Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 9.2e-113 410.2 206 100.0
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.2e-64 250.4 212 67.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 3.0e-63 245.7 204 68.1
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.2e-59 233.8 212 62.3
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.8e-55 219.9 209 61.2
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 5.2e-55 218.4 210 60.5
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 3.1e-52 209.1 224 55.4
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 5.9e-51 204.9 206 54.9
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.7e-50 203.4 233 52.8
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.7e-50 203.4 216 55.6
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 3.8e-50 202.2 215 54.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 3.8e-50 202.2 215 54.9
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.0e-50 201.8 213 55.9
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 5.0e-50 201.8 215 55.3
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 5.5e-49 198.4 214 55.6
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.7e-48 196.1 213 54.5
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.7e-48 196.1 219 54.8
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 3.6e-48 195.7 212 54.2
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.0e-47 194.1 218 53.2
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.5e-46 190.3 214 55.1
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.6e-46 189.5 213 54.5
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 3.3e-46 189.1 217 53.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 7.5e-46 188.0 218 51.8
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.3e-45 187.2 220 53.2
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.7e-45 186.8 213 54.0
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.2e-45 186.4 214 52.8
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.7e-45 185.7 214 50.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 3.7e-45 185.7 212 52.4
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 4.8e-45 185.3 220 52.3
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 4.8e-45 185.3 216 51.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 6.3e-45 184.9 213 54.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 6.3e-45 184.9 215 52.1
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 6.3e-45 184.9 219 52.1
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 8.2e-45 184.5 216 52.3
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.4e-44 183.7 212 51.4
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 2.4e-44 183.0 218 53.2
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.4e-44 183.0 210 52.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 3.1e-44 182.6 216 53.2
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 4.1e-44 182.2 220 50.0
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 7.0e-44 181.4 212 51.9
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 9.1e-44 181.0 220 50.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.2e-43 180.6 212 50.5
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.6e-43 180.3 216 50.5
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 2.0e-43 179.9 212 49.1
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.5e-43 178.7 212 50.5
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.0e-42 177.6 220 50.0
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.3e-42 177.2 218 52.3
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.2e-42 176.4 233 48.1
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.9e-42 176.0 221 51.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 1.1e-41 174.1 212 50.9
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.5e-41 173.7 216 50.0
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.9e-41 173.3 222 49.5
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.9e-41 173.3 212 49.5
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 2.5e-41 172.9 220 48.2
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 5.5e-41 171.8 269 43.9
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 5.5e-41 171.8 211 50.7
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 6.1e-40 168.3 218 46.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.3e-39 166.4 157 57.3
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 4.0e-39 165.6 209 49.8
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 6.8e-39 164.9 243 44.4
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.2e-38 164.1 153 56.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 2.0e-38 163.3 216 47.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.7e-37 160.2 221 45.7
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 2.2e-37 159.8 216 49.1
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.2e-37 159.8 220 47.3
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 3.7e-37 159.1 217 47.0
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.7e-37 159.1 222 45.5
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 3.7e-37 159.1 214 45.8
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 4.8e-37 158.7 219 45.2
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 6.3e-37 158.3 221 45.2
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 8.3e-37 157.9 222 46.8
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 8.3e-37 157.9 218 46.3
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.4e-36 157.1 215 45.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.8e-36 156.8 221 44.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 2.4e-36 156.4 217 43.3
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 3.1e-36 156.0 230 45.7
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 7.0e-36 154.8 222 45.5
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 7.0e-36 154.8 214 47.7
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 9.1e-36 154.5 217 42.9
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 9.1e-36 154.5 217 42.9
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 2.0e-35 153.3 217 43.8
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 7.7e-35 151.4 219 46.6
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.0e-34 151.0 159 52.2
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 8.6e-34 147.9 135 61.5
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 8.6e-34 147.9 222 44.1
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.1e-33 147.5 209 44.5
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.5e-33 147.1 217 42.4
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 2.5e-33 146.4 209 43.5
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.5e-33 146.4 207 44.9
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.5e-33 146.4 220 43.6
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 4.2e-33 145.6 155 49.0
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.2e-32 144.1 166 50.0
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.0e-30 136.7 210 43.8
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 9.8e-30 134.4 122 62.3
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.3e-26 123.2 129 53.5
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 5.0e-26 122.1 215 39.1
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 3.6e-24 115.9 209 35.9
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 6.1e-24 115.2 194 40.7
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.0e-23 112.8 127 50.4
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.4e-15 87.4 128 42.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.8e-15 87.0 85 51.8
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.3e-15 86.7 87 55.2
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 6.0e-11 72.0 92 45.7
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 1.8e-07 60.5 208 26.0


User provided reference genes

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