Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5266 Erigeron canadensis HOM05D038245 ORTHO05D010112 3.7e-89 331.6 184 100.0
HanXRQChr17g0535821 Helianthus annuus HOM05D038245 ORTHO05D010112 1.6e-63 246.5 185 69.7
Lsat_1_v5_gn_3_17720 Lactuca sativa HOM05D038245 ORTHO05D010112 3.5e-63 245.4 187 67.4
Dinv28956 Davidia involucrata HOM05D000381 ORTHO05D010112 6.3e-20 101.7 187 37.4
Sabra03G0061200 Salix brachista HOM05D001142 ORTHO05D003453 5.0e-17 92.0 189 35.4
Potri.003G091600 Populus trichocarpa HOM05D008115 ORTHO05D010112 1.6e-15 87.0 188 31.9
Ciclev10012855m.g Citrus clementina HOM05D008115 ORTHO05D010112 5.1e-14 82.0 195 32.3
Duzib205G0809 Durio zibethinus HOM05D008115 ORTHO05D010112 9.7e-13 77.8 192 31.2
GSVIVG01013162001 Vitis vinifera HOM05D008115 ORTHO05D010112 1.3e-12 77.4 196 30.6
Thecc.03G228100 Theobroma cacao HOM05D008115 ORTHO05D010112 2.8e-12 76.3 193 31.6
Prupe.5G036900 Prunus persica HOM05D008115 ORTHO05D010112 8.2e-12 74.7 200 30.5
QL12p005248 Quercus lobata HOM05D008115 ORTHO05D010112 2.4e-11 73.2 194 29.4
QL12p005415 Quercus lobata HOM05D008115 ORTHO05D010112 2.4e-11 73.2 194 29.4
Gohir.A08G156700 Gossypium hirsutum HOM05D008115 ORTHO05D010112 1.7e-09 67.0 193 29.0
Gohir.D08G177100 Gossypium hirsutum HOM05D008115 ORTHO05D010112 2.9e-09 66.2 192 29.2
Gorai.004G185300 Gossypium raimondii HOM05D008115 ORTHO05D010112 2.9e-09 66.2 192 29.2
Solyc08g150100.1 Solanum lycopersicum HOM05D028028 ORTHO05D010112 1.9e-08 63.5 141 36.2
Sp2g11610 Schrenkiella parvula HOM05D008115 ORTHO05D010112 2.1e-07 60.1 194 29.4
BcaC04g21681 Brassica carinata HOM05D008115 ORTHO05D010112 8.0e-07 58.2 194 31.4
Thhalv10001038m.g Eutrema salsugineum HOM05D008115 ORTHO05D010112 8.0e-07 58.2 97 38.1
A02p30340 Brassica napus HOM05D008115 ORTHO05D010112 1.4e-06 57.4 97 38.1
C09p28900 Brassica napus HOM05D008115 ORTHO05D010112 1.4e-06 57.4 97 38.1
BcaC03g16890 Brassica carinata HOM05D008115 ORTHO05D010112 1.8e-06 57.0 97 38.1
C02p47870 Brassica napus HOM05D008115 ORTHO05D010112 1.8e-06 57.0 97 38.1
BolC2t10820H Brassica oleracea HOM05D008115 ORTHO05D010112 1.8e-06 57.0 97 38.1
BraA02t08049Z Brassica rapa HOM05D008115 ORTHO05D010112 1.8e-06 57.0 97 38.1
CARHR174700 Cardamine hirsuta HOM05D008115 ORTHO05D010112 1.8e-06 57.0 194 26.8
Lj2g0018003 Lotus japonicus HOM05D008115 ORTHO05D010112 1.8e-06 57.0 201 28.9
TWI15G1224 Tripterygium wilfordii HOM05D008115 ORTHO05D010112 1.8e-06 57.0 158 30.4
VMungo1215G1226 Vigna mungo HOM05D008115 ORTHO05D010112 2.3e-06 56.6 193 28.0
Aa31LG9G6090 Aethionema arabicum HOM05D008115 ORTHO05D010112 3.0e-06 56.2 99 35.4
A09p22550 Brassica napus HOM05D008115 ORTHO05D010112 3.0e-06 56.2 97 37.1
Carub.0008s0112 Capsella rubella HOM05D008115 ORTHO05D010112 3.0e-06 56.2 97 36.1
DCAR_005627 Daucus carota HOM05D001142 ORTHO05D003453 3.0e-06 56.2 203 27.1
CiPaw.12G063600 Carya illinoinensis HOM05D008115 ORTHO05D010112 4.0e-06 55.8 205 29.8
PGR042G2453 Punica granatum HOM05D008115 ORTHO05D010112 4.0e-06 55.8 104 33.7
BcaB07g30820 Brassica carinata HOM05D008115 ORTHO05D010112 6.7e-06 55.1 97 37.1
FAN04G2182 Fragaria x ananassa HOM05D008115 ORTHO05D010112 6.7e-06 55.1 211 33.6
FAN18G3637 Fragaria x ananassa HOM05D008115 ORTHO05D010112 6.7e-06 55.1 212 32.5
Sopen08g001040 Solanum pennellii HOM05D028028 ORTHO05D010112 8.8e-06 54.7 137 33.6


User provided reference genes

Program Settings