Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0263 Erigeron canadensis HOM05D001192 ORTHO05D010160 1.0e-187 659.8 319 100.0
ECA233G4194 Erigeron canadensis HOM05D001192 ORTHO05D010160 1.2e-71 274.2 366 49.2
ECA233G6169 Erigeron canadensis HOM05D001192 ORTHO05D010160 3.8e-65 252.7 355 49.3
Lsat_1_v5_gn_3_112881 Lactuca sativa HOM05D001192 ORTHO05D010160 1.7e-36 157.5 342 34.8
Lsat_1_v5_gn_3_113520 Lactuca sativa HOM05D001192 ORTHO05D010160 2.9e-36 156.8 317 36.0
ECA247G3046 Erigeron canadensis HOM05D001192 ORTHO05D010160 2.4e-35 153.7 333 36.6
Lsat_1_v5_gn_3_112301 Lactuca sativa HOM05D001192 ORTHO05D010160 2.4e-35 153.7 315 35.6
Lsat_1_v5_gn_3_113880 Lactuca sativa HOM05D001192 ORTHO05D010160 2.0e-34 150.6 311 36.0
ECA247G3259 Erigeron canadensis HOM05D001192 ORTHO05D010160 4.6e-34 149.4 329 37.4
Lsat_1_v5_gn_3_112381 Lactuca sativa HOM05D001192 ORTHO05D010160 7.8e-34 148.7 311 35.4
Lsat_1_v5_gn_3_112361 Lactuca sativa HOM05D001192 ORTHO05D010160 1.3e-33 147.9 314 36.0
Lsat_1_v5_gn_3_113900 Lactuca sativa HOM05D001192 ORTHO05D010160 3.9e-33 146.4 308 33.4
HanXRQChr03g0090711 Helianthus annuus HOM05D001192 ORTHO05D010160 4.3e-32 142.9 344 34.9
Lsat_1_v5_gn_3_113540 Lactuca sativa HOM05D001192 ORTHO05D010160 5.6e-32 142.5 314 34.1
Lsat_1_v5_gn_3_114020 Lactuca sativa HOM05D001192 ORTHO05D010160 1.8e-30 137.5 321 33.3
Lsat_1_v5_gn_3_112541 Lactuca sativa HOM05D001192 ORTHO05D010160 8.9e-30 135.2 321 33.3
Lsat_1_v5_gn_3_113660 Lactuca sativa HOM05D001192 ORTHO05D010160 9.8e-29 131.7 313 36.1
Lsat_1_v5_gn_3_112621 Lactuca sativa HOM05D001192 ORTHO05D010160 2.2e-28 130.6 321 32.1
ECA236G1843 Erigeron canadensis HOM05D001192 ORTHO05D010160 2.9e-28 130.2 318 36.2
ECA238G4353 Erigeron canadensis HOM05D001192 ORTHO05D010160 1.3e-25 121.3 320 32.2
QL01p017691 Quercus lobata HOM05D001192 ORTHO05D002290 3.2e-19 100.1 338 27.5
CiPaw.14G115000 Carya illinoinensis HOM05D001192 ORTHO05D002290 5.4e-19 99.4 340 27.4
ECA247G3492 Erigeron canadensis HOM05D001192 ORTHO05D010160 8.6e-17 92.0 331 29.9
Dinv15410 Davidia involucrata HOM05D001192 ORTHO05D010160 1.5e-16 91.3 346 26.3
CiPaw.13G152500 Carya illinoinensis HOM05D001192 ORTHO05D002290 7.3e-16 89.0 348 28.7
Gorai.006G125400 Gossypium raimondii HOM05D001192 ORTHO05D002290 2.1e-15 87.4 340 28.8
Potri.009G047600 Populus trichocarpa HOM05D001192 ORTHO05D002290 3.6e-15 86.7 332 27.1
Gohir.A09G111000 Gossypium hirsutum HOM05D001192 ORTHO05D002290 4.7e-15 86.3 340 28.5
Cfa009836 Carpinus fangiana HOM05D001192 ORTHO05D002290 8.1e-15 85.5 342 27.5
Hma1.2p1_0115F.1_g056030 Hydrangea macrophylla HOM05D001192 ORTHO05D010160 3.1e-14 83.6 295 26.4
ECA240G4265 Erigeron canadensis HOM05D001192 ORTHO05D010160 4.0e-14 83.2 124 41.1
Sabra09G0034900 Salix brachista HOM05D001192 ORTHO05D002290 5.2e-14 82.8 330 27.6
Thecc.09G244200 Theobroma cacao HOM05D001192 ORTHO05D002290 5.2e-14 82.8 341 27.3
ClCG03G012870 Citrullus lanatus HOM05D001192 ORTHO05D002290 8.9e-14 82.0 328 25.9
Haze_23203 Corylus avellana HOM05D001192 ORTHO05D002290 8.9e-14 82.0 339 25.7
Duzib168G1589 Durio zibethinus HOM05D001192 ORTHO05D002290 1.2e-13 81.6 337 26.4
Gohir.D09G107700 Gossypium hirsutum HOM05D001192 ORTHO05D002290 1.5e-13 81.3 340 28.2
Hma1.2p1_0115F.1_g056035 Hydrangea macrophylla HOM05D001192 ORTHO05D002290 1.5e-13 81.3 352 25.3
Sed0004813 Sechium edule HOM05D001192 ORTHO05D002290 1.5e-13 81.3 341 27.0
Manes.02G141400 Manihot esculenta HOM05D001192 ORTHO05D002290 5.8e-13 79.3 331 26.6
Hma1.2p1_2007F.1_g310920 Hydrangea macrophylla HOM05D001192 ORTHO05D002290 1.7e-12 77.8 354 24.9
ECA240G2306 Erigeron canadensis HOM05D001192 ORTHO05D010160 2.2e-12 77.4 141 38.3
COL.COLO4_07228 Corchorus olitorius HOM05D001192 ORTHO05D002290 2.9e-12 77.0 339 25.4
MELO3C015149.2 Cucumis melo HOM05D001192 ORTHO05D002290 6.4e-12 75.9 337 24.9
Lsat_1_v5_gn_2_25220 Lactuca sativa HOM05D001192 ORTHO05D002290 8.4e-12 75.5 300 27.7
PGR102G1754 Punica granatum HOM05D001192 ORTHO05D002290 8.4e-12 75.5 323 26.3
Rhsim13G0214100 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.1e-11 75.1 275 25.5
CANSAT35G0784 Cannabis sativa HOM05D001192 ORTHO05D002290 3.2e-11 73.6 326 25.5
ECA233G5666 Erigeron canadensis HOM05D001192 ORTHO05D010160 3.2e-11 73.6 146 35.6
Dinv07797 Davidia involucrata HOM05D001192 ORTHO05D010160 4.1e-11 73.2 327 22.6
Rhsim13G0214700 Rhododendron simsii HOM05D001192 ORTHO05D010160 4.1e-11 73.2 339 26.3
CsaV3_1G043180 Cucumis sativus L. HOM05D001192 ORTHO05D002290 7.1e-11 72.4 333 24.6
Dinv08776 Davidia involucrata HOM05D001192 ORTHO05D002290 7.1e-11 72.4 337 26.4
Rhsim13G0214500 Rhododendron simsii HOM05D001192 ORTHO05D010160 9.2e-11 72.0 338 26.0
ECA236G4012 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.6e-10 71.2 98 41.8
Actinidia16367 Actinidia chinensis HOM05D000073 ORTHO05D000033 2.1e-10 70.9 183 28.4
GSVIVG01037246001 Vitis vinifera HOM05D001192 ORTHO05D002290 2.7e-10 70.5 329 25.8
Dinv36189 Davidia involucrata HOM05D001192 ORTHO05D010160 7.8e-10 68.9 315 27.0
Rhsim13G0215200 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.0e-09 68.6 337 24.9
Ciclev10015553m.g Citrus clementina HOM05D001192 ORTHO05D002290 1.3e-09 68.2 328 23.2
Rhsim13G0214600 Rhododendron simsii HOM05D001192 ORTHO05D010160 3.0e-09 67.0 346 23.4
CSS0005311 Camellia sinensis var. sinensis HOM05D001192 ORTHO05D002290 5.1e-09 66.2 349 22.9
Os05g0490300 Oryza sativa ssp. japonica HOM05D001192 ORTHO05D002290 5.1e-09 66.2 335 25.4
Duzib168G0794 Durio zibethinus HOM05D001192 ORTHO05D002290 6.6e-09 65.9 252 26.6
Eucgr.B03721 Eucalyptus grandis HOM05D001192 ORTHO05D002290 6.6e-09 65.9 322 24.2
Rhsim13G0215600 Rhododendron simsii HOM05D001192 ORTHO05D010160 6.6e-09 65.9 221 24.9
Rhsim13G0213600 Rhododendron simsii HOM05D001192 ORTHO05D010160 8.6e-09 65.5 307 22.5
CSS0046911 Camellia sinensis var. sinensis HOM05D001192 ORTHO05D002290 1.9e-08 64.3 358 23.2
ATR0787G224 Amborella trichopoda HOM05D001192 ORTHO05D002290 4.3e-08 63.2 334 23.1
EL10Ac4g10119 Beta vulgaris HOM05D001192 ORTHO05D002290 4.3e-08 63.2 375 20.8
EL10Ac4g10169 Beta vulgaris HOM05D001192 ORTHO05D002290 7.3e-08 62.4 375 20.8
Rhsim13G0213300 Rhododendron simsii HOM05D001192 ORTHO05D010160 7.3e-08 62.4 339 23.6
Rhsim13G0215700 Rhododendron simsii HOM05D001192 ORTHO05D010160 7.3e-08 62.4 267 25.1
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 1.2e-07 61.6 306 24.8
Rhsim13G0213900 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.2e-07 61.6 316 23.1
Dinv42869 Davidia involucrata HOM05D001192 ORTHO05D010160 1.6e-07 61.2 345 24.3
Rhsim13G0214400 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.6e-07 61.2 317 22.7
ECA248G1305 Erigeron canadensis HOM05D030209 ORTHO05D010160 2.1e-07 60.8 316 26.6
HanXRQChr17g0542411 Helianthus annuus HOM05D001192 ORTHO05D002290 2.1e-07 60.8 306 24.8
Rhsim13G0213800 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.1e-07 60.8 287 25.4
Dinv07795 Davidia involucrata HOM05D001192 ORTHO05D010160 1.4e-06 58.2 211 26.5
Cc01_g05700 Coffea canephora HOM05D001192 ORTHO05D002290 5.2e-06 56.2 337 23.4
ECA238G1040 Erigeron canadensis HOM05D001192 ORTHO05D010160 5.2e-06 56.2 134 31.3
Dinv43230 Davidia involucrata HOM05D001192 ORTHO05D010160 6.8e-06 55.8 319 24.8
Dinv43231 Davidia involucrata HOM05D001192 ORTHO05D010160 6.8e-06 55.8 319 24.5


User provided reference genes

Program Settings