Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 7.2e-147 523.9 257 100.0
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 6.5e-108 394.4 246 76.4
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 4.0e-97 358.6 236 74.6
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 4.1e-86 322.0 238 66.0
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 7.8e-85 317.8 251 63.3
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 6.6e-84 314.7 240 65.0
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.5e-83 313.5 239 64.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.5e-83 313.5 240 65.0
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 3.3e-83 312.4 240 64.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 1.8e-81 306.6 229 65.5
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.6e-80 302.8 234 63.7
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.6e-80 302.8 229 66.4
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 9.8e-80 300.8 240 60.4
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 8.3e-79 297.7 239 62.3
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 1.6e-77 293.5 240 62.1
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 6.0e-77 291.6 230 63.0
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 7.8e-77 291.2 238 60.9
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 7.8e-77 291.2 242 61.2
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.9e-76 288.9 232 61.6
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 8.6e-76 287.7 241 58.5
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 2.5e-75 286.2 254 59.4
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.6e-74 283.5 230 61.3
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.6e-74 283.5 244 57.0
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 3.1e-73 279.3 233 57.9
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 2.6e-72 276.2 223 61.0
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.6e-72 276.2 276 54.0
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 3.4e-72 275.8 233 61.4
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 3.4e-72 275.8 232 59.5
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.8e-71 272.3 246 56.5
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.3e-68 263.8 245 56.3
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.5e-67 259.6 248 54.4
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 7.3e-67 258.1 240 55.4
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 7.6e-64 248.1 240 53.8
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.3e-63 247.3 234 53.4
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 4.9e-63 245.4 238 54.6
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 8.4e-63 244.6 245 53.1
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 8.4e-63 244.6 237 54.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 1.4e-62 243.8 236 53.0
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 3.2e-62 242.7 245 52.7
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 3.2e-62 242.7 234 54.3
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 4.2e-62 242.3 236 53.8
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 7.1e-62 241.5 238 53.4
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.7e-60 236.9 237 53.2
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 3.9e-60 235.7 236 52.5
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.1e-60 235.3 236 52.1
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 8.7e-60 234.6 239 53.1
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 1.5e-59 233.8 252 50.0
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.9e-59 233.4 231 53.7
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.9e-59 233.4 248 51.2
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 5.6e-59 231.9 236 51.7
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.3e-58 230.7 239 51.9
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 5.8e-56 221.9 237 51.1
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.2e-55 219.9 263 46.8
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 2.9e-55 219.5 245 47.3
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.1e-54 217.6 259 44.8
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 4.2e-54 215.7 239 47.3
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.4e-54 215.3 239 47.3
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 9.3e-54 214.5 231 50.6
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 4.6e-53 212.2 239 46.9
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 7.9e-53 211.5 243 48.6
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.0e-52 211.1 239 46.4
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.3e-52 210.7 271 43.5
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.5e-51 207.2 238 47.1
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 1.9e-51 206.8 255 44.7
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 2.5e-51 206.5 238 48.3
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 3.3e-51 206.1 239 48.1
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 4.3e-51 205.7 212 51.4
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 9.6e-51 204.5 244 48.8
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.8e-50 202.2 231 47.6
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 6.2e-50 201.8 241 47.7
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 1.8e-49 200.3 241 46.9
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 2.4e-49 199.9 238 45.8
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 6.9e-49 198.4 240 47.1
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.2e-48 197.6 240 47.5
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 2.0e-48 196.8 246 46.7
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 2.6e-48 196.4 240 46.7
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 4.5e-48 195.7 236 47.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.2e-47 193.4 238 45.4
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 6.4e-47 191.8 241 45.6
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 6.4e-47 191.8 241 45.6
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.4e-46 190.7 237 43.9
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 1.4e-46 190.7 150 60.7
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 5.5e-46 188.7 261 42.5
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 4.6e-45 185.7 171 55.6
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.3e-44 184.1 298 37.9
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 6.2e-42 175.3 247 43.3
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.4e-41 174.1 247 42.1
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.8e-41 173.7 141 61.7
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.6e-40 169.9 141 59.6
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 4.5e-40 169.1 287 38.3
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 7.9e-37 158.3 316 32.9
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 7.4e-35 151.8 234 39.7
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 2.1e-34 150.2 125 60.8
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.4e-33 147.5 237 39.7
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.8e-33 147.1 198 47.0
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.2e-32 144.4 179 46.4
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 1.2e-32 144.4 99 68.7
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.8e-28 130.6 139 49.6
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 9.7e-27 124.8 141 47.5
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.0e-24 117.1 141 44.7
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 5.5e-22 109.0 190 34.2
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.8e-20 104.0 96 53.1
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 5.5e-14 82.4 226 27.4
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 3.0e-12 76.6 116 38.8
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 7.4e-11 72.0 57 63.2
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 7.0e-09 65.5 261 24.9
Cpa.g.sc28.27 Carica papaya HOM05D007273 ORTHO05D009230 1.9e-06 57.4 62 48.4
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 2.5e-06 57.0 267 23.2
unitig_578.g16000 Utricularia gibba HOM05D007003 ORTHO05D008499 9.4e-06 55.1 75 37.3


User provided reference genes

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