Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 2.1e-74 282.3 146 100.0
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.2e-59 231.5 147 81.6
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.6e-39 166.4 104 77.9
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 8.2e-39 164.1 146 63.7
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.0e-38 160.6 146 60.3
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 9.0e-38 160.6 146 61.6
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.5e-37 159.8 114 73.7
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.0e-37 159.5 146 60.3
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.0e-37 159.5 146 60.3
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.0e-37 159.5 105 76.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 4.5e-37 158.3 123 68.3
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 5.9e-37 157.9 109 74.3
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 5.9e-37 157.9 104 76.0
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 7.7e-37 157.5 157 58.0
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.0e-36 157.1 149 59.7
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.7e-36 156.4 147 60.5
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.9e-36 155.6 101 76.2
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.9e-36 155.6 105 73.3
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.9e-36 155.6 98 78.6
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 2.9e-36 155.6 123 63.4
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 3.8e-36 155.2 100 76.0
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 3.8e-36 155.2 151 58.9
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 5.0e-36 154.8 149 59.1
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 6.5e-36 154.5 152 59.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.1e-35 153.7 112 68.8
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.1e-35 153.7 104 74.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 1.4e-35 153.3 148 59.5
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.4e-35 153.3 105 70.5
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.9e-35 152.9 150 58.0
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.5e-35 152.5 101 72.3
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.5e-35 152.5 144 60.4
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 2.5e-35 152.5 149 59.1
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.2e-35 152.1 108 71.3
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 4.2e-35 151.8 98 75.5
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.2e-35 151.8 98 75.5
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.5e-35 151.4 105 70.5
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 5.5e-35 151.4 112 68.8
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 5.5e-35 151.4 101 75.2
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 5.5e-35 151.4 98 74.5
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 7.2e-35 151.0 98 76.5
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 9.4e-35 150.6 106 70.8
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.2e-34 150.2 122 66.4
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 105 73.3
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.6e-34 149.8 108 71.3
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.6e-34 149.8 149 58.4
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 2.1e-34 149.4 148 59.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.1e-34 149.4 106 70.8
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 2.1e-34 149.4 149 57.0
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 2.1e-34 149.4 104 71.2
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.1e-34 149.4 155 52.9
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 2.7e-34 149.1 149 57.7
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 3.6e-34 148.7 105 69.5
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 4.6e-34 148.3 153 54.2
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 6.1e-34 147.9 98 74.5
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 7.9e-34 147.5 98 74.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 7.9e-34 147.5 105 72.4
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.4e-33 146.7 160 50.0
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.8e-33 146.4 149 54.4
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 2.3e-33 146.0 151 54.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 2.3e-33 146.0 151 54.3
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.0e-33 145.6 155 52.9
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.0e-33 145.6 146 57.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 3.9e-33 145.2 150 53.3
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 3.9e-33 145.2 156 51.9
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 3.9e-33 145.2 113 68.1
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 3.9e-33 145.2 146 52.7
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.9e-33 145.2 105 69.5
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 5.1e-33 144.8 116 63.8
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.1e-33 144.8 105 69.5
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 6.7e-33 144.4 80 88.8
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.1e-32 143.7 104 67.3
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-32 143.3 146 54.1
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.5e-32 143.3 147 53.7
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 147 53.7
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 4.3e-32 141.7 128 58.6
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 5.7e-32 141.4 109 65.1
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 5.7e-32 141.4 146 53.4
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 7.4e-32 141.0 144 54.9
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.7e-31 139.8 117 59.8
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 1.7e-31 139.8 98 70.4
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.7e-31 139.8 98 70.4
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.7e-31 139.8 98 71.4
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 2.2e-31 139.4 118 60.2
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.2e-31 139.4 125 58.4
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 3.7e-31 138.7 97 73.2
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 4.8e-31 138.3 157 50.3
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 4.8e-31 138.3 130 57.7
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.4e-30 136.7 115 60.9
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 2.4e-30 136.0 115 60.9
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 4.1e-30 135.2 93 71.0
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 4.1e-30 135.2 98 69.4
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 5.3e-30 134.8 147 51.0
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 6.9e-30 134.4 107 66.4
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 9.1e-30 134.0 109 60.6
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 9.1e-30 134.0 109 60.6
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.2e-29 133.7 97 69.1
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 1.5e-29 133.3 124 56.5
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.6e-29 132.5 109 59.6
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.0e-28 130.6 94 70.2
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.0e-28 130.6 112 55.4
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 2.2e-28 129.4 179 44.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 6.5e-28 127.9 99 62.6
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.4e-27 126.7 189 46.6
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 8.8e-25 117.5 101 58.4
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 4.8e-23 111.7 149 50.3
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 4.8e-23 111.7 108 57.4
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.4e-22 110.2 126 51.6
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.2e-21 107.1 197 36.5
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 6.5e-20 101.3 61 77.0
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.4e-19 100.1 101 47.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.3e-17 92.8 62 72.6
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 5.2e-17 91.7 99 45.5
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.6e-16 89.4 52 86.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 7.4e-16 87.8 98 40.8
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.3e-15 87.0 106 42.5
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 6.3e-15 84.7 55 74.5
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 2.4e-14 82.8 93 45.2
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 6.5e-12 74.7 95 43.2
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 7.2e-11 71.2 57 64.9
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.2e-10 70.5 42 71.4
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 5.2e-09 65.1 96 34.4


User provided reference genes

Program Settings