Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.3e-211 739.6 388 100.0
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 1.0e-168 597.0 388 78.6
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 1.8e-162 576.2 377 78.0
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 6.6e-136 488.0 382 66.5
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 4.7e-134 481.9 380 63.9
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 8.3e-131 471.1 383 62.9
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 8.3e-131 471.1 381 64.6
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 1.9e-130 469.9 396 61.1
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 3.2e-130 469.2 382 63.6
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 5.4e-130 468.4 395 62.0
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 7.0e-130 468.0 376 65.7
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 9.2e-130 467.6 381 61.9
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.0e-129 466.5 395 62.0
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 2.7e-129 466.1 400 61.2
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 3.5e-129 465.7 397 63.0
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 1.0e-128 464.2 395 60.5
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 1.3e-128 463.8 378 64.0
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 2.3e-128 463.0 387 62.3
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 2.3e-128 463.0 395 61.5
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 3.0e-128 462.6 396 61.6
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 3.0e-128 462.6 404 60.4
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.0e-128 462.6 379 62.3
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 8.6e-128 461.1 397 59.7
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 1.9e-127 459.9 384 61.5
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 4.3e-127 458.8 395 61.0
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 5.6e-127 458.4 397 59.4
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 5.6e-127 458.4 395 60.3
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 9.5e-127 457.6 391 61.1
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 1.2e-126 457.2 397 61.0
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 3.6e-126 455.7 383 62.9
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 6.2e-126 454.9 395 60.0
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 6.2e-126 454.9 380 60.5
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 1.1e-125 454.1 395 60.3
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.1e-125 454.1 401 60.3
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 1.4e-125 453.8 394 60.7
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.4e-125 453.8 380 61.6
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 8.9e-125 451.1 383 60.6
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 1.2e-124 450.7 396 60.1
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 2.6e-124 449.5 396 58.3
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 2.6e-124 449.5 428 57.2
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 5.8e-124 448.4 399 60.9
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 7.5e-124 448.0 380 61.1
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 1.3e-123 447.2 366 63.4
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 1.7e-123 446.8 388 61.1
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 2.9e-123 446.0 397 58.9
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 3.7e-123 445.7 383 62.4
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 4.9e-123 445.3 382 62.6
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 6.4e-123 444.9 381 62.2
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 8.3e-123 444.5 381 61.7
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 2.4e-122 443.0 397 59.9
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 3.2e-122 442.6 401 58.9
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 3.2e-122 442.6 385 61.8
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 4.6e-121 438.7 394 58.6
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 6.0e-121 438.3 404 57.7
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 7.8e-121 438.0 381 60.4
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 1.3e-120 437.2 394 58.4
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 1.1e-119 434.1 416 57.2
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 5.6e-119 431.8 406 57.1
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 1.6e-118 430.3 381 61.4
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 2.1e-118 429.9 394 57.4
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 4.7e-118 428.7 382 59.2
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 6.2e-118 428.3 391 58.1
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 8.1e-118 427.9 381 59.3
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 5.2e-117 425.2 378 59.8
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 1.2e-116 424.1 386 60.4
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.5e-116 423.7 381 59.6
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 3.4e-116 422.5 381 60.6
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 3.4e-116 422.5 381 60.6
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 4.4e-116 422.2 395 57.5
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 5.8e-116 421.8 383 60.3
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 5.8e-116 421.8 379 60.4
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 3.7e-115 419.1 379 58.6
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.9e-115 418.7 403 56.3
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 6.4e-115 418.3 394 56.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 6.4e-115 418.3 377 59.2
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 2.4e-114 416.4 381 59.6
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 3.2e-114 416.0 386 58.8
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 7.1e-114 414.8 379 59.9
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 7.1e-114 414.8 379 59.9
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 3.9e-112 409.1 381 58.3
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 6.6e-112 408.3 379 57.5
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 8.6e-112 407.9 375 57.9
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 1.9e-111 406.8 375 57.9
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 2.5e-111 406.4 400 55.0
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 3.3e-111 406.0 459 50.5
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 4.3e-111 405.6 386 55.7
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 3.6e-110 402.5 406 53.0
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 4.7e-110 402.1 346 61.3
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 8.1e-110 401.4 382 55.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.4e-109 399.8 388 57.5
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 5.2e-109 398.7 346 61.6
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 1.5e-108 397.1 359 59.6
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 1.7e-107 393.7 383 55.4
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 4.2e-106 389.0 357 59.4
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 2.7e-105 386.3 361 57.9
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 1.9e-103 380.2 388 55.9
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 1.4e-101 374.0 355 57.5
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 1.2e-100 370.9 336 59.2
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 3.5e-97 359.4 401 53.4
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 2.3e-96 356.7 306 63.4
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 3.9e-96 355.9 415 48.9
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 2.7e-81 306.6 301 53.2
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 6.0e-81 305.4 248 64.1
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.7e-75 287.3 401 43.6
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.7e-75 287.3 401 43.6
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.9e-75 285.8 334 47.3
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 2.7e-73 280.0 389 43.2
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 3.1e-69 266.5 382 42.9
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.8e-64 250.8 157 78.3
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 1.5e-39 167.9 394 32.5
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.8e-32 144.4 119 63.0
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 1.8e-29 134.4 119 60.5
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 2.4e-29 134.0 162 46.9
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 1.0e-27 128.6 411 29.9
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 8.6e-19 99.0 87 55.2
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 1.6e-17 94.7 146 40.4
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 2.3e-16 90.9 190 36.3
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 7.0e-13 79.3 50 74.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 3.0e-11 73.9 52 63.5
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 6.6e-11 72.8 50 68.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 6.6e-11 72.8 50 68.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.2e-09 66.2 146 36.3
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 3.4e-07 60.5 262 24.8
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 8.3e-06 55.8 46 58.7


User provided reference genes

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