Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 9.9e-186 653.3 327 100.0
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 5.0e-153 544.7 325 82.5
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 2.6e-149 532.3 326 79.8
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 3.7e-124 448.7 328 66.8
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 1.1e-123 447.2 330 66.4
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 9.2e-123 444.1 326 64.7
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 1.7e-121 439.9 326 65.3
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.3e-121 439.5 329 64.4
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.3e-121 439.5 326 65.6
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 3.9e-121 438.7 342 64.9
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 6.6e-121 438.0 326 65.3
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 8.6e-121 437.6 326 63.8
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 1.1e-120 437.2 329 65.0
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 1.9e-120 436.4 326 66.6
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.9e-120 436.4 328 66.8
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 2.5e-120 436.0 328 67.4
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 7.3e-120 434.5 328 67.1
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 9.5e-120 434.1 326 65.0
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 9.5e-120 434.1 358 61.2
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 9.5e-120 434.1 319 66.8
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 9.5e-120 434.1 328 66.2
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 6.1e-119 431.4 323 66.3
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 1.4e-118 430.3 328 65.5
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 3.1e-118 429.1 329 64.4
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 3.1e-118 429.1 329 64.7
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.0e-118 428.7 328 66.2
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 5.2e-118 428.3 326 65.0
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 8.9e-118 427.6 329 64.1
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 8.9e-118 427.6 329 64.1
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 2.6e-117 426.0 329 63.8
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.4e-117 425.6 319 64.9
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 4.4e-117 425.2 329 63.8
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 7.5e-117 424.5 326 64.7
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 7.5e-117 424.5 325 62.8
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 9.8e-117 424.1 326 64.4
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 9.8e-117 424.1 329 64.1
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 1.7e-116 423.3 326 64.7
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 2.9e-116 422.5 331 63.1
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 2.9e-116 422.5 329 64.1
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 3.7e-116 422.2 329 63.8
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 3.7e-116 422.2 329 63.8
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 3.7e-116 422.2 323 65.9
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 3.7e-116 422.2 329 64.1
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 4.9e-116 421.8 323 65.3
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 6.4e-116 421.4 361 59.0
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 8.3e-116 421.0 326 63.8
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 2.4e-115 419.5 329 62.3
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 2.4e-115 419.5 326 63.5
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 3.2e-115 419.1 329 62.6
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 5.4e-115 418.3 326 63.5
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 7.0e-115 417.9 329 62.0
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 9.2e-115 417.5 328 64.0
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 9.2e-115 417.5 327 64.2
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 1.2e-114 417.2 332 62.0
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 1.2e-114 417.2 359 58.8
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 2.7e-114 416.0 329 61.7
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 3.5e-114 415.6 329 62.0
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 4.6e-114 415.2 326 63.5
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 2.3e-113 412.9 329 62.9
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 6.6e-113 411.4 331 62.2
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 8.6e-113 411.0 325 60.9
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.5e-112 410.2 323 62.8
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 1.9e-112 409.8 308 66.6
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 2.5e-112 409.5 323 63.2
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 2.5e-112 409.5 319 63.3
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 2.8e-111 406.0 315 62.2
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 2.8e-111 406.0 315 62.5
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 2.3e-110 402.9 302 65.2
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 4.0e-110 402.1 320 61.2
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.2e-109 400.6 326 62.6
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.2e-109 400.6 319 61.8
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 2.6e-109 399.4 320 61.9
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.7e-108 396.7 379 55.9
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 8.3e-108 394.4 322 59.9
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 8.3e-108 394.4 328 59.8
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 9.2e-107 391.0 293 65.9
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 2.7e-106 389.4 370 52.7
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 4.6e-106 388.7 322 59.3
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.0e-105 387.5 320 60.0
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 1.3e-105 387.1 319 61.1
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 1.6e-103 380.2 330 58.2
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.1e-103 379.8 343 57.4
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.8e-102 376.7 343 56.9
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 4.4e-101 372.1 329 60.2
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 8.3e-100 367.9 325 57.2
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 9.2e-99 364.4 351 56.7
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 1.7e-97 360.1 326 57.7
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 6.6e-97 358.2 327 56.0
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 2.5e-96 356.3 329 55.3
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 4.3e-96 355.5 296 61.8
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 5.6e-96 355.1 329 57.1
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 7.3e-96 354.8 247 67.2
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 2.1e-95 353.2 326 55.5
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 4.0e-94 349.0 276 62.0
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.5e-93 347.1 232 72.4
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 2.6e-93 346.3 328 55.2
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 2.4e-91 339.7 326 54.6
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 4.8e-87 325.5 256 65.2
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 3.4e-85 319.3 269 62.5
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 5.8e-85 318.5 295 55.6
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 5.4e-83 312.0 245 65.3
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 5.4e-83 312.0 323 51.4
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 3.9e-81 305.8 181 77.9
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 1.5e-80 303.9 323 51.7
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 2.0e-77 293.5 189 70.9
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.3e-76 290.8 217 64.1
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 1.9e-75 287.0 235 59.1
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 4.2e-75 285.8 325 48.0
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 3.3e-72 276.2 337 44.8
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 5.6e-72 275.4 326 44.2
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 3.7e-71 272.7 325 45.5
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 1.6e-66 257.3 327 41.3
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 7.4e-64 248.4 154 72.7
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 6.7e-57 225.3 317 44.5
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.8e-52 209.5 170 61.8
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.5e-51 206.8 156 61.5
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 6.7e-49 198.7 118 74.6
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 2.0e-45 187.2 315 37.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.1e-40 171.4 192 43.2
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 3.7e-39 166.4 169 52.1
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 9.4e-35 151.8 346 29.8
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 2.3e-33 147.1 316 32.3
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 4.0e-33 146.4 196 46.9
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 3.7e-31 139.8 348 32.5
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 4.1e-30 136.3 144 54.2
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 1.1e-27 128.3 154 46.8
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.2e-21 108.2 123 49.6
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 2.6e-16 90.5 59 74.6
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 3.1e-14 83.6 67 53.7
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 1.6e-13 81.3 241 27.0
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.5e-11 74.7 59 61.0
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 4.7e-10 69.7 59 50.8
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 1.2e-08 65.1 66 45.5
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 5.7e-08 62.8 58 53.4
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 7.5e-08 62.4 87 44.8


User provided reference genes

Program Settings