Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 1.7e-169 599.7 436 100.0
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 4.1e-110 402.5 276 74.6
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 1.4e-102 377.5 256 76.2
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 1.3e-95 354.4 432 64.1
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 4.0e-73 279.6 276 52.9
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 5.4e-70 269.2 278 52.9
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 3.9e-68 263.1 279 52.0
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 2.5e-67 260.4 279 51.3
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 3.3e-67 260.0 280 51.1
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 5.6e-67 259.2 278 48.6
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 6.2e-66 255.8 278 50.4
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 1.1e-65 255.0 278 48.6
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 9.2e-62 241.9 278 50.0
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 1.3e-60 238.0 279 46.2
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 3.9e-60 236.5 279 45.2
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 5.6e-59 232.6 278 46.0
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 7.3e-59 232.3 277 46.9
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 2.8e-58 230.3 278 44.2
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 1.4e-57 228.0 278 44.6
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.8e-57 227.6 279 45.2
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 3.1e-57 226.9 275 46.9
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 2.0e-56 224.2 275 46.5
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 2.6e-56 223.8 276 46.4
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 4.4e-56 223.0 278 45.0
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 5.8e-56 222.6 278 43.9
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 1.7e-55 221.1 278 43.5
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 3.7e-55 219.9 278 44.2
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 6.4e-55 219.2 278 42.8
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 1.9e-54 217.6 281 43.4
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 1.9e-54 217.6 278 42.1
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 3.2e-54 216.9 276 42.4
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 3.2e-54 216.9 279 43.7
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 1.6e-53 214.5 279 44.1
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 2.1e-53 214.2 276 44.9
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 2.7e-53 213.8 279 44.1
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 3.5e-53 213.4 277 41.9
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 4.6e-53 213.0 277 45.1
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 6.0e-53 212.6 274 44.5
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 7.8e-53 212.2 279 43.4
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 7.8e-53 212.2 279 41.6
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 1.3e-52 211.5 278 43.2
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 2.3e-52 210.7 278 41.4
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 2.3e-52 210.7 276 43.1
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 6.6e-52 209.1 279 44.1
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 8.6e-52 208.8 277 44.0
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 8.6e-52 208.8 279 42.3
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.9e-51 207.6 278 42.8
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 1.2e-50 204.9 280 42.1
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 2.1e-50 204.1 277 40.4
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 1.4e-49 201.4 279 40.9
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 3.1e-49 200.3 271 42.1
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 6.8e-49 199.1 231 44.6
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 8.9e-49 198.7 279 41.2
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 1.2e-48 198.4 285 41.1
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 1.2e-48 198.4 278 41.4
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.5e-48 198.0 284 40.1
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 7.6e-48 195.7 280 39.6
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 9.9e-48 195.3 285 40.4
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 2.2e-47 194.1 280 41.8
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 3.8e-47 193.4 277 40.1
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 4.9e-47 193.0 267 41.9
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 8.4e-47 192.2 275 40.0
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 1.4e-46 191.4 281 40.6
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 2.4e-46 190.7 278 37.4
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 4.2e-46 189.9 285 39.3
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 7.1e-46 189.1 275 40.7
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 7.1e-46 189.1 275 40.7
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 7.1e-46 189.1 284 39.4
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 1.2e-45 188.3 283 41.7
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 1.2e-45 188.3 283 41.7
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 1.2e-45 188.3 283 41.7
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 2.1e-45 187.6 271 40.6
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 2.7e-45 187.2 280 39.3
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 3.5e-45 186.8 278 38.5
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 1.0e-44 185.3 279 40.1
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 2.3e-44 184.1 276 39.1
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 1.9e-43 181.0 226 44.2
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 1.5e-40 171.4 277 36.1
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 5.8e-40 169.5 277 36.5
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 1.7e-39 167.9 269 38.3
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 3.8e-39 166.8 269 37.2
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.9e-38 164.5 278 37.4
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 1.9e-38 164.5 275 37.5
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 2.4e-38 164.1 276 34.4
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 1.2e-37 161.8 274 35.8
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 6.0e-37 159.5 275 35.6
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 5.6e-35 152.9 404 33.4
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 8.1e-26 122.5 167 40.1
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 3.4e-24 117.1 213 35.2
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 5.8e-24 116.3 198 36.9
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 1.0e-20 105.5 168 35.1
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 4.5e-16 90.1 94 50.0
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 5.0e-15 86.7 111 42.3
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 5.5e-14 83.2 140 37.1
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 1.0e-12 79.0 124 35.5
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 2.3e-12 77.8 87 47.1
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 2.8e-10 70.9 132 35.6
MD00G1058400 Malus domestica HOM05D007242 ORTHO05D009089 1.0e-07 62.4 39 61.5


User provided reference genes

Program Settings