Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 6.4e-174 614.0 311 100.0
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 9.9e-135 483.8 312 78.2
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 2.3e-131 472.6 309 77.7
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 3.9e-115 418.7 315 67.0
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.4e-114 414.5 312 65.7
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.4e-114 414.5 312 65.7
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 3.1e-112 409.1 311 65.3
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 2.6e-111 406.0 315 65.4
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 2.2e-110 402.9 311 65.6
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.0e-110 401.7 312 65.4
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 8.5e-110 401.0 318 63.2
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.9e-109 399.8 312 63.8
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 5.5e-109 398.3 314 64.6
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 5.5e-109 398.3 299 65.2
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 7.2e-109 397.9 306 63.4
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 4.6e-108 395.2 313 63.9
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 4.6e-108 395.2 313 64.2
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.0e-107 394.0 306 63.7
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.0e-107 394.0 307 63.5
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 1.0e-107 394.0 314 64.0
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 1.4e-107 393.7 303 65.7
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.4e-107 393.7 313 64.2
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.8e-107 393.3 311 64.3
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 3.0e-107 392.5 308 63.6
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 3.0e-107 392.5 311 63.0
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 8.8e-107 391.0 309 64.7
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.1e-106 390.6 317 63.4
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.5e-106 390.2 317 63.7
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.0e-106 389.8 312 64.4
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 4.3e-106 388.7 312 62.8
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 7.4e-106 387.9 310 61.6
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 9.7e-106 387.5 309 64.1
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.2e-105 386.3 318 63.5
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 6.3e-105 384.8 263 72.2
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 6.9e-104 381.3 258 72.5
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 9.1e-104 380.9 316 60.1
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 9.1e-104 380.9 339 59.9
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.5e-103 380.2 307 61.9
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 3.4e-103 379.0 319 62.1
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 4.5e-103 378.6 273 69.2
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.2e-102 376.3 284 64.8
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 8.5e-102 374.4 304 60.9
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 2.5e-101 372.9 309 60.2
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 3.2e-101 372.5 310 59.4
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 3.2e-101 372.5 318 59.1
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 3.2e-101 372.5 262 69.8
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 7.2e-101 371.3 311 59.5
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 7.2e-101 371.3 261 70.5
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 9.4e-101 370.9 310 61.0
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 9.4e-101 370.9 308 61.0
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 9.4e-101 370.9 307 61.9
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 4.7e-100 368.6 345 57.4
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 7.9e-100 367.9 318 59.4
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 1.0e-99 367.5 262 69.1
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-99 367.1 308 59.4
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 3.0e-99 365.9 314 60.8
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 5.1e-99 365.2 268 66.8
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 5.1e-99 365.2 306 59.5
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 6.7e-99 364.8 312 60.9
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 8.8e-99 364.4 315 59.4
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.1e-98 364.0 277 66.1
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 2.0e-98 363.2 305 59.7
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-97 359.8 301 59.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 2.8e-97 359.4 309 58.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 2.8e-97 359.4 253 67.2
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 4.8e-97 358.6 314 60.2
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 6.3e-97 358.2 257 68.9
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.1e-96 357.5 264 66.7
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-96 357.1 301 59.5
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.8e-96 356.7 314 57.0
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 3.1e-96 355.9 316 57.3
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 4.1e-96 355.5 310 58.1
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.1e-96 355.5 262 65.6
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 7.0e-96 354.8 307 59.6
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 2.6e-95 352.8 309 60.5
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 1.3e-94 350.5 262 66.4
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 6.5e-94 348.2 262 64.5
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.5e-93 347.1 310 58.1
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 4.2e-93 345.5 307 58.3
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.4e-93 344.4 295 59.7
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 6.1e-92 341.7 333 53.8
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.0e-91 340.9 261 62.5
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.8e-91 340.1 296 60.8
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 5.2e-91 338.6 254 66.1
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 5.2e-91 338.6 307 57.0
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.4e-90 335.5 304 57.2
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 7.4e-90 334.7 311 56.9
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 2.8e-89 332.8 315 56.5
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 4.8e-89 332.0 258 63.2
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.2e-87 327.4 276 59.4
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.3e-86 323.9 279 60.6
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 2.2e-86 323.2 260 61.5
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 8.5e-86 321.2 309 53.4
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 5.7e-82 308.5 315 50.2
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 3.5e-79 299.3 329 49.8
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.7e-76 289.7 350 46.3
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 3.6e-76 289.3 251 58.6
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.8e-75 287.0 245 59.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 1.2e-74 284.3 373 47.5
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.4e-72 277.3 264 53.8
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.6e-71 273.9 258 56.6
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.1e-69 267.7 248 56.5
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.6e-66 256.5 196 67.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 7.5e-66 255.0 190 62.1
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 5.0e-62 242.3 257 50.6
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.5e-61 240.7 165 70.9
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 2.5e-61 240.0 196 61.7
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 8.9e-59 231.5 164 70.1
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.3e-57 227.6 282 45.4
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 3.7e-57 226.1 263 45.2
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 6.0e-55 218.8 266 42.1
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-48 197.6 146 66.4
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 5.4e-48 195.7 158 60.1
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 4.3e-45 186.0 210 49.0
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 6.4e-33 145.6 279 33.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 1.2e-31 141.4 144 51.4
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 3.9e-30 136.3 169 48.5
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.5e-29 133.7 163 47.9
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.6e-29 132.5 153 51.0
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 6.2e-28 129.0 127 52.0
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 4.4e-26 122.9 185 42.2
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-25 121.3 84 65.5
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.1e-24 118.2 210 34.8
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.1e-24 118.2 281 33.8
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 2.7e-23 113.6 85 64.7
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.3e-21 106.3 92 56.5
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.8e-19 100.9 79 62.0
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-17 94.7 68 60.3
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.8e-17 93.2 65 63.1


User provided reference genes

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