Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5180 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-47 193.0 91 100.0
ECA246G4381 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-39 166.0 84 94.0
ECA236G4497 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-39 163.7 84 92.9
ECA246G2834 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-38 161.0 84 91.7
ECA233G3058 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-37 156.8 84 89.3
ECA234G4223 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-37 156.8 84 86.9
ECA232G2802 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-36 155.6 83 85.5
ECA240G4230 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-34 147.1 84 78.6
ECA246G1288 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-33 146.0 78 88.5
ECA240G0749 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-33 145.2 85 81.2
ECA233G3069 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-32 141.7 84 77.4
ECA240G1113 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-32 141.4 85 77.6
ECA247G2280 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-31 138.7 78 83.3
ECA234G4656 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-27 125.9 64 92.2
ECA240G2001 Erigeron canadensis HOM05D000059 ORTHO05D004122 4.9e-26 120.9 60 93.3
HanXRQChr04g0114611 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-23 111.3 83 60.2
HanXRQChr10g0297591 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-23 111.3 83 60.2
AL8G34590 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 5.1e-23 110.9 84 60.7
ECA240G4438 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-22 109.0 79 63.3
ECA236G1581 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-22 108.6 79 63.3
ECA234G2147 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-22 107.8 79 62.0
ECA247G2628 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-22 107.5 79 62.0
THA.LOC104818550 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.6e-21 105.9 84 56.0
ECA236G4587 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.2e-21 105.5 79 60.8
ECA236G2184 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-21 104.0 79 59.5
ECA246G1285 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-21 104.0 79 59.5
ECA248G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-21 104.0 81 58.0
THA.LOC104825272 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.3e-21 104.0 84 54.8
ECA247G1514 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.2e-21 103.6 79 60.8
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 1.4e-20 102.8 87 54.0
Hma1.2p1_0271F.1_g109100 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-20 102.4 83 55.4
THA.LOC104800401 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.4e-20 102.1 84 54.8
THA.LOC104827690 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.1e-20 101.7 84 53.6
ECA240G3614 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-20 101.3 79 59.5
FvH4_4g27782 Fragaria vesca HOM05D000002 ORTHO05D000001 4.1e-20 101.3 87 52.9
Hma1.2p1_0163F.1_g072650 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.3e-20 100.9 77 58.4
THA.LOC104827686 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-20 100.9 84 54.8
Thhalv10027475m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 1.5e-19 99.4 84 53.6
Hma1.2p1_0744F.1_g211835 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-19 98.2 77 58.4
Hma1.2p1_1812F.1_g303650 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-19 98.2 77 58.4
Thecc.09G001200 Theobroma cacao HOM05D000002 ORTHO05D000001 5.0e-18 94.4 83 49.4
ECA246G3197 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-18 94.0 79 57.0
ECA247G3022 Erigeron canadensis HOM05D000036 ORTHO05D000095 1.1e-17 93.2 63 66.7
Thhalv10010962m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 1.4e-17 92.8 74 56.8
COL.COLO4_16627 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.5e-17 90.9 83 45.8
Hma1.2p1_2957F.1_g330780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-16 89.0 77 53.2
ECA233G1159 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-14 82.4 64 60.9
ECA240G1047 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-14 81.6 55 65.5
ECA238G2442 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-13 79.3 55 63.6
Sp7g05770 Schrenkiella parvula HOM05D000002 ORTHO05D000001 4.8e-13 77.8 81 49.4
COL.COLO4_38010 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.2e-13 77.0 77 42.9
ECA238G0444 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-13 77.0 59 59.3
ECA233G5604 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-12 75.1 55 63.6
PSO384G0149 Papaver somniferum HOM05D000002 ORTHO05D000001 5.3e-12 74.3 83 45.8
PSO675G8921 Papaver somniferum HOM05D000002 ORTHO05D000001 5.9e-11 70.9 83 44.6
CANSAT54G1132 Cannabis sativa HOM05D000002 ORTHO05D000001 1.0e-10 70.1 84 41.7
BcaC05g26565 Brassica carinata HOM05D000002 ORTHO05D000001 6.5e-10 67.4 58 56.9
RcHm_v2.0_Chr2g0151961 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-10 67.4 72 40.3
RcHm_v2.0_Chr2g0171331 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-10 67.4 72 40.3
Ca_02942_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-09 66.6 48 60.4
Hma1.2p1_0169F.1_g074680 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-09 66.6 85 42.4
Thecc.09G332400 Theobroma cacao HOM05D000002 ORTHO05D000001 1.4e-09 66.2 55 50.9
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 1.9e-09 65.9 93 36.6
HanXRQChr06g0170781 Helianthus annuus HOM05D001889 ORTHO05D001853 2.5e-09 65.5 74 40.5
Hma1.2p1_1184F.1_g264870 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.2e-09 64.7 76 36.8
AUR62001926 Chenopodium quinoa HOM05D002878 ORTHO05D003649 5.5e-09 64.3 91 36.3
Sopen01g009470 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Sopen01g031800 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Sopen05g030490 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Sopen08g007360 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Sopen09g011150 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Sopen09g015540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-09 64.3 71 42.3
Hma1.2p1_1233F.1_g268960 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-09 63.9 85 41.2
Sopen03g020200 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-09 63.9 71 42.3
TWI81G0321 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.2e-09 63.9 92 41.3
Hma1.2p1_0972F.1_g242840 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-08 63.2 85 40.0
SpUn0001_0980 Schrenkiella parvula HOM05D000002 ORTHO05D000001 1.2e-08 63.2 71 45.1
Hma1.2p1_2881F.1_g329810 Hydrangea macrophylla HOM05D022710 ORTHO05D022428 1.6e-08 62.8 81 37.0
Sopen03g023860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 62.8 71 40.8
Prupe.4G265600 Prunus persica HOM05D000002 ORTHO05D000001 2.7e-08 62.0 84 34.5
Actinidia22700 Actinidia chinensis HOM05D000002 ORTHO05D000001 4.7e-08 61.2 76 39.5
PSO017G5625 Papaver somniferum HOM05D000002 ORTHO05D000001 4.7e-08 61.2 83 41.0
PGR031G0723 Punica granatum HOM05D000002 ORTHO05D000001 4.7e-08 61.2 89 40.4
Sopen07g017640 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-08 61.2 73 43.8
CANSAT01G0757 Cannabis sativa HOM05D000002 ORTHO05D000001 6.1e-08 60.8 87 36.8
CANSAT64G2842 Cannabis sativa HOM05D000002 ORTHO05D000001 7.9e-08 60.5 88 40.9
MD15G1436400 Malus domestica HOM05D001635 ORTHO05D001523 7.9e-08 60.5 74 40.5
PGR031G3830 Punica granatum HOM05D000002 ORTHO05D000001 7.9e-08 60.5 89 39.3
PGR042G0717 Punica granatum HOM05D000002 ORTHO05D000001 1.0e-07 60.1 89 39.3
PGR044G1020 Punica granatum HOM05D000002 ORTHO05D000001 1.0e-07 60.1 89 39.3
TPR.G26742 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-07 59.7 53 54.7
Atru.chr3.3921 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-07 59.3 82 39.0
Migut.B01883 Erythranthe guttata HOM05D001889 ORTHO05D001853 1.8e-07 59.3 68 35.3
Hma1.2p1_0157F.1_g069050 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-07 59.3 95 37.9
Prupe.2G065000 Prunus persica HOM05D000002 ORTHO05D000001 2.3e-07 58.9 84 34.5
FvH4_5g32801 Fragaria vesca HOM05D000002 ORTHO05D000001 3.0e-07 58.5 83 37.3
FvH4_7g16761 Fragaria vesca HOM05D001889 ORTHO05D001853 3.0e-07 58.5 74 37.8
DCAR_005395 Daucus carota HOM05D001889 ORTHO05D001853 5.1e-07 57.8 75 36.0
Dinv09648 Davidia involucrata HOM05D000002 ORTHO05D009184 5.1e-07 57.8 74 37.8
FvH4_6g05093 Fragaria vesca HOM05D000002 ORTHO05D000001 5.1e-07 57.8 73 37.0
Sopen10g015690 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-07 57.8 71 39.4
COL.COLO4_15218 Corchorus olitorius HOM05D030463 ORTHO05D000001 6.7e-07 57.4 47 46.8
Hma1.2p1_0446F.1_g154575 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 57.4 82 39.0
Hma1.2p1_0635F.1_g193125 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 57.4 82 39.0
Hma1.2p1_1323F.1_g275535 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 57.4 82 39.0
Hma1.2p1_2229F.1_g317545 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 57.4 82 39.0
CSS0009999 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.8e-07 57.0 78 34.6
FvH4_5g08912 Fragaria vesca HOM05D000002 ORTHO05D000001 8.8e-07 57.0 79 36.7
QL04p060477 Quercus lobata HOM05D001889 ORTHO05D001853 8.8e-07 57.0 75 36.0
Sopen01g049130 Solanum pennellii HOM05D006380 ORTHO05D008400 1.1e-06 56.6 66 40.9
Atru.chr2.1832 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 56.2 68 38.2
Lalb_Chr01g0006171 Lupinus albus HOM05D000002 ORTHO05D000001 1.5e-06 56.2 78 34.6
Lalb_Chr03g0030681 Lupinus albus HOM05D000002 ORTHO05D000001 1.5e-06 56.2 78 34.6
Atru.chr8.988 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-06 55.8 76 35.5
Dinv32598 Davidia involucrata HOM05D001889 ORTHO05D000001 2.0e-06 55.8 74 35.1
Hma1.2p1_1143F.1_g261160 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-06 55.8 82 37.8
CSS0022242 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 55.5 78 33.3
CSS0024595 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 2.6e-06 55.5 74 36.5
Cpa.g.sc96.34 Carica papaya HOM05D001889 ORTHO05D001853 2.6e-06 55.5 74 35.1
ECA236G4907 Erigeron canadensis HOM05D001889 ORTHO05D001853 2.6e-06 55.5 74 36.5
ECA240G2531 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-06 55.5 78 30.8
Hma1.2p1_1395F.1_g280530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-06 55.5 80 36.2
PSO724G0667 Papaver somniferum HOM05D000002 ORTHO05D000001 2.6e-06 55.5 86 32.6
Sopen06g005240 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 88 31.8
CAN.G528.2 Capsicum annuum HOM05D000002 ORTHO05D000001 3.3e-06 55.1 72 36.1
PGR083G1470 Punica granatum HOM05D000002 ORTHO05D000001 3.3e-06 55.1 72 34.7
AUR62004504 Chenopodium quinoa HOM05D001889 ORTHO05D001853 4.4e-06 54.7 71 33.8
AUR62023450 Chenopodium quinoa HOM05D001889 ORTHO05D001853 4.4e-06 54.7 71 33.8
Thhalv10003415m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 4.4e-06 54.7 48 56.2
FvH4_3g12632 Fragaria vesca HOM05D000002 ORTHO05D000001 4.4e-06 54.7 72 36.1
FvH4_4g15488 Fragaria vesca HOM05D000002 ORTHO05D000001 4.4e-06 54.7 94 31.9
FvH4_4g23911 Fragaria vesca HOM05D000002 ORTHO05D000001 4.4e-06 54.7 72 36.1
ECA236G3459 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-06 54.3 72 34.7
Nitab4.5_0004506g0040 Nicotiana tabacum HOM05D001889 ORTHO05D001853 5.7e-06 54.3 71 33.8
Sopen09g014450 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 88 30.7
Actinidia27561 Actinidia chinensis HOM05D001889 ORTHO05D001853 7.4e-06 53.9 74 33.8
CSS0009573 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 32.1
ECA232G4299 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 32.1
ECA232G4315 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.4e-06 53.9 40 57.5
ECA233G2618 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 30.8
ECA233G4598 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 30.8
ECA234G1670 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 30.8
ECA238G0583 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 53.9 78 30.8
FvH4_6g33792 Fragaria vesca HOM05D000002 ORTHO05D000001 7.4e-06 53.9 80 37.5
ECA236G4455 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.5 78 30.8
ECA238G0832 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.5 78 30.8
ECA240G0711 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.5 72 31.9
ECA246G1612 Erigeron canadensis HOM05D000031 ORTHO05D000001 9.7e-06 53.5 78 30.8
ECA246G3139 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.5 78 30.8
Sabra02G0140800 Salix brachista HOM05D001889 ORTHO05D001853 9.7e-06 53.5 77 32.5
Sopen04g021930 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-06 53.5 69 33.3
Sopen09g016400 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-06 53.5 72 31.9
Sopen10g006990 Solanum pennellii HOM05D000002 ORTHO05D000001 9.7e-06 53.5 88 30.7


User provided reference genes

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