Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4653 Erigeron canadensis HOM05D001961 ORTHO05D002286 8.3e-247 856.7 456 100.0
Lsat_1_v5_gn_5_18460 Lactuca sativa HOM05D001961 ORTHO05D002286 1.7e-37 161.4 166 53.6
Lsat_1_v5_gn_1_11560 Lactuca sativa HOM05D001961 ORTHO05D002286 4.1e-36 156.8 167 51.5
HanXRQChr05g0155261 Helianthus annuus HOM05D001961 ORTHO05D002286 5.3e-36 156.4 165 52.7
HanXRQChr08g0236941 Helianthus annuus HOM05D001961 ORTHO05D002286 1.2e-35 155.2 167 52.7
PGSC0003DMG400033067 Solanum tuberosum HOM05D001961 ORTHO05D002286 4.5e-35 153.3 163 53.4
Nitab4.5_0000909g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 5.9e-35 152.9 162 51.9
SGA_v2.0_scaffold114G31883 Striga asiatica HOM05D001961 ORTHO05D002286 5.9e-35 152.9 164 50.6
Nitab4.5_0000003g0050 Nicotiana tabacum HOM05D001961 ORTHO05D002286 7.7e-35 152.5 162 51.2
Sabra12G0051100 Salix brachista HOM05D001961 ORTHO05D002286 7.7e-35 152.5 166 52.4
CSS0014551 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.7e-34 151.4 166 51.8
CSS0045618 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.7e-34 151.4 166 51.8
Ciclev10018472m.g Citrus clementina HOM05D001961 ORTHO05D002286 1.7e-34 151.4 163 52.8
Cc04_g15870 Coffea canephora HOM05D001961 ORTHO05D002286 1.7e-34 151.4 166 50.6
Solyc06g071120.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 1.7e-34 151.4 163 52.8
Sopen06g027420 Solanum pennellii HOM05D001961 ORTHO05D002286 1.7e-34 151.4 163 52.8
Migut.I00114 Erythranthe guttata HOM05D001961 ORTHO05D002286 2.9e-34 150.6 159 53.5
Peaxi162Scf00689g00564 Petunia axillaris HOM05D001961 ORTHO05D002286 5.0e-34 149.8 163 50.9
Sabra15G0091600 Salix brachista HOM05D001961 ORTHO05D002286 5.0e-34 149.8 161 52.8
GSVIVG01008079001 Vitis vinifera HOM05D001961 ORTHO05D002286 5.0e-34 149.8 165 49.7
QL10p014874 Quercus lobata HOM05D001961 ORTHO05D002286 6.5e-34 149.4 165 50.9
vmacro19421 Vaccinium macrocarpon HOM05D001961 ORTHO05D002286 8.5e-34 149.1 166 51.2
Oeu020375.1 Olea europaea HOM05D001961 ORTHO05D002286 1.1e-33 148.7 162 50.6
Dinv19903 Davidia involucrata HOM05D001961 ORTHO05D002286 1.4e-33 148.3 165 49.7
Oeu039544.2 Olea europaea HOM05D001961 ORTHO05D002286 1.9e-33 147.9 162 50.0
Rhsim08G0161300 Rhododendron simsii HOM05D001961 ORTHO05D002286 1.9e-33 147.9 166 50.0
Manes.14G073702 Manihot esculenta HOM05D001961 ORTHO05D002286 2.5e-33 147.5 166 49.4
Potri.012G071900 Populus trichocarpa HOM05D001961 ORTHO05D002286 2.5e-33 147.5 166 51.2
Potri.015G066500 Populus trichocarpa HOM05D001961 ORTHO05D002286 2.5e-33 147.5 161 52.2
Duzib068G1318 Durio zibethinus HOM05D001961 ORTHO05D002286 3.2e-33 147.1 166 50.0
Lj9C457G12 Lonicera japonica HOM05D001961 ORTHO05D002286 3.2e-33 147.1 166 48.2
SalBow7G0691 Salvia bowleyana HOM05D001961 ORTHO05D002286 7.2e-33 146.0 161 49.1
Actinidia34975 Actinidia chinensis HOM05D001961 ORTHO05D002286 9.4e-33 145.6 163 49.7
MELO3C017148.2 Cucumis melo HOM05D001961 ORTHO05D002286 9.4e-33 145.6 162 49.4
Lj5C117T8 Lonicera japonica HOM05D001961 ORTHO05D002286 9.4e-33 145.6 161 51.6
Duzib205G1945 Durio zibethinus HOM05D001961 ORTHO05D002286 1.2e-32 145.2 165 50.3
SalBow5G1786 Salvia bowleyana HOM05D001961 ORTHO05D002286 1.2e-32 145.2 162 50.0
SGA_v2.0_scaffold7G04090 Striga asiatica HOM05D001961 ORTHO05D002286 1.6e-32 144.8 164 48.2
Dinv38651 Davidia involucrata HOM05D001961 ORTHO05D002286 2.1e-32 144.4 165 48.5
COL.COLO4_35465 Corchorus olitorius HOM05D001961 ORTHO05D002286 2.7e-32 144.1 162 48.8
FvH4_5g15740 Fragaria vesca HOM05D001961 ORTHO05D002286 3.6e-32 143.7 165 49.1
Manes.06G097300 Manihot esculenta HOM05D001961 ORTHO05D002286 3.6e-32 143.7 163 49.1
CsaV3_1G002070 Cucumis sativus L. HOM05D001961 ORTHO05D002286 4.7e-32 143.3 163 49.7
Thecc.03G077100 Theobroma cacao HOM05D001961 ORTHO05D002286 6.1e-32 142.9 165 49.1
unitig_744.g24389 Utricularia gibba HOM05D001961 ORTHO05D002286 6.1e-32 142.9 164 48.8
DCAR_021541 Daucus carota HOM05D001961 ORTHO05D002286 8.0e-32 142.5 162 46.9
FAN08G2604 Fragaria x ananassa HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
FAN13G0464 Fragaria x ananassa HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
FAN18G4418 Fragaria x ananassa HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
Gohir.A11G028810 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
Gohir.D03G090700 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.0e-32 142.5 163 50.9
Gohir.D11G032100 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
Gorai.003G070500 Gossypium raimondii HOM05D001961 ORTHO05D002286 8.0e-32 142.5 163 50.9
Gorai.007G034900 Gossypium raimondii HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 48.5
Hma1.2p1_0002F.1_g003390 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 8.0e-32 142.5 165 47.3
ATR1153G111 Amborella trichopoda HOM05D001961 ORTHO05D002286 1.0e-31 142.1 164 49.4
FAN04G1134 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.8e-31 141.4 165 47.9
Peaxi162Scf00009g00524 Petunia axillaris HOM05D001961 ORTHO05D002286 3.0e-31 140.6 163 48.5
Sed0025522 Sechium edule HOM05D001961 ORTHO05D002286 3.0e-31 140.6 162 48.8
Solyc03g113370.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 5.2e-31 139.8 160 48.8
Sopen03g032420 Solanum pennellii HOM05D001961 ORTHO05D002286 5.2e-31 139.8 160 48.8
MSTRG.11404 Avicennia marina HOM05D001961 ORTHO05D002286 6.7e-31 139.4 164 48.2
Prupe.5G184600 Prunus persica HOM05D001961 ORTHO05D002286 6.7e-31 139.4 162 48.8
ClCG06G016460 Citrullus lanatus HOM05D001961 ORTHO05D002286 8.8e-31 139.0 162 48.8
TWI60G1556 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 8.8e-31 139.0 166 45.8
PGR083G2262 Punica granatum HOM05D001961 ORTHO05D002286 1.1e-30 138.7 166 47.6
TWI15G0443 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 1.5e-30 138.3 166 45.2
THA.LOC104821450 Tarenaya hassleriana HOM05D001961 ORTHO05D002286 3.3e-30 137.1 166 47.0
arahy.Tifrunner.gnm1.ann1.DV6TYS Arachis hypogaea HOM05D001961 ORTHO05D002286 5.7e-30 136.3 157 47.1
arahy.Tifrunner.gnm1.ann1.LMB17M Arachis hypogaea HOM05D001961 ORTHO05D002286 5.7e-30 136.3 157 47.1
PGSC0003DMG400013181 Solanum tuberosum HOM05D001961 ORTHO05D002286 5.7e-30 136.3 167 47.3
CARHR156620 Cardamine hirsuta HOM05D001961 ORTHO05D002286 7.4e-30 136.0 159 47.8
RcHm_v2.0_Chr7g0180371 Rosa chinensis HOM05D001961 ORTHO05D002286 7.4e-30 136.0 165 46.1
MD06G1185800 Malus domestica HOM05D001961 ORTHO05D002286 9.7e-30 135.6 161 48.4
TWI81G0197 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 9.7e-30 135.6 166 45.8
Nn4g23006 Nelumbo nucifera HOM05D001961 ORTHO05D002286 1.3e-29 135.2 166 46.4
Aa31LG11G1000 Aethionema arabicum HOM05D001961 ORTHO05D002286 1.7e-29 134.8 162 45.7
Cfa019014 Carpinus fangiana HOM05D001961 ORTHO05D002286 1.7e-29 134.8 166 47.0
Eucgr.B00398 Eucalyptus grandis HOM05D001961 ORTHO05D002286 2.8e-29 134.0 165 44.8
TAR374G1240 Trochodendron aralioides HOM05D001961 ORTHO05D002286 2.8e-29 134.0 166 44.6
Aa31LG4G16560 Aethionema arabicum HOM05D001961 ORTHO05D002286 3.7e-29 133.7 166 47.0
Haze_07394 Corylus avellana HOM05D001961 ORTHO05D002286 3.7e-29 133.7 166 46.4
Nn3g17102 Nelumbo nucifera HOM05D001961 ORTHO05D002286 4.8e-29 133.3 166 47.0
AL5G27220 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 1.1e-28 132.1 154 49.4
Carub.0005s1403 Capsella rubella HOM05D001961 ORTHO05D002286 1.1e-28 132.1 154 48.7
MD14G1192000 Malus domestica HOM05D001961 ORTHO05D002286 1.1e-28 132.1 159 46.5
Sc04g0002330 Simmondsia chinensis HOM05D001961 ORTHO05D002286 1.1e-28 132.1 163 48.5
Thhalv10010059m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 1.4e-28 131.7 232 40.9
Atru.chr9.2337 Acer truncatum HOM05D001961 ORTHO05D002286 1.8e-28 131.3 161 49.7
AT3G47890 Arabidopsis thaliana HOM05D001961 ORTHO05D002286 1.8e-28 131.3 154 49.4
CARHR156630 Cardamine hirsuta HOM05D001961 ORTHO05D002286 2.4e-28 131.0 161 47.2
Hund02679 Selenicereus undatus HOM05D001961 ORTHO05D002286 3.1e-28 130.6 163 46.0
A06p19750 Brassica napus HOM05D001961 ORTHO05D002286 4.1e-28 130.2 221 39.4
BraA06t25054Z Brassica rapa HOM05D001961 ORTHO05D002286 4.1e-28 130.2 221 39.4
CANSAT80G1878 Cannabis sativa HOM05D001961 ORTHO05D002286 4.1e-28 130.2 170 44.7
Lj1g0021908 Lotus japonicus HOM05D001961 ORTHO05D002286 5.3e-28 129.8 160 46.9
AL5G27230 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 7.0e-28 129.4 154 49.4
A06p19720 Brassica napus HOM05D001961 ORTHO05D002286 7.0e-28 129.4 221 39.4
BraA06t25050Z Brassica rapa HOM05D001961 ORTHO05D002286 7.0e-28 129.4 221 39.4
Lalb_Chr12g0201211 Lupinus albus HOM05D001961 ORTHO05D002286 1.2e-27 128.6 165 44.2
AT3G47910 Arabidopsis thaliana HOM05D001961 ORTHO05D002286 1.6e-27 128.3 154 49.4
CDE06G2189 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 1.6e-27 128.3 161 46.6
CDE07G1845 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 2.6e-27 127.5 161 46.0
CAN.G628.49 Capsicum annuum HOM05D001961 ORTHO05D002286 3.5e-27 127.1 136 52.9
Actinidia37665 Actinidia chinensis HOM05D001961 ORTHO05D002286 4.5e-27 126.7 172 45.9
Aqoxy3G03236 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 4.5e-27 126.7 164 43.3
MBI01_g01232_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 4.5e-27 126.7 162 47.5
Thhalv10010060m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 5.9e-27 126.3 164 45.1
Oeu022639.1 Olea europaea HOM05D001961 ORTHO05D002286 5.9e-27 126.3 160 43.8
Lalb_Chr13g0298141 Lupinus albus HOM05D001961 ORTHO05D002286 7.7e-27 125.9 165 43.6
Migut.I00115 Erythranthe guttata HOM05D001961 ORTHO05D002286 1.0e-26 125.6 161 43.5
PSO591G0439 Papaver somniferum HOM05D001961 ORTHO05D002286 1.3e-26 125.2 167 44.9
AUR62008343 Chenopodium quinoa HOM05D001961 ORTHO05D002286 2.2e-26 124.4 165 44.8
AUR62021754 Chenopodium quinoa HOM05D001961 ORTHO05D002286 3.8e-26 123.6 165 45.5
PSO161G0075 Papaver somniferum HOM05D001961 ORTHO05D002286 3.8e-26 123.6 168 44.6
PSO832G1192 Papaver somniferum HOM05D001961 ORTHO05D002286 8.5e-26 122.5 167 44.3
BcaC01g01766 Brassica carinata HOM05D001961 ORTHO05D002286 1.1e-25 122.1 221 37.6
C03p72140 Brassica napus HOM05D001961 ORTHO05D002286 1.1e-25 122.1 221 37.6
C03p72190 Brassica napus HOM05D001961 ORTHO05D002286 1.1e-25 122.1 221 37.6
BolC3t19515H Brassica oleracea HOM05D001961 ORTHO05D002286 1.1e-25 122.1 221 37.6
Carub.0005s1404 Capsella rubella HOM05D001961 ORTHO05D002286 1.5e-25 121.7 161 43.5
PSO478G4671 Papaver somniferum HOM05D001961 ORTHO05D002286 2.5e-25 120.9 168 44.0
EL10Ac5g10921 Beta vulgaris HOM05D001961 ORTHO05D002286 7.2e-25 119.4 166 44.6
BcaB02g10685 Brassica carinata HOM05D001961 ORTHO05D002286 9.4e-25 119.0 166 42.8
Ah.02g113120 Amaranthus hybridus HOM05D001961 ORTHO05D002286 1.2e-24 118.6 170 43.5
Ca_21858_v3 Cicer arietinum L. HOM05D001961 ORTHO05D002286 1.2e-24 118.6 166 41.6
SEGI_13866 Sequoiadendron giganteum HOM05D001961 ORTHO05D002286 1.2e-24 118.6 152 41.4
HPP92_023511 Vanilla planifolia HOM05D001961 ORTHO05D002286 1.2e-24 118.6 164 44.5
HPP92_023556 Vanilla planifolia HOM05D001961 ORTHO05D002286 1.2e-24 118.6 164 44.5
Gohir.A03G064400 Gossypium hirsutum HOM05D001961 ORTHO05D002286 2.1e-24 117.9 136 50.7
Sp5g14040 Schrenkiella parvula HOM05D001961 ORTHO05D002286 4.7e-24 116.7 169 42.6
VMungo1215G0372 Vigna mungo HOM05D001961 ORTHO05D002286 4.7e-24 116.7 166 41.0
TPR.G38388 Trifolium pratense HOM05D001961 ORTHO05D002286 6.1e-24 116.3 174 38.5
Hund09373 Selenicereus undatus HOM05D001961 ORTHO05D002286 1.0e-23 115.5 159 44.0
Sp5g14050 Schrenkiella parvula HOM05D001961 ORTHO05D002286 1.8e-23 114.8 162 45.1
Lj4g0028007 Lotus japonicus HOM05D001961 ORTHO05D002286 3.0e-23 114.0 165 38.2
Phvul.003G194200 Phaseolus vulgaris HOM05D001961 ORTHO05D002286 5.2e-23 113.2 166 39.8
Pp3c16_3030 Physcomitrium patens HOM05D001961 ORTHO05D002286 5.2e-23 113.2 160 43.8
Ah.11g048820 Amaranthus hybridus HOM05D001961 ORTHO05D002286 8.8e-23 112.5 164 40.9
Glyma.05G031000 Glycine max HOM05D001961 ORTHO05D002286 2.0e-22 111.3 166 39.8
Glyma.17G095800 Glycine max HOM05D001961 ORTHO05D002286 2.6e-22 110.9 166 40.4
Medtr4g107470 Medicago truncatula HOM05D001961 ORTHO05D002286 2.6e-22 110.9 166 39.8
BcaB05g23091 Brassica carinata HOM05D001961 ORTHO05D002286 7.5e-22 109.4 170 39.4
DCAR_026083 Daucus carota HOM05D001961 ORTHO05D002286 3.7e-21 107.1 164 39.6
MBI04_g20669_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 5.3e-20 103.2 184 38.0
Oeu006173.1 Olea europaea HOM05D001961 ORTHO05D002286 5.3e-20 103.2 117 48.7
CAN.G999.31 Capsicum annuum HOM05D001961 ORTHO05D002286 1.2e-19 102.1 115 47.0
BcaC01g01759 Brassica carinata HOM05D001961 ORTHO05D002286 2.7e-19 100.9 166 38.0
TAR622G0827 Trochodendron aralioides HOM05D001961 ORTHO05D002286 2.2e-18 97.8 163 36.8
Dinv33700 Davidia involucrata HOM05D001961 ORTHO05D002286 2.9e-18 97.4 187 37.4
Dinv33730 Davidia involucrata HOM05D001961 ORTHO05D002286 2.9e-18 97.4 177 35.6
PSO161G0094 Papaver somniferum HOM05D001961 ORTHO05D002286 5.5e-17 93.2 163 36.8
Psat4g054160 Pisum sativum HOM05D001961 ORTHO05D002286 3.6e-16 90.5 139 39.6
Dinv33705 Davidia involucrata HOM05D001961 ORTHO05D002286 6.1e-16 89.7 181 35.4
Rhsim10G0032100 Rhododendron simsii HOM05D001961 ORTHO05D002286 3.0e-15 87.4 167 36.5
Rhsim10G0031400 Rhododendron simsii HOM05D001961 ORTHO05D002286 1.2e-14 85.5 167 35.9
Actinidia06060 Actinidia chinensis HOM05D001961 ORTHO05D002286 3.7e-13 80.5 215 27.0
Oeu006172.1 Olea europaea HOM05D001961 ORTHO05D002286 4.8e-13 80.1 166 36.1
BcaB01g00866 Brassica carinata HOM05D001961 ORTHO05D002286 1.1e-12 79.0 84 47.6
Dinv33701 Davidia involucrata HOM05D001961 ORTHO05D002286 9.1e-12 75.9 212 32.5
Dinv33704 Davidia involucrata HOM05D001961 ORTHO05D002286 5.9e-11 73.2 220 29.1
Cfa011655 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.3e-10 72.0 152 29.6
Haze_05897 Corylus avellana HOM05D001961 ORTHO05D002286 2.3e-10 71.2 144 31.2
Actinidia36031 Actinidia chinensis HOM05D001961 ORTHO05D002286 3.8e-10 70.5 153 34.0
GSVIVG01032595001 Vitis vinifera HOM05D001961 ORTHO05D002286 5.0e-10 70.1 118 34.7
Cfa000802 Carpinus fangiana HOM05D001961 ORTHO05D002286 1.1e-09 68.9 179 31.3
Haze_05896 Corylus avellana HOM05D001961 ORTHO05D002286 1.6e-08 65.1 178 28.1
Oeu022619.1 Olea europaea HOM05D001961 ORTHO05D002286 2.1e-08 64.7 190 31.1
Nn1g04369 Nelumbo nucifera HOM05D001961 ORTHO05D002286 3.6e-08 63.9 70 44.3
BolC3t19510H Brassica oleracea HOM05D001961 ORTHO05D002286 4.7e-08 63.5 128 30.5
Cpa.g.sc17.186 Carica papaya HOM05D001961 ORTHO05D002286 2.3e-07 61.2 182 30.2
Haze_06878 Corylus avellana HOM05D001961 ORTHO05D002286 5.2e-07 60.1 118 31.4
Aqoxy4G02900 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 8.9e-07 59.3 179 30.2
Aqoxy4G02898 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.5e-06 58.5 130 32.3
Cfa009801 Carpinus fangiana HOM05D001961 ORTHO05D002286 2.6e-06 57.8 98 30.6
Haze_05891 Corylus avellana HOM05D001961 ORTHO05D002286 4.4e-06 57.0 136 29.4
Aqoxy4G02909 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 7.5e-06 56.2 76 43.4
Cfa009800 Carpinus fangiana HOM05D001961 ORTHO05D002286 9.8e-06 55.8 126 31.0


User provided reference genes

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