Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5167 Erigeron canadensis HOM05D006433 ORTHO05D005382 3.0e-148 528.5 267 100.0
Lsat_1_v5_gn_3_35360 Lactuca sativa HOM05D006433 ORTHO05D005382 6.5e-50 201.8 306 45.1
Actinidia38416 Actinidia chinensis HOM05D006433 ORTHO05D005382 4.8e-21 105.9 285 35.8
Actinidia13713 Actinidia chinensis HOM05D006433 ORTHO05D005382 1.8e-20 104.0 264 33.7
DCAR_002584 Daucus carota HOM05D006433 ORTHO05D005382 1.2e-19 101.3 155 42.6
Thecc.02G159800 Theobroma cacao HOM05D006433 ORTHO05D005382 2.0e-19 100.5 292 29.5
Solyc04g009305.1 Solanum lycopersicum HOM05D006433 ORTHO05D005382 5.9e-19 99.0 305 28.9
TAR371G0604 Trochodendron aralioides HOM05D006433 ORTHO05D005382 5.9e-19 99.0 120 45.8
Ciclev10031878m.g Citrus clementina HOM05D006433 ORTHO05D005382 1.3e-18 97.8 258 30.6
PGSC0003DMG400032563 Solanum tuberosum HOM05D006433 ORTHO05D005382 2.9e-18 96.7 308 28.2
DCAR_026896 Daucus carota HOM05D006433 ORTHO05D005382 8.5e-18 95.1 271 31.0
Cc11_g02400 Coffea canephora HOM05D006433 ORTHO05D005382 1.1e-17 94.7 128 47.7
COL.COLO4_03341 Corchorus olitorius HOM05D006433 ORTHO05D005382 1.5e-17 94.4 315 28.9
Gohir.A03G164900 Gossypium hirsutum HOM05D006433 ORTHO05D005382 1.9e-17 94.0 285 32.3
Nitab4.5_0002132g0010 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.5e-17 93.6 139 42.4
SalBow2G0414 Salvia bowleyana HOM05D006433 ORTHO05D005382 5.5e-17 92.4 248 35.1
Duzib132G0593 Durio zibethinus HOM05D006433 ORTHO05D005382 7.2e-17 92.0 290 30.7
Lj6A717T151 Lonicera japonica HOM05D006433 ORTHO05D005382 7.2e-17 92.0 131 45.0
FvH4_4g36960 Fragaria vesca HOM05D006433 ORTHO05D005382 2.1e-16 90.5 88 54.5
FAN07G1145 Fragaria x ananassa HOM05D006433 ORTHO05D005382 2.1e-16 90.5 88 54.5
FAN12G0758 Fragaria x ananassa HOM05D006433 ORTHO05D005382 2.1e-16 90.5 88 54.5
MBI03_g09362_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 2.1e-16 90.5 208 37.5
Nitab4.5_0005356g0050 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.1e-16 90.5 291 29.6
Duzib248G0841 Durio zibethinus HOM05D006433 ORTHO05D005382 2.7e-16 90.1 263 28.9
FAN17G1725 Fragaria x ananassa HOM05D006433 ORTHO05D005382 2.7e-16 90.1 88 53.4
TAR629G0072 Trochodendron aralioides HOM05D006433 ORTHO05D005382 3.6e-16 89.7 300 29.0
TWI74G1071 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 4.7e-16 89.4 276 30.4
Gorai.005G210800 Gossypium raimondii HOM05D006433 ORTHO05D005382 6.1e-16 89.0 282 30.5
MD13G1005200 Malus domestica HOM05D006433 ORTHO05D005382 6.1e-16 89.0 94 48.9
SGA_v2.0_scaffold6G03215 Striga asiatica HOM05D006433 ORTHO05D005382 8.0e-16 88.6 246 31.7
Haze_11768 Corylus avellana HOM05D006433 ORTHO05D005382 1.8e-15 87.4 235 32.8
Glyma.09G282600 Glycine max HOM05D006433 ORTHO05D005382 3.0e-15 86.7 261 28.7
RcHm_v2.0_Chr4g0446731 Rosa chinensis HOM05D006433 ORTHO05D005382 3.0e-15 86.7 148 38.5
AL6G18640 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 5.2e-15 85.9 269 30.5
Gohir.D02G188100 Gossypium hirsutum HOM05D006433 ORTHO05D005382 5.2e-15 85.9 280 28.6
PGR142G2540 Punica granatum HOM05D006433 ORTHO05D005382 5.2e-15 85.9 125 41.6
Potri.005G092400 Populus trichocarpa HOM05D006433 ORTHO05D005382 6.8e-15 85.5 125 41.6
Lj2g0006429 Lotus japonicus HOM05D006433 ORTHO05D005382 8.8e-15 85.1 144 39.6
CiPaw.05G169900 Carya illinoinensis HOM05D006433 ORTHO05D005382 2.0e-14 84.0 235 28.5
Gohir.D12G137000 Gossypium hirsutum HOM05D006433 ORTHO05D005382 2.0e-14 84.0 269 30.9
MD16G1002700 Malus domestica HOM05D006433 ORTHO05D005382 2.0e-14 84.0 92 50.0
Psat6g135800 Pisum sativum HOM05D006433 ORTHO05D005382 2.0e-14 84.0 123 43.1
VMungo0251G3481 Vigna mungo HOM05D006433 ORTHO05D005382 2.6e-14 83.6 83 54.2
Cpa.g.sc0.139 Carica papaya HOM05D006433 ORTHO05D005382 4.4e-14 82.8 115 41.7
Sopen04g004420 Solanum pennellii HOM05D006433 ORTHO05D005382 4.4e-14 82.8 88 48.9
AT5G23160 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 5.7e-14 82.4 276 31.2
CARHR190370 Cardamine hirsuta HOM05D006433 ORTHO05D005382 7.5e-14 82.0 285 29.8
Cfa008752 Carpinus fangiana HOM05D006433 ORTHO05D005382 7.5e-14 82.0 233 31.8
CiPaw.06G061400 Carya illinoinensis HOM05D006433 ORTHO05D005382 9.8e-14 81.6 138 38.4
Medtr1g037520 Medicago truncatula HOM05D006433 ORTHO05D005382 9.8e-14 81.6 144 36.8
Manes.11G107400 Manihot esculenta HOM05D006433 ORTHO05D005382 1.3e-13 81.3 302 29.5
Nitab4.5_0000771g0160 Nicotiana tabacum HOM05D006433 ORTHO05D005382 1.3e-13 81.3 303 28.1
TWI77G0994 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 2.2e-13 80.5 160 33.8
CARHR204930 Cardamine hirsuta HOM05D006433 ORTHO05D005382 2.8e-13 80.1 278 29.5
Gohir.A12G133500 Gossypium hirsutum HOM05D006433 ORTHO05D005382 2.8e-13 80.1 264 31.1
Lalb_Chr10g0094961 Lupinus albus HOM05D006433 ORTHO05D005382 2.8e-13 80.1 245 29.0
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea HOM05D006433 ORTHO05D005382 6.3e-13 79.0 137 39.4
Prupe.1G347600 Prunus persica HOM05D006433 ORTHO05D005382 6.3e-13 79.0 82 48.8
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea HOM05D006433 ORTHO05D005382 8.3e-13 78.6 108 43.5
CANSAT56G2818 Cannabis sativa HOM05D006433 ORTHO05D005382 8.3e-13 78.6 305 30.2
Thhalv10014452m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 8.3e-13 78.6 88 47.7
Eucgr.G02576 Eucalyptus grandis HOM05D006433 ORTHO05D005382 1.1e-12 78.2 88 50.0
MBI06_g16016_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 1.1e-12 78.2 85 45.9
BraA02t09057Z Brassica rapa HOM05D006433 ORTHO05D005382 1.4e-12 77.8 107 41.1
Aa31LG11G2650 Aethionema arabicum HOM05D006433 ORTHO05D005382 2.4e-12 77.0 260 27.7
A02p41140 Brassica napus HOM05D006433 ORTHO05D005382 2.4e-12 77.0 107 39.3
Actinidia09967 Actinidia chinensis HOM05D006433 ORTHO05D005382 3.1e-12 76.6 125 39.2
BcaB07g29865 Brassica carinata HOM05D006433 ORTHO05D005382 3.1e-12 76.6 111 41.4
AT5G08240 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 4.1e-12 76.3 257 30.7
Carub.0006s2095 Capsella rubella HOM05D006433 ORTHO05D005382 4.1e-12 76.3 90 50.0
Gorai.008G148300 Gossypium raimondii HOM05D006433 ORTHO05D005382 4.1e-12 76.3 198 34.3
arahy.Tifrunner.gnm1.ann1.48DCIV Arachis hypogaea HOM05D056638 ORTHO05D005382 5.4e-12 75.9 88 46.6
C02p61000 Brassica napus HOM05D006433 ORTHO05D005382 7.0e-12 75.5 101 41.6
C09p68700 Brassica napus HOM05D006433 ORTHO05D005382 7.0e-12 75.5 88 47.7
BolC9t59616H Brassica oleracea HOM05D006433 ORTHO05D005382 7.0e-12 75.5 88 47.7
BcaC03g18036 Brassica carinata HOM05D006433 ORTHO05D005382 9.1e-12 75.1 101 41.6
AL6G34350 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 1.2e-11 74.7 273 30.4
ATR0618G439 Amborella trichopoda HOM05D006433 ORTHO05D005382 2.0e-11 73.9 163 34.4
Phvul.003G005000 Phaseolus vulgaris HOM05D006433 ORTHO05D005382 2.0e-11 73.9 100 43.0
Sabra07G0060600 Salix brachista HOM05D006433 ORTHO05D005382 2.0e-11 73.9 138 38.4
Thhalv10005318m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 2.7e-11 73.6 118 41.5
Sabra05G0076500 Salix brachista HOM05D006433 ORTHO05D005382 2.7e-11 73.6 204 31.9
Sp6g34710 Schrenkiella parvula HOM05D006433 ORTHO05D005382 2.7e-11 73.6 90 45.6
Manes.03G007400 Manihot esculenta HOM05D006433 ORTHO05D005382 3.5e-11 73.2 108 42.6
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 4.5e-11 72.8 94 40.4
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 4.5e-11 72.8 94 40.4
TPR.G39976 Trifolium pratense HOM05D006433 ORTHO05D005382 4.5e-11 72.8 261 27.6
A10p28440 Brassica napus HOM05D006433 ORTHO05D005382 5.9e-11 72.4 279 28.3
BraA10t44892Z Brassica rapa HOM05D006433 ORTHO05D005382 5.9e-11 72.4 279 28.3
Potri.001G408900 Populus trichocarpa HOM05D006433 ORTHO05D005382 5.9e-11 72.4 90 42.2
BolC2t12149H Brassica oleracea HOM05D006433 ORTHO05D005382 7.7e-11 72.0 277 29.2
Potri.007G071900 Populus trichocarpa HOM05D006433 ORTHO05D005382 1.0e-10 71.6 156 32.7
BcaNung05094 Brassica carinata HOM05D006433 ORTHO05D005382 1.3e-10 71.2 273 28.2
AUR62032989 Chenopodium quinoa HOM05D006433 ORTHO05D005382 1.3e-10 71.2 266 29.3
AUR62017700 Chenopodium quinoa HOM05D006433 ORTHO05D005382 2.9e-10 70.1 272 27.6
Oeu063832.1 Olea europaea HOM05D006433 ORTHO05D005382 2.9e-10 70.1 93 43.0
Dinv08359 Davidia involucrata HOM05D012187 ORTHO05D005382 3.8e-10 69.7 102 38.2
MSTRG.13683 Avicennia marina HOM05D006433 ORTHO05D005382 8.5e-10 68.6 200 30.0
Carub.0006s0712 Capsella rubella HOM05D006433 ORTHO05D005382 1.5e-09 67.8 193 30.1
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 1.9e-09 67.4 82 43.9
DCAR_025546 Daucus carota HOM05D006433 ORTHO05D005382 5.5e-09 65.9 101 36.6
Glyma.20G002800 Glycine max HOM05D006433 ORTHO05D005382 5.5e-09 65.9 90 42.2
TAR011G0003 Trochodendron aralioides HOM05D008701 ORTHO05D010238 5.5e-09 65.9 92 41.3
Aa31LG3G18330 Aethionema arabicum HOM05D006433 ORTHO05D005382 9.4e-09 65.1 97 43.3
DCAR_023460 Daucus carota HOM05D006433 ORTHO05D005382 9.4e-09 65.1 67 58.2
Migut.E00694 Erythranthe guttata HOM05D006433 ORTHO05D005382 9.4e-09 65.1 87 37.9
QL03p044176 Quercus lobata HOM05D006433 ORTHO05D005382 1.6e-08 64.3 81 44.4
SEGI_32645 Sequoiadendron giganteum HOM05D006433 ORTHO05D005382 2.7e-08 63.5 166 30.7
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 2.7e-08 63.5 84 38.1
TAR624G0030 Trochodendron aralioides HOM05D008701 ORTHO05D010238 3.6e-08 63.2 86 41.9
TAR624G0398 Trochodendron aralioides HOM05D008701 ORTHO05D010238 3.6e-08 63.2 86 41.9
Oeu013185.1 Olea europaea HOM05D006433 ORTHO05D005382 1.0e-07 61.6 85 41.2
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 1.0e-07 61.6 107 35.5
TWI36G1014 Tripterygium wilfordii HOM05D008701 ORTHO05D010238 1.8e-07 60.8 70 45.7
TWI38G1693 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 2.3e-07 60.5 86 37.2
Potri.013G149300 Populus trichocarpa HOM05D008701 ORTHO05D010238 6.8e-07 58.9 83 43.4
SEGI_06945 Sequoiadendron giganteum HOM05D020619 ORTHO05D005382 6.8e-07 58.9 85 32.9
Sc06g0007710 Simmondsia chinensis HOM05D006433 ORTHO05D005382 1.2e-06 58.2 242 27.7
MELO3C023593.2 Cucumis melo HOM05D027220 ORTHO05D005382 1.5e-06 57.8 87 37.9
Rhsim06G0153900 Rhododendron simsii HOM05D038632 ORTHO05D028399 1.5e-06 57.8 259 27.8
BcaB08g37272 Brassica carinata HOM05D006433 ORTHO05D005382 2.6e-06 57.0 69 44.9
BcaB01g05621 Brassica carinata HOM05D006433 ORTHO05D005382 3.4e-06 56.6 221 27.1
BolC3t12950H Brassica oleracea HOM05D006433 ORTHO05D005382 3.4e-06 56.6 221 27.1
ClCG09G004510 Citrullus lanatus HOM05D027220 ORTHO05D005382 3.4e-06 56.6 186 26.9
A03p03690 Brassica napus HOM05D006433 ORTHO05D005382 7.5e-06 55.5 219 27.9
C03p04180 Brassica napus HOM05D006433 ORTHO05D005382 7.5e-06 55.5 217 27.6
Aqoxy5G03711 Aquilegia oxysepala HOM05D006433 ORTHO05D005382 9.8e-06 55.1 85 36.5
Duzib213G0120 Durio zibethinus HOM05D013385 ORTHO05D005382 9.8e-06 55.1 86 37.2
Thecc.07G068900 Theobroma cacao HOM05D013385 ORTHO05D005382 9.8e-06 55.1 94 35.1


User provided reference genes

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