Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 3.1e-57 224.9 116 100.0
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 2.7e-45 185.3 101 92.1
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 3.6e-45 184.9 121 79.3
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 7.9e-45 183.7 118 79.7
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.0e-44 181.8 121 77.7
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 6.7e-44 180.6 118 78.8
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 3.3e-43 178.3 112 81.2
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 8.2e-42 173.7 112 76.8
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 8.2e-42 173.7 121 75.2
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.1e-41 173.3 117 75.2
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.4e-41 172.9 119 75.6
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.8e-41 172.6 121 74.4
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.8e-41 172.6 121 73.6
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.8e-41 172.6 112 79.5
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 2.4e-41 172.2 112 75.9
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.1e-41 171.8 121 74.4
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 3.1e-41 171.8 121 75.2
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 4.1e-41 171.4 121 73.6
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 4.1e-41 171.4 99 85.9
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 4.1e-41 171.4 112 76.8
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 4.1e-41 171.4 112 78.6
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 4.1e-41 171.4 117 75.2
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.3e-41 171.0 121 74.4
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 6.9e-41 170.6 112 75.9
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 6.9e-41 170.6 117 75.2
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 9.1e-41 170.2 117 74.4
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 9.1e-41 170.2 121 74.4
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.2e-40 169.9 117 74.4
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 1.5e-40 169.5 117 74.4
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.5e-40 169.5 112 75.9
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 2.0e-40 169.1 112 77.7
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 2.0e-40 169.1 121 74.4
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 2.0e-40 169.1 113 75.2
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 2.6e-40 168.7 118 73.7
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.6e-40 168.7 113 74.3
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 3.4e-40 168.3 121 71.1
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.4e-40 168.3 118 75.4
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.4e-40 168.3 116 74.1
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.5e-40 167.9 112 77.7
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.0e-39 166.8 115 72.2
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.0e-39 166.8 121 72.7
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.7e-39 166.0 120 70.8
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 2.2e-39 165.6 121 72.7
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 2.2e-39 165.6 121 71.1
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.9e-39 165.2 112 75.0
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 6.5e-39 164.1 89 93.3
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 8.5e-39 163.7 121 71.1
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.4e-38 162.9 101 79.2
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 3.2e-38 161.8 116 72.4
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 4.2e-38 161.4 121 70.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 4.2e-38 161.4 121 69.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.2e-37 159.8 121 69.4
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.6e-37 159.5 115 67.8
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 2.1e-37 159.1 120 70.0
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 3.6e-37 158.3 115 67.0
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 3.6e-37 158.3 121 70.2
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 3.6e-37 158.3 121 71.1
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 3.6e-37 158.3 93 86.0
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 6.1e-37 157.5 114 71.9
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.8e-36 156.0 114 68.4
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.8e-36 156.0 114 69.3
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.8e-36 156.0 121 67.8
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.8e-36 156.0 121 67.8
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.3e-36 155.6 112 68.8
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 2.3e-36 155.6 114 70.2
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 2.3e-36 155.6 105 73.3
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 3.0e-36 155.2 114 68.4
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 3.0e-36 155.2 114 69.3
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 3.9e-36 154.8 114 68.4
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 5.1e-36 154.5 104 77.9
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 68.4
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 68.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 68.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 68.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 68.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.7e-36 154.1 114 70.2
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.5e-35 152.9 103 74.8
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 1.5e-35 152.9 103 74.8
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 2.0e-35 152.5 114 67.5
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.0e-35 152.5 97 73.2
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 2.6e-35 152.1 110 71.8
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 3.3e-35 151.8 106 70.8
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 3.3e-35 151.8 113 69.0
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.4e-35 151.4 115 66.1
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 5.7e-35 151.0 113 67.3
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 7.4e-35 150.6 121 66.9
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 9.7e-35 150.2 114 66.7
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.3e-34 149.8 112 64.3
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 8.2e-34 147.1 111 63.1
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.1e-33 146.7 105 69.5
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.8e-33 146.0 88 81.8
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 2.4e-33 145.6 114 65.8
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 5.3e-33 144.4 121 65.3
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 5.3e-33 144.4 102 67.6
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 5.3e-33 144.4 102 66.7
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.6e-32 142.1 146 56.2
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 2.6e-32 142.1 88 78.4
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.5e-32 141.4 89 76.4
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 5.9e-32 141.0 93 73.1
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 7.7e-32 140.6 102 64.7
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.0e-31 140.2 104 70.2
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.0e-31 140.2 101 70.3
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 1.3e-31 139.8 106 65.1
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.2e-31 139.0 102 68.6
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 3.8e-31 138.3 108 63.9
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.8e-31 138.3 109 63.3
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 3.8e-31 138.3 105 71.4
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 5.0e-31 137.9 107 63.6
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.0e-31 137.9 104 69.2
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 8.5e-31 137.1 103 68.0
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 8.5e-31 137.1 100 70.0
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 2.5e-30 135.6 98 69.4
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 2.5e-30 135.6 125 60.0
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.5e-30 135.6 94 69.1
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 9.4e-30 133.7 103 67.0
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 6.1e-29 131.0 106 59.4
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 8.0e-29 130.6 99 65.7
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.8e-28 129.4 112 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.1e-27 126.7 102 58.8
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.0e-27 125.9 104 61.5
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 9.7e-27 123.6 110 61.8
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.7e-26 122.9 98 62.2
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 8.2e-26 120.6 101 61.4
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.1e-25 120.2 101 57.4
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 2.0e-24 115.9 96 57.3
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.9e-23 112.1 93 58.1
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.2e-22 108.2 75 74.7
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.1e-21 105.9 109 56.9
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.8e-20 102.8 116 45.7
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.5e-19 99.8 70 70.0
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 8.3e-18 94.0 109 52.3
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 9.1e-17 90.5 79 58.2
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.0e-15 87.0 56 76.8
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 9.4e-14 80.5 108 43.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.0e-12 75.1 66 59.1
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.5e-11 73.2 81 50.6
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.4e-09 64.7 53 54.7
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 1.3e-07 60.1 107 33.6
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 1.5e-06 56.6 99 31.3


User provided reference genes

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