHO05D000277 2.8e-09 65.5 95 35.8
PSO017G1737 Papaver somniferum HOM05D000034 ORTHO05D000037 2.8e-09 65.5 83 41.0
EL10Ac1g00820 Beta vulgaris HOM05D000034 ORTHO05D000277 3.6e-09 65.1 104 31.7
AUR62040605 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.6e-09 65.1 86 43.0
PSO675G2744 Papaver somniferum HOM05D000034 ORTHO05D000037 3.6e-09 65.1 83 41.0
EL10Ac3g06350 Beta vulgaris HOM05D000034 ORTHO05D000037 6.2e-09 64.3 73 43.8
AUR62026606 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.2e-09 64.3 94 40.4
PSO541G2803 Papaver somniferum HOM05D000034 ORTHO05D000277 6.2e-09 64.3 83 41.0
EL10Ac3g06860 Beta vulgaris HOM05D000034 ORTHO05D000277 8.0e-09 63.9 72 41.7
AUR62043288 Chenopodium quinoa HOM05D000034 ORTHO05D000277 8.0e-09 63.9 93 41.9
Os11g0205200 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 8.0e-09 63.9 91 38.5
PSO063G6367 Papaver somniferum HOM05D000034 ORTHO05D000277 1.1e-08 63.5 83 39.8
AUR62041761 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.8e-08 62.8 93 39.8
Hund23417 Selenicereus undatus HOM05D000034 ORTHO05D000277 1.8e-08 62.8 80 37.5
EL10Ac8g20046 Beta vulgaris HOM05D000034 ORTHO05D000277 4.0e-08 61.6 100 32.0
EL10Ac9g21126 Beta vulgaris HOM05D000034 ORTHO05D000037 4.0e-08 61.6 63 49.2
Os07g0647600 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 5.2e-08 61.2 101 36.6
AUR62041774 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.8e-08 60.8 81 40.7
AUR62044007 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.8e-08 60.8 81 40.7
Atru.chr12.1422 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-07 59.7 103 33.0
Atru.chr1.1500 Acer truncatum HOM05D000034 ORTHO05D000037 2.0e-07 59.3 103 33.0
AUR62031611 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 58.9 72 41.7
Actinidia33700 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.4e-07 58.5 92 33.7
AUR62004197 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.4e-07 58.2 62 43.5
FAN15G3570 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.4e-07 58.2 108 37.0
FAN16G1608 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.4e-07 58.2 76 36.8
RcHm_v2.0_Chr1g0343671 Rosa chinensis HOM05D000034 ORTHO05D000277 4.4e-07 58.2 105 38.1
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.8e-07 57.8 111 33.3
EL10Ac3g06576 Beta vulgaris HOM05D000034 ORTHO05D000037 7.5e-07 57.4 84 38.1
Atru.chr4.1088 Acer truncatum HOM05D000034 ORTHO05D000037 9.8e-07 57.0 98 31.6
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 9.8e-07 57.0 98 31.6
EL10Ac7g17833 Beta vulgaris HOM05D000034 ORTHO05D000277 9.8e-07 57.0 72 40.3
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.8e-07 57.0 111 32.4
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.8e-07 57.0 111 32.4
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.8e-07 57.0 111 32.4
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.8e-07 57.0 111 32.4
AUR62004258 Chenopodium quinoa HOM05D000034 ORTHO05D000277 9.8e-07 57.0 74 40.5
RcHm_v2.0_Chr5g0072391 Rosa chinensis HOM05D000034 ORTHO05D000277 9.8e-07 57.0 109 36.7
AUR62030450 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.3e-06 56.6 56 48.2
FAN07G2407 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.3e-06 56.6 71 38.0
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.9e-06 55.5 110 30.9
Actinidia05901 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.9e-06 54.7 86 34.9
PSO017G7284 Papaver somniferum HOM05D000034 ORTHO05D000277 4.9e-06 54.7 85 32.9
PSO478G0310 Papaver somniferum HOM05D000034 ORTHO05D000277 4.9e-06 54.7 85 32.9
FvH4_6g28113 Fragaria vesca HOM05D008011 ORTHO05D000277 6.4e-06 54.3 39 64.1
vmacro00828 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.4e-06 54.3 92 30.4
FAN20G1132 Fragaria x ananassa HOM05D008011 ORTHO05D000277 8.3e-06 53.9 48 58.3
Prupe.4G257700 Prunus persica HOM05D000034 ORTHO05D000277 8.3e-06 53.9 105 32.4


User provided reference genes

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