Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.2e-77 293.1 149 100.0
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 2.7e-61 238.8 150 82.7
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 5.0e-60 234.6 150 82.7
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 3.3e-59 231.9 148 82.4
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.8e-58 228.8 148 81.1
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.8e-58 228.8 148 81.1
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.1e-58 227.6 148 79.7
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 3.0e-57 225.3 149 77.2
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 8.9e-57 223.8 151 80.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.5e-56 223.0 148 76.4
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.4e-56 221.9 139 81.3
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.4e-56 221.9 148 78.4
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 4.4e-56 221.5 151 79.5
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 5.7e-56 221.1 148 78.4
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 7.5e-56 220.7 148 77.7
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 2.9e-55 218.8 150 78.0
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 2.9e-55 218.8 139 80.6
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 2.4e-54 215.7 155 77.4
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.2e-54 215.3 139 79.1
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.1e-54 214.9 139 78.4
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 5.4e-54 214.5 170 70.0
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 5.4e-54 214.5 149 76.5
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 7.0e-54 214.2 148 75.0
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 9.2e-54 213.8 139 80.6
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.2e-53 213.4 151 76.8
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.6e-53 213.0 139 78.4
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.6e-53 213.0 139 78.4
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 2.0e-53 212.6 139 79.9
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 3.0e-52 208.8 139 77.7
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 5.0e-52 208.0 139 78.4
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 6.6e-52 207.6 142 75.4
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 6.6e-52 207.6 138 76.1
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.1e-51 206.8 139 78.4
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.9e-51 206.1 139 76.3
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 3.3e-51 205.3 142 76.8
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 4.3e-51 204.9 138 73.9
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 5.6e-51 204.5 140 76.4
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 5.6e-51 204.5 139 77.7
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 7.3e-51 204.1 143 75.5
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 9.5e-51 203.8 150 75.3
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-50 203.0 157 71.3
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-50 203.0 157 71.3
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 77.0
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 77.0
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.1e-50 202.6 139 76.3
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 2.1e-50 202.6 102 95.1
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 2.8e-50 202.2 139 76.3
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 2.8e-50 202.2 139 76.3
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 2.8e-50 202.2 139 76.3
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 3.6e-50 201.8 139 76.3
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 3.6e-50 201.8 140 77.9
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 4.7e-50 201.4 139 77.0
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 4.7e-50 201.4 138 78.3
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 6.2e-50 201.1 165 67.9
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 6.2e-50 201.1 141 75.2
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 8.0e-50 200.7 139 76.3
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 8.0e-50 200.7 139 76.3
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 8.0e-50 200.7 139 76.3
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.1e-49 200.3 139 72.7
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.1e-49 200.3 146 74.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.4e-49 199.9 160 66.2
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-49 199.9 139 74.8
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.4e-49 199.9 139 74.8
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.4e-49 199.9 140 77.9
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.4e-49 199.9 165 66.1
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 2.3e-49 199.1 139 77.0
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 2.3e-49 199.1 139 77.0
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 3.1e-49 198.7 153 71.2
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 4.0e-49 198.4 139 76.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 4.0e-49 198.4 162 66.0
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 5.2e-49 198.0 146 71.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 5.2e-49 198.0 151 71.5
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 5.2e-49 198.0 140 75.0
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 5.2e-49 198.0 144 74.3
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.8e-49 197.6 142 74.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-48 196.8 139 73.4
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.5e-48 196.4 141 73.8
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.5e-48 196.4 159 69.2
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.5e-48 196.4 139 73.4
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.0e-48 196.1 140 75.7
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.6e-48 195.7 154 68.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.4e-48 195.3 138 73.9
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.4e-48 195.3 145 72.4
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.4e-48 194.9 102 94.1
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.4e-48 194.9 102 94.1
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.4e-48 194.9 142 71.8
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 4.4e-48 194.9 121 79.3
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 5.8e-48 194.5 129 79.1
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 5.8e-48 194.5 140 75.0
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 7.5e-48 194.1 140 75.7
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 7.5e-48 194.1 139 72.7
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 9.8e-48 193.7 127 78.0
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 9.8e-48 193.7 128 78.1
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.3e-47 193.4 146 70.5
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.3e-47 193.4 140 73.6
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.2e-47 192.6 138 73.9
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.2e-47 192.6 148 69.6
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 2.9e-47 192.2 139 73.4
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.9e-47 192.2 140 73.6
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 4.9e-47 191.4 141 75.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 7.0e-46 187.6 150 67.3
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 3.5e-45 185.3 139 71.2
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 3.5e-45 185.3 148 68.2
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 7.8e-45 184.1 151 66.9
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 5.0e-44 181.4 139 69.1
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 6.6e-44 181.0 153 66.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 9.5e-43 177.2 102 84.3
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.2e-42 176.8 150 65.3
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.6e-42 176.4 142 66.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.3e-36 156.8 138 58.0
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.5e-35 153.3 97 73.2
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 5.6e-35 151.4 140 62.1
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.2e-34 150.2 147 55.1
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.4e-33 146.0 118 62.7
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 2.6e-32 142.5 94 70.2
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 5.8e-32 141.4 97 66.0
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.0e-29 131.3 139 56.1
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.5e-27 126.7 72 83.3
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.4e-24 115.5 117 53.8
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.0e-20 104.0 90 55.6
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.4e-17 93.6 53 86.8
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.8e-17 93.2 125 44.0
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 9.0e-17 90.9 51 88.2
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 9.0e-17 90.9 51 88.2
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 6.7e-12 74.7 115 38.3


User provided reference genes

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