Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 0.0e+00 1085.1 562 100.0
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 2.7e-191 672.5 581 62.7
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 5.0e-177 625.2 565 60.4
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.4e-155 553.9 604 52.2
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 7.7e-154 548.1 590 51.7
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 9.5e-152 541.2 621 49.6
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 3.6e-151 539.3 572 50.9
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 8.9e-150 534.6 577 50.8
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 2.4e-147 526.6 593 49.6
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 9.2e-147 524.6 576 52.1
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 1.2e-146 524.2 569 50.3
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 1.6e-146 523.9 610 52.1
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 4.6e-146 522.3 587 49.7
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 7.8e-146 521.5 604 49.0
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 6.2e-143 511.9 594 47.8
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 1.0e-142 511.1 577 48.7
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.4e-142 510.8 620 47.4
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 2.6e-141 506.5 590 48.0
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 7.5e-141 505.0 573 48.2
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 1.7e-140 503.8 582 47.8
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 1.7e-140 503.8 590 48.3
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 1.7e-140 503.8 589 47.7
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 3.7e-140 502.7 572 49.7
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 4.9e-140 502.3 591 48.1
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 1.1e-139 501.1 591 52.5
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 4.1e-139 499.2 573 48.2
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 3.9e-137 492.7 581 47.8
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 6.6e-137 491.9 627 49.1
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 7.3e-136 488.4 574 47.6
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 7.3e-136 488.4 459 54.9
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 1.2e-135 487.6 579 46.6
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 6.2e-135 485.3 585 47.7
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 4.0e-134 482.6 589 47.0
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 4.0e-134 482.6 625 45.3
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 1.5e-133 480.7 595 47.2
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 2.0e-133 480.3 654 46.8
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 3.4e-133 479.6 600 48.3
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 4.4e-133 479.2 615 48.8
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 5.8e-133 478.8 617 48.9
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.3e-132 477.6 581 45.4
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 1.3e-132 477.6 615 45.5
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 6.4e-132 475.3 587 45.1
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 1.1e-131 474.6 573 47.3
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 2.4e-131 473.4 658 43.8
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 6.0e-130 468.8 452 52.0
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 1.7e-129 467.2 664 42.6
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 1.7e-129 467.2 574 47.7
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 8.6e-129 464.9 589 44.3
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 1.9e-128 463.8 572 46.2
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 6.2e-127 458.8 581 46.5
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 6.2e-127 458.8 592 43.9
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 1.4e-126 457.6 591 44.5
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 3.1e-126 456.4 657 42.2
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 1.2e-125 454.5 606 43.6
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.0e-125 453.8 573 45.4
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 5.8e-125 452.2 636 42.6
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-123 448.0 594 44.8
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 1.9e-123 447.2 562 44.7
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 4.6e-122 442.6 560 45.0
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 6.0e-122 442.2 581 44.2
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 7.8e-122 441.8 612 45.1
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 7.8e-122 441.8 612 45.1
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 1.3e-121 441.0 478 50.0
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 1.7e-121 440.7 555 45.4
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 3.0e-121 439.9 572 42.8
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 4.3e-120 436.0 578 46.5
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 4.3e-120 436.0 568 44.2
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 4.3e-120 436.0 498 45.6
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 5.6e-120 435.6 579 44.0
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 2.1e-119 433.7 561 43.9
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.8e-119 433.3 573 41.4
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 2.8e-119 433.3 568 44.2
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.8e-119 433.3 510 46.9
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 8.1e-119 431.8 583 41.9
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 1.1e-118 431.4 583 41.7
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.4e-118 431.0 566 44.7
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 3.1e-118 429.9 427 53.6
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 5.2e-118 429.1 562 43.6
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 5.2e-118 429.1 572 42.0
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 6.8e-118 428.7 565 43.4
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 2.0e-117 427.2 564 42.2
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 4.4e-117 426.0 561 42.4
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 1.3e-116 424.5 573 41.4
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.7e-116 424.1 531 45.2
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 3.8e-116 422.9 568 42.4
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 3.8e-116 422.9 570 43.2
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 6.4e-116 422.2 564 43.6
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.4e-115 420.2 534 49.6
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 4.2e-115 419.5 433 53.1
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 6.0e-114 415.6 612 42.6
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 7.8e-114 415.2 476 48.1
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 3.3e-112 409.8 575 42.6
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.4e-110 403.7 509 44.8
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 2.7e-106 390.2 561 41.0
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 1.0e-105 388.3 563 39.8
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 5.6e-104 382.5 569 38.1
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 1.1e-102 378.3 563 41.4
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 9.0e-102 375.2 558 39.8
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 2.2e-100 370.5 503 42.9
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 4.2e-99 366.3 569 39.4
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 1.8e-94 350.9 351 53.6
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 1.2e-90 338.2 595 39.2
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 5.7e-88 329.3 651 35.3
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 6.3e-87 325.9 443 43.1
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 1.8e-86 324.3 468 42.9
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.4e-86 323.9 355 51.0
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 1.5e-85 321.2 434 39.6
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 1.0e-84 318.5 441 40.8
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 1.1e-83 315.1 570 35.3
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 7.2e-83 312.4 427 39.6
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 6.1e-82 309.3 346 46.0
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 1.1e-78 298.5 481 38.7
AUR62002481 Chenopodium quinoa HOM05D003812 ORTHO05D004393 5.5e-75 286.2 303 48.5
RcHm_v2.0_Chr2g0084521 Rosa chinensis HOM05D003812 ORTHO05D004393 6.1e-74 282.7 339 46.6
FAN23G1808 Fragaria x ananassa HOM05D003812 ORTHO05D004393 6.9e-70 269.2 345 44.1
Ah.13g073180 Amaranthus hybridus HOM05D003812 ORTHO05D004393 2.7e-66 257.3 233 51.1
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 2.7e-66 257.3 238 57.1
Lalb_Chr05g0212031 Lupinus albus HOM05D003812 ORTHO05D004393 1.8e-65 254.6 312 46.2
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 5.7e-64 249.6 236 53.0
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.6e-61 241.5 268 51.9
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 4.2e-59 233.4 305 43.0
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 8.2e-55 219.2 297 41.1
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 1.1e-54 218.8 235 48.1
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 1.8e-54 218.0 234 52.1
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.6e-53 214.9 243 47.7
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 7.7e-53 212.6 227 50.7
HanXRQChr17g0553321 Helianthus annuus HOM05D003812 ORTHO05D004393 1.1e-51 208.8 223 52.9
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 4.7e-50 203.4 274 46.0
Hma1.2p1_0381F.1_g140060 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 4.0e-49 200.3 156 57.1
Cc06_g19240 Coffea canephora HOM05D003812 ORTHO05D004393 3.4e-48 197.2 133 69.2
Haze_11132 Corylus avellana HOM05D003812 ORTHO05D004393 1.7e-47 194.9 338 37.6
Carub.0005s1565 Capsella rubella HOM05D003812 ORTHO05D004393 5.0e-44 183.3 283 38.2
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 8.0e-42 176.0 317 35.3
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 2.0e-40 171.4 224 47.8
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.3e-39 168.7 184 50.0
Oeu022463.3 Olea europaea HOM05D003812 ORTHO05D004393 1.3e-39 168.7 384 35.4
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.8e-39 167.5 166 52.4
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.4e-38 165.2 184 49.5
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.8e-38 164.9 184 49.5
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 9.2e-38 162.5 184 48.9
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 9.2e-38 162.5 184 48.9
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 9.2e-38 162.5 184 48.9
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 2.0e-37 161.4 188 47.3
TAR636G0254 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.1e-35 155.6 264 40.2
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 1.2e-34 152.1 182 48.4
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 8.9e-33 146.0 154 50.6
ATR0580G030 Amborella trichopoda HOM05D003812 ORTHO05D004393 1.6e-29 135.2 241 36.1
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 1.0e-28 132.5 622 22.3
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.5e-27 127.9 108 58.3
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 6.2e-26 123.2 174 40.2
arahy.Tifrunner.gnm1.ann1.NBB910 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.2e-24 119.0 103 54.4
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 3.4e-24 117.5 136 45.6
arahy.Tifrunner.gnm1.ann1.WBRQ5K Arachis hypogaea HOM05D003812 ORTHO05D004393 4.4e-24 117.1 181 40.9
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 4.4e-24 117.1 186 39.2
Sc13g0007560 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.3e-23 115.5 99 55.6
arahy.Tifrunner.gnm1.ann1.C22IND Arachis hypogaea HOM05D003812 ORTHO05D004393 2.9e-23 114.4 97 54.6
Hund12301 Selenicereus undatus HOM05D003812 ORTHO05D004393 8.3e-23 112.8 244 42.6
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 7.8e-21 106.3 120 48.3
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.2e-16 92.4 100 45.0
arahy.Tifrunner.gnm1.ann1.8MB3N8 Arachis hypogaea HOM05D003812 ORTHO05D004393 4.9e-15 87.0 82 51.2
arahy.Tifrunner.gnm1.ann1.SF8VIF Arachis hypogaea HOM05D003812 ORTHO05D004393 1.6e-13 82.0 77 50.6
SEGI_01468 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 2.1e-13 81.6 69 53.6
Os01g0528000 Oryza sativa ssp. japonica HOM05D003812 ORTHO05D004393 7.8e-13 79.7 142 35.2
Nn1g08161 Nelumbo nucifera HOM05D003812 ORTHO05D004393 2.5e-11 74.7 204 33.3
FAN20G1426 Fragaria x ananassa HOM05D003812 ORTHO05D004393 2.3e-09 68.2 105 43.8
Cc06_g19280 Coffea canephora HOM05D003812 ORTHO05D004393 3.1e-09 67.8 85 49.4
SEGI_03594 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 4.4e-08 63.9 46 65.2
vmacro06690 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 2.9e-07 61.2 46 67.4
vmacro06692 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 6.4e-07 60.1 80 52.5
FvH4_2g23680 Fragaria vesca HOM05D003812 ORTHO05D004393 2.4e-06 58.2 109 39.4
Hma1.2p1_0381F.1_g140070 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 2.4e-06 58.2 50 74.0
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 4.1e-06 57.4 344 22.1
Hund12275 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.4e-06 57.0 200 37.0


User provided reference genes

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