Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 8.6e-70 266.9 141 100.0
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.2e-58 229.9 141 83.7
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.2e-48 195.3 108 93.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 4.2e-48 194.9 140 73.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.1e-47 192.6 145 73.1
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 7.9e-47 190.7 119 80.7
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.0e-46 190.3 118 82.2
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.3e-46 189.9 120 80.0
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.3e-46 189.9 109 84.4
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 2.3e-46 189.1 135 73.3
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.3e-46 189.1 118 79.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 3.9e-46 188.3 118 78.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.1e-46 188.0 118 79.7
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 6.7e-46 187.6 119 80.7
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 6.7e-46 187.6 128 75.8
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 6.7e-46 187.6 128 75.8
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 6.7e-46 187.6 128 75.8
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 8.7e-46 187.2 152 66.4
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.5e-45 186.4 109 84.4
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.5e-45 186.4 128 75.0
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.9e-45 186.0 145 68.3
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.9e-45 186.0 114 82.5
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.9e-45 186.0 126 75.4
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.9e-45 186.0 141 70.2
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.5e-45 185.7 107 86.9
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 3.3e-45 185.3 118 80.5
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.3e-45 185.3 140 70.0
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.3e-45 185.3 144 68.8
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.3e-45 185.3 140 70.0
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 3.3e-45 185.3 113 81.4
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 4.3e-45 184.9 138 71.7
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 4.3e-45 184.9 109 83.5
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.3e-45 184.9 118 78.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 4.3e-45 184.9 130 72.3
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 4.3e-45 184.9 133 72.2
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 5.6e-45 184.5 141 70.2
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 5.6e-45 184.5 145 67.6
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 7.4e-45 184.1 141 69.5
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 7.4e-45 184.1 109 82.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 9.6e-45 183.7 115 78.3
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 9.6e-45 183.7 126 75.4
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.3e-44 183.3 134 70.1
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.3e-44 183.3 113 80.5
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.3e-44 183.3 118 78.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.3e-44 183.3 109 82.6
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.3e-44 183.3 109 82.6
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.3e-44 183.3 112 80.4
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 1.3e-44 183.3 109 82.6
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.6e-44 183.0 118 76.3
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.1e-44 182.6 117 77.8
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.8e-44 182.2 114 79.8
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.8e-44 182.2 138 68.8
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.7e-44 181.8 127 72.4
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.7e-44 181.8 134 71.6
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 4.8e-44 181.4 133 71.4
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 4.8e-44 181.4 107 85.0
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 8.1e-44 180.6 123 74.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 8.1e-44 180.6 125 73.6
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.1e-43 180.3 115 79.1
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.1e-43 180.3 150 64.7
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 1.1e-43 180.3 105 86.7
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.1e-43 180.3 111 82.0
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.8e-43 179.5 133 72.2
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.4e-43 179.1 132 71.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-43 179.1 146 67.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.4e-43 179.1 118 78.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.4e-43 179.1 105 82.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 3.1e-43 178.7 139 64.7
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 3.1e-43 178.7 124 76.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 3.1e-43 178.7 109 79.8
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 5.3e-43 177.9 136 67.6
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 6.9e-43 177.6 113 77.9
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 6.9e-43 177.6 119 75.6
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 6.9e-43 177.6 119 75.6
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 9.0e-43 177.2 152 63.8
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.2e-42 176.8 152 65.1
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.2e-42 176.8 102 87.3
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.0e-42 176.0 118 72.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.0e-42 176.0 118 72.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 2.0e-42 176.0 127 70.9
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 2.0e-42 176.0 139 67.6
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.0e-42 176.0 136 66.9
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 2.6e-42 175.6 123 73.2
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.5e-42 174.9 138 65.9
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.5e-42 174.9 138 65.9
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.5e-42 174.9 138 65.9
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 4.5e-42 174.9 100 87.0
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 7.6e-42 174.1 118 71.2
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 7.6e-42 174.1 123 72.4
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.3e-41 173.3 113 77.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-41 173.3 106 80.2
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-41 173.3 134 70.1
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.9e-41 172.2 104 81.7
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.9e-41 172.2 138 65.2
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 4.9e-41 171.4 137 68.6
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.9e-40 169.5 132 64.4
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.3e-40 167.2 122 69.7
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 4.6e-39 164.9 102 80.4
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 6.0e-39 164.5 134 65.7
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.8e-38 162.9 107 75.7
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.7e-37 157.9 122 67.2
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 4.5e-34 148.3 99 69.7
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.7e-33 146.4 127 59.8
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 3.8e-33 145.2 112 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 6.5e-33 144.4 122 57.4
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 2.1e-31 139.4 85 78.8
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 8.2e-28 127.5 128 50.8
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.1e-27 127.1 71 85.9
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-27 125.9 84 76.2
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 7.2e-24 114.4 63 85.7
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.3e-20 103.6 93 53.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.4e-19 100.1 56 85.7
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 5.5e-16 88.2 77 55.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 7.2e-16 87.8 44 93.2
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.2e-15 87.0 59 72.9
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 3.5e-10 68.9 44 68.2
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.7e-09 66.6 64 51.6


User provided reference genes

Program Settings