Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 1.4e-47 192.6 98 100.0
ECA246G3613 Erigeron canadensis HOM05D003899 ORTHO05D003655 1.8e-29 132.5 95 69.5
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 2.3e-29 132.1 92 71.7
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 3.0e-29 131.7 92 75.0
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 2.2e-27 125.6 92 71.7
HanXRQChr08g0232541 Helianthus annuus HOM05D003899 ORTHO05D003655 4.5e-25 117.9 90 64.4
HanXRQChr05g0161081 Helianthus annuus HOM05D003899 ORTHO05D003655 1.2e-22 109.8 94 60.6
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.1e-15 86.7 75 57.3
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 3.2e-15 85.1 96 47.9
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.2e-15 84.0 84 47.6
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 9.4e-15 83.6 75 50.7
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 9.4e-15 83.6 75 50.7
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 2.1e-14 82.4 84 47.6
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 4.7e-14 81.3 90 46.7
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 1.8e-13 79.3 92 41.3
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 2.3e-13 79.0 95 42.1
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.3e-13 79.0 92 47.8
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.3e-13 79.0 93 47.3
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 3.0e-13 78.6 91 45.1
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 5.2e-13 77.8 76 48.7
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 6.8e-13 77.4 75 46.7
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 1.2e-12 76.6 88 43.2
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 1.2e-12 76.6 88 43.2
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 1.2e-12 76.6 90 44.4
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 2.6e-12 75.5 89 48.3
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 3.4e-12 75.1 77 48.1
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 5.7e-12 74.3 91 45.1
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 9.8e-12 73.6 90 42.2
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 2.2e-11 72.4 96 44.8
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 3.7e-11 71.6 85 47.1
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 4.8e-11 71.2 95 44.2
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 8.3e-11 70.5 94 40.4
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 8.3e-11 70.5 67 43.3
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 8.3e-11 70.5 89 41.6
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 1.1e-10 70.1 88 39.8
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 1.4e-10 69.7 95 37.9
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 1.8e-10 69.3 88 39.8
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 2.4e-10 68.9 95 37.9
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 2.4e-10 68.9 99 42.4
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 4.1e-10 68.2 75 40.0
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 4.1e-10 68.2 76 40.8
CARHR035480 Cardamine hirsuta HOM05D003899 ORTHO05D003655 5.4e-10 67.8 88 40.9
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 5.4e-10 67.8 94 44.7
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 5.4e-10 67.8 96 37.5
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 7.0e-10 67.4 84 45.2
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 9.1e-10 67.0 84 42.9
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 1.2e-09 66.6 75 42.7
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 1.2e-09 66.6 94 44.7
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 2.7e-09 65.5 94 38.3
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 3.5e-09 65.1 101 40.6
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 3.5e-09 65.1 83 39.8
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 4.5e-09 64.7 86 39.5
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 5.9e-09 64.3 82 47.6
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 5.9e-09 64.3 84 35.7
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 5.9e-09 64.3 84 35.7
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 7.7e-09 63.9 94 37.2
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 7.7e-09 63.9 90 38.9
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 1.0e-08 63.5 75 44.0
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.0e-08 63.5 88 38.6
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.3e-08 63.2 87 40.2
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.3e-08 63.2 86 38.4
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 1.3e-08 63.2 95 40.0
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 1.7e-08 62.8 54 50.0
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 1.7e-08 62.8 94 38.3
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 1.7e-08 62.8 71 43.7
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 1.7e-08 62.8 85 42.4
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 2.2e-08 62.4 83 41.0
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 2.2e-08 62.4 76 43.4
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 2.9e-08 62.0 88 38.6
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 3.8e-08 61.6 91 39.6
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 5.0e-08 61.2 89 36.0
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 5.0e-08 61.2 42 61.9
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 6.5e-08 60.8 73 43.8
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 6.5e-08 60.8 87 39.1
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 6.5e-08 60.8 96 38.5
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 8.5e-08 60.5 71 42.3
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.9e-07 59.3 69 43.5
CAN.G833.2 Capsicum annuum HOM05D003899 ORTHO05D003655 3.2e-07 58.5 81 40.7
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 3.2e-07 58.5 62 43.5
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 3.2e-07 58.5 94 41.5
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 3.2e-07 58.5 57 43.9
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 3.2e-07 58.5 90 40.0
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 3.2e-07 58.5 79 38.0
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 4.2e-07 58.2 73 41.1
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 4.2e-07 58.2 60 45.0
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 5.5e-07 57.8 93 41.9
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 5.5e-07 57.8 58 46.6
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 5.5e-07 57.8 93 37.6
Peaxi162Scf00263g00033 Petunia axillaris HOM05D003899 ORTHO05D003655 5.5e-07 57.8 93 33.3
Sed0020885 Sechium edule HOM05D003899 ORTHO05D003655 5.5e-07 57.8 87 36.8
PGR044G1758 Punica granatum HOM05D003899 ORTHO05D003655 7.2e-07 57.4 71 43.7
Carub.0001s3477 Capsella rubella HOM05D003899 ORTHO05D003655 9.4e-07 57.0 79 38.0
PSO126G0001 Papaver somniferum HOM05D003899 ORTHO05D003655 9.4e-07 57.0 66 42.4
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 1.2e-06 56.6 81 40.7
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 1.6e-06 56.2 49 55.1
CAN.G1012.7 Capsicum annuum HOM05D003899 ORTHO05D003655 1.6e-06 56.2 75 38.7
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 1.6e-06 56.2 58 44.8
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 2.1e-06 55.8 60 43.3
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.1e-06 55.8 57 40.4
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 2.1e-06 55.8 58 41.4
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 2.1e-06 55.8 60 41.7
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.7e-06 55.5 91 38.5
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 2.7e-06 55.5 90 37.8
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.6e-06 55.1 80 35.0
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 3.6e-06 55.1 80 40.0
Psat6g033800 Pisum sativum HOM05D003899 ORTHO05D003655 3.6e-06 55.1 78 37.2
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 4.7e-06 54.7 78 41.0
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 4.7e-06 54.7 80 35.0
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 4.7e-06 54.7 60 40.0
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.7e-06 54.7 70 38.6
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.7e-06 54.7 54 48.1
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 4.7e-06 54.7 60 38.3
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 6.1e-06 54.3 63 42.9
MELO3C023688.2 Cucumis melo HOM05D003899 ORTHO05D003655 6.1e-06 54.3 92 35.9
Nitab4.5_0000299g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.1e-06 54.3 92 32.6
PGSC0003DMG400024811 Solanum tuberosum HOM05D003899 ORTHO05D003655 8.0e-06 53.9 93 35.5


User provided reference genes

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