Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 2.2e-99 365.5 172 100.0
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 6.0e-73 277.7 165 77.0
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 7.8e-73 277.3 169 74.0
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.7e-64 249.6 165 69.7
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 2.5e-63 245.7 164 68.9
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 3.6e-62 241.9 164 67.7
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 6.2e-62 241.1 164 67.7
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 8.1e-62 240.7 165 66.7
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.4e-61 239.2 164 67.1
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 3.1e-61 238.8 165 65.5
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 3.1e-61 238.8 165 64.8
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 9.0e-61 237.3 164 65.9
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 9.0e-61 237.3 165 64.2
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 2.6e-60 235.7 165 64.2
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 3.4e-60 235.3 165 64.8
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 3.4e-60 235.3 164 65.2
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 4.4e-60 235.0 165 66.1
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 4.4e-60 235.0 165 63.6
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 7.6e-60 234.2 165 65.5
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 7.6e-60 234.2 165 63.0
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 9.9e-60 233.8 165 64.8
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 1.3e-59 233.4 165 63.6
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.7e-59 233.0 165 64.2
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 2.2e-59 232.6 165 63.0
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 2.2e-59 232.6 165 63.0
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 2.2e-59 232.6 165 64.8
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 2.9e-59 232.3 165 66.1
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 2.9e-59 232.3 165 64.8
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 2.9e-59 232.3 164 64.0
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 3.8e-59 231.9 165 65.5
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 3.8e-59 231.9 165 65.5
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 3.8e-59 231.9 164 63.4
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 4.9e-59 231.5 164 63.4
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 8.4e-59 230.7 165 65.5
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 8.4e-59 230.7 165 65.5
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 8.4e-59 230.7 165 64.8
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 8.4e-59 230.7 165 61.8
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 1.1e-58 230.3 165 65.5
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 1.1e-58 230.3 165 64.8
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 1.4e-58 229.9 165 65.5
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 1.4e-58 229.9 165 63.0
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.4e-58 229.9 165 65.5
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 1.9e-58 229.6 164 61.6
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 2.4e-58 229.2 165 64.8
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 2.4e-58 229.2 165 63.0
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 3.2e-58 228.8 164 62.8
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 4.2e-58 228.4 165 64.8
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 4.2e-58 228.4 165 63.0
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 4.2e-58 228.4 168 63.1
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 5.4e-58 228.0 165 64.8
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 7.1e-58 227.6 165 62.4
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 7.1e-58 227.6 165 63.6
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 7.1e-58 227.6 164 61.6
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 9.3e-58 227.3 165 61.8
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.2e-57 226.9 166 65.7
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 1.6e-57 226.5 165 62.4
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.6e-57 226.5 165 61.8
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.6e-57 226.5 165 61.2
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 1.6e-57 226.5 165 61.2
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 1.6e-57 226.5 164 59.1
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 2.7e-57 225.7 165 61.8
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.7e-57 225.7 165 63.0
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.7e-57 225.7 165 63.0
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 2.7e-57 225.7 165 63.0
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 4.6e-57 224.9 164 61.0
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 4.6e-57 224.9 171 60.2
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 6.0e-57 224.6 161 62.7
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 1.0e-56 223.8 175 61.7
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 1.3e-56 223.4 164 61.6
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 3.0e-56 222.2 165 63.0
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 6.6e-56 221.1 165 60.0
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 8.7e-56 220.7 165 63.6
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 4.3e-55 218.4 165 61.2
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 5.6e-55 218.0 165 59.4
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 7.3e-55 217.6 164 59.8
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 1.6e-54 216.5 165 60.0
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 1.6e-54 216.5 165 60.6
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 1.6e-54 216.5 165 60.6
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 3.6e-54 215.3 161 58.4
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 4.8e-54 214.9 165 59.4
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 4.8e-54 214.9 164 62.2
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 4.8e-54 214.9 165 57.6
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 8.1e-54 214.2 165 57.6
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.1e-53 213.8 165 58.8
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.4e-53 213.4 165 58.8
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 1.8e-53 213.0 165 58.8
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 1.8e-53 213.0 165 57.0
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 2.0e-52 209.5 166 57.8
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.0e-52 209.5 165 58.2
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 2.6e-52 209.1 187 54.5
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 2.6e-52 209.1 165 61.2
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 2.6e-52 209.1 165 61.2
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 3.4e-52 208.8 165 60.0
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.9e-51 205.7 178 55.1
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 3.8e-51 205.3 164 57.9
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 1.9e-50 203.0 187 52.9
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 3.2e-50 202.2 166 60.2
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 2.7e-49 199.1 165 55.2
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 7.9e-49 197.6 201 48.8
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 6.7e-48 194.5 166 54.2
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 8.7e-48 194.1 165 56.4
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.5e-47 193.4 188 50.5
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 5.6e-47 191.4 217 45.2
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 9.6e-47 190.7 132 64.4
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 2.8e-46 189.1 170 52.4
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 3.7e-46 188.7 132 65.2
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 4.8e-46 188.3 166 53.0
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 4.5e-44 181.8 127 65.4
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.2e-43 179.5 174 50.6
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.1e-42 177.2 126 60.3
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 1.4e-42 176.8 172 48.8
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 3.2e-42 175.6 134 64.2
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 7.1e-42 174.5 181 48.1
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 4.6e-41 171.8 164 49.4
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 2.3e-40 169.5 164 48.2
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 3.0e-40 169.1 129 59.7
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 3.9e-40 168.7 165 49.1
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 5.1e-40 168.3 131 61.1
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 2.5e-39 166.0 163 48.5
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 5.6e-39 164.9 177 48.6
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.8e-38 162.5 164 48.2
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.4e-34 150.2 167 45.5
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.9e-34 149.8 117 57.3
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.7e-33 146.0 133 53.4
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.7e-33 146.0 149 47.7
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.5e-33 145.6 132 53.8
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 1.8e-32 143.3 164 45.1
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.1e-31 140.6 131 52.7
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.5e-31 140.2 138 46.4
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 1.9e-31 139.8 95 63.2
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 1.9e-31 139.8 95 63.2
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 1.9e-31 139.8 96 62.5
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 2.8e-30 136.0 117 52.1
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 6.9e-29 131.3 162 42.0
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.3e-27 127.1 164 42.1
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 5.0e-27 125.2 132 43.2
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.1e-26 124.0 164 41.5
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 1.4e-26 123.6 96 56.2
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.2e-25 120.6 127 44.9
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 2.3e-24 116.3 149 46.3
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.4e-21 107.1 180 38.3
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 1.2e-20 104.0 146 43.2
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.2e-19 99.8 89 49.4
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 1.9e-18 96.7 78 56.4
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 3.0e-16 89.4 100 49.0
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 2.4e-13 79.7 165 28.5
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.2e-12 77.4 61 62.3
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.2e-12 77.4 61 62.3
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.4e-12 75.9 62 61.3
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 7.7e-12 74.7 57 64.9
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.4e-10 70.5 57 63.2
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.4e-10 70.5 61 59.0
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.2e-10 69.3 61 57.4
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.5e-10 68.6 61 47.5
MCO11G136 Micromonas commoda HOM05D004267 ORTHO05D005267 8.8e-08 61.2 167 29.9
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.0e-07 60.1 111 31.5
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 2.2e-06 56.6 54 44.4
VMungo1196G0001 Vigna mungo HOM05D005620 ORTHO05D005267 3.7e-06 55.8 39 51.3
BcaB05g24144 Brassica carinata HOM05D000010 ORTHO05D000063 8.2e-06 54.7 37 67.6


User provided reference genes

Program Settings