Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.9e-87 324.3 214 100.0
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 5.4e-55 218.4 213 58.7
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.8e-47 193.4 205 66.8
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 9.2e-47 191.0 222 66.7
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.0e-37 161.0 159 68.6
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 3.0e-37 159.5 192 56.8
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 4.0e-18 95.9 161 37.9
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 8.9e-18 94.7 194 38.1
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 4.9e-16 89.0 161 46.6
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 7.1e-15 85.1 147 31.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.0e-14 82.0 133 47.4
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.0e-13 81.3 156 39.7
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 1.3e-13 80.9 149 43.0
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-13 80.5 158 38.6
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.5e-12 77.4 134 38.8
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.5e-12 76.6 134 41.0
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.5e-12 76.6 134 38.1
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.3e-12 75.9 134 35.8
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.2e-11 74.3 199 38.7
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-11 74.3 106 49.1
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.1e-11 73.6 132 42.4
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.1e-11 73.6 129 31.8
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 2.1e-11 73.6 189 34.9
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.8e-11 73.2 155 38.7
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-11 72.8 107 48.6
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.6e-11 72.8 132 45.5
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 4.7e-11 72.4 152 38.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.4e-10 70.9 174 36.8
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.8e-10 70.5 124 37.9
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.4e-10 70.1 162 39.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.4e-10 70.1 130 42.3
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.4e-10 70.1 172 35.5
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 3.1e-10 69.7 146 39.0
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 3.1e-10 69.7 133 46.6
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.0e-10 69.3 141 35.5
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.2e-10 68.9 197 35.0
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.9e-10 68.6 106 47.2
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 6.9e-10 68.6 122 27.9
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 6.9e-10 68.6 97 53.6
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.2e-09 67.8 107 43.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 2.0e-09 67.0 133 41.4
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.0e-09 67.0 128 41.4
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 2.0e-09 67.0 102 48.0
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.6e-09 66.6 137 45.3
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 4.4e-09 65.9 147 41.5
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.4e-09 65.9 135 44.4
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 5.8e-09 65.5 172 34.9
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.8e-09 65.5 197 34.0
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.6e-09 65.1 107 47.7
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.6e-09 65.1 198 34.8
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 7.6e-09 65.1 179 33.0
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 9.9e-09 64.7 107 48.6
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 9.9e-09 64.7 195 33.8
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 9.9e-09 64.7 128 39.1
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 9.9e-09 64.7 106 31.1
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 9.9e-09 64.7 128 50.8
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 1.3e-08 64.3 135 40.0
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 1.3e-08 64.3 107 33.6
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 2.2e-08 63.5 194 39.2
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.2e-08 63.5 186 28.0
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.9e-08 63.2 124 43.5
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 3.8e-08 62.8 134 28.4
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 3.8e-08 62.8 121 40.5
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.8e-08 62.8 107 48.6
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 3.8e-08 62.8 102 52.0
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.9e-08 62.4 150 32.7
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 6.4e-08 62.0 98 45.9
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 8.4e-08 61.6 148 38.5
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 8.4e-08 61.6 136 41.2
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-07 61.2 108 30.6
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.1e-07 61.2 104 46.2
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.4e-07 60.8 171 35.1
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.2e-07 59.7 103 27.2
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 3.2e-07 59.7 179 35.2
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 3.2e-07 59.7 121 39.7
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 4.2e-07 59.3 106 47.2
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 5.4e-07 58.9 160 31.9
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 5.4e-07 58.9 128 39.1
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 7.1e-07 58.5 106 40.6
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.1e-07 58.5 106 40.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.1e-07 58.5 128 43.0
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 7.1e-07 58.5 158 34.8
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 9.3e-07 58.2 103 46.6
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-06 57.8 120 41.7
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.2e-06 57.8 171 36.8
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 130 42.3
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 1.6e-06 57.4 160 40.6
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-06 56.6 96 30.2
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 3.5e-06 56.2 127 44.9
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.6e-06 55.8 209 32.1
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 6.0e-06 55.5 104 43.3
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 7.8e-06 55.1 108 38.0
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 7.8e-06 55.1 130 38.5
Solyc04g074770.2 Solanum lycopersicum HOM05D012586 ORTHO05D012196 7.8e-06 55.1 192 32.8


User provided reference genes

Program Settings