Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4377 Erigeron canadensis HOM05D007566 ORTHO05D009505 3.7e-43 177.9 100 100.0
Lsat_1_v5_gn_5_6820 Lactuca sativa HOM05D007566 ORTHO05D009505 8.7e-32 140.2 100 85.0
HanXRQChr05g0151621 Helianthus annuus HOM05D007566 ORTHO05D009505 4.3e-31 137.9 102 83.3
Rhsim06G0192900 Rhododendron simsii HOM05D007566 ORTHO05D009505 3.5e-17 91.7 103 59.2
DCAR_009984 Daucus carota HOM05D007566 ORTHO05D009505 1.3e-16 89.7 104 57.7
Dinv08341 Davidia involucrata HOM05D007566 ORTHO05D009505 1.8e-16 89.4 98 59.2
GSVIVG01014436001 Vitis vinifera HOM05D007566 ORTHO05D009505 6.7e-16 87.4 107 57.0
Oeu030434.1 Olea europaea HOM05D007566 ORTHO05D009505 1.1e-15 86.7 104 59.6
EL10Ac4g08058 Beta vulgaris HOM05D007566 ORTHO05D009505 1.5e-15 86.3 102 59.8
Migut.M01859 Erythranthe guttata HOM05D007566 ORTHO05D009505 2.5e-15 85.5 103 58.3
Phvul.005G086000 Phaseolus vulgaris HOM05D007566 ORTHO05D009505 3.3e-15 85.1 102 60.8
PGR083G0896 Punica granatum HOM05D007566 ORTHO05D009505 5.6e-15 84.3 101 55.4
Nitab4.5_0000297g0110 Nicotiana tabacum HOM05D007566 ORTHO05D009505 9.6e-15 83.6 101 56.4
PSO541G1909 Papaver somniferum HOM05D007566 ORTHO05D009505 9.6e-15 83.6 101 48.5
Psat5g246560 Pisum sativum HOM05D007566 ORTHO05D009505 1.3e-14 83.2 103 57.3
Ah.04g165410 Amaranthus hybridus HOM05D007566 ORTHO05D009505 1.6e-14 82.8 100 56.0
Lalb_Chr25g0286741 Lupinus albus HOM05D007566 ORTHO05D009505 1.6e-14 82.8 103 57.3
PSO675G4296 Papaver somniferum HOM05D007566 ORTHO05D009505 1.6e-14 82.8 101 47.5
Cc05_g12690 Coffea canephora HOM05D007566 ORTHO05D009505 3.7e-14 81.6 104 54.8
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla HOM05D007566 ORTHO05D009505 3.7e-14 81.6 107 53.3
TAR627G0519 Trochodendron aralioides HOM05D007566 ORTHO05D009505 3.7e-14 81.6 102 53.9
Actinidia39409 Actinidia chinensis HOM05D007566 ORTHO05D009505 6.2e-14 80.9 102 55.9
Glyma.12G219500 Glycine max HOM05D007566 ORTHO05D009505 6.2e-14 80.9 103 60.2
Manes.15G083200 Manihot esculenta HOM05D007566 ORTHO05D009505 8.1e-14 80.5 101 55.4
TPR.G32847 Trifolium pratense HOM05D007566 ORTHO05D009505 1.1e-13 80.1 102 55.9
Hund23375 Selenicereus undatus HOM05D007566 ORTHO05D009505 1.8e-13 79.3 104 52.9
TWI39G1107 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 1.8e-13 79.3 102 57.8
Lj3g0013461 Lotus japonicus HOM05D007566 ORTHO05D009505 2.4e-13 79.0 101 57.4
Glyma.13G281800 Glycine max HOM05D007566 ORTHO05D009505 3.1e-13 78.6 103 56.3
MD11G1237100 Malus domestica HOM05D007566 ORTHO05D009505 4.0e-13 78.2 101 53.5
CANSAT11G1965 Cannabis sativa HOM05D007566 ORTHO05D009505 5.3e-13 77.8 101 52.5
FvH4_3g21000 Fragaria vesca HOM05D007566 ORTHO05D009505 5.3e-13 77.8 100 54.0
FAN11G3987 Fragaria x ananassa HOM05D007566 ORTHO05D009505 5.3e-13 77.8 100 54.0
Prupe.4G190300 Prunus persica HOM05D007566 ORTHO05D009505 5.3e-13 77.8 101 54.5
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea HOM05D007566 ORTHO05D009505 2.6e-12 75.5 109 51.4
Solyc07g063575.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 3.4e-12 75.1 100 53.0
Sopen07g031760 Solanum pennellii HOM05D007566 ORTHO05D009505 3.4e-12 75.1 100 53.0
PGSC0003DMG401019249 Solanum tuberosum HOM05D007566 ORTHO05D009505 3.4e-12 75.1 100 53.0
COL.COLO4_09480 Corchorus olitorius HOM05D007566 ORTHO05D009505 5.8e-12 74.3 102 51.0
FAN25G3649 Fragaria x ananassa HOM05D007566 ORTHO05D009505 5.8e-12 74.3 100 52.0
Zm00001eb106900 Zea mays HOM05D007566 ORTHO05D009505 5.8e-12 74.3 111 49.5
Medtr2g080990 Medicago truncatula HOM05D007566 ORTHO05D009505 7.6e-12 73.9 106 50.9
TAR371G0602 Trochodendron aralioides HOM05D007566 ORTHO05D009505 7.6e-12 73.9 106 50.0
Duzib213G0757 Durio zibethinus HOM05D007566 ORTHO05D009505 1.0e-11 73.6 101 51.5
Sc16g0006770 Simmondsia chinensis HOM05D007566 ORTHO05D009505 1.0e-11 73.6 100 52.0
CsaV3_3G005960 Cucumis sativus L. HOM05D007566 ORTHO05D009505 1.7e-11 72.8 101 51.5
MELO3C016554.2 Cucumis melo HOM05D007566 ORTHO05D009505 2.2e-11 72.4 102 51.0
SGA_v2.0_scaffold73G24317 Striga asiatica HOM05D007566 ORTHO05D009505 2.2e-11 72.4 120 46.7
CiPaw.11G176600 Carya illinoinensis HOM05D007566 ORTHO05D009505 4.9e-11 71.2 102 51.0
unitig_0.g2051 Utricularia gibba HOM05D007566 ORTHO05D009505 6.5e-11 70.9 107 51.4
Aqoxy1G02746 Aquilegia oxysepala HOM05D007566 ORTHO05D009505 8.4e-11 70.5 106 49.1
Atru.chr2.2863 Acer truncatum HOM05D007566 ORTHO05D009505 1.1e-10 70.1 101 49.5
Thecc.07G071100 Theobroma cacao HOM05D007566 ORTHO05D009505 1.1e-10 70.1 101 50.5
Aa31LG5G10140 Aethionema arabicum HOM05D007566 ORTHO05D009505 1.4e-10 69.7 103 47.6
RcHm_v2.0_Chr5g0035981 Rosa chinensis HOM05D007566 ORTHO05D009505 1.4e-10 69.7 100 50.0
MSTRG.15205 Avicennia marina HOM05D007566 ORTHO05D009505 1.9e-10 69.3 104 51.9
Ciclev10010014m.g Citrus clementina HOM05D007566 ORTHO05D009505 1.9e-10 69.3 102 52.9
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea HOM05D007566 ORTHO05D009505 4.2e-10 68.2 109 48.6
DCAR_022487 Daucus carota HOM05D007566 ORTHO05D009505 4.2e-10 68.2 71 60.6
Cpa.g.sc389.3 Carica papaya HOM05D007566 ORTHO05D009505 5.5e-10 67.8 101 52.5
Potri.001G406900 Populus trichocarpa HOM05D007566 ORTHO05D009505 5.5e-10 67.8 101 50.5
Sabra16G0268300 Salix brachista HOM05D007566 ORTHO05D009505 9.3e-10 67.0 102 52.0
Sabra16G0270600 Salix brachista HOM05D007566 ORTHO05D009505 9.3e-10 67.0 102 52.0
Eucgr.F01078 Eucalyptus grandis HOM05D007566 ORTHO05D009505 2.1e-09 65.9 103 51.5
THA.LOC104811846 Tarenaya hassleriana HOM05D007566 ORTHO05D009505 2.1e-09 65.9 103 46.6
ClCG10G006500 Citrullus lanatus HOM05D007566 ORTHO05D009505 2.7e-09 65.5 101 45.5
CDE05G3101 Ceratophyllum demersum HOM05D007566 ORTHO05D009505 3.5e-09 65.1 101 47.5
Nitab4.5_0008686g0030 Nicotiana tabacum HOM05D007566 ORTHO05D009505 3.5e-09 65.1 101 48.5
BcaNung07200 Brassica carinata HOM05D007566 ORTHO05D009505 6.0e-09 64.3 106 46.2
C01p23510 Brassica napus HOM05D007566 ORTHO05D009505 6.0e-09 64.3 106 46.2
BolC1t02296H Brassica oleracea HOM05D007566 ORTHO05D009505 6.0e-09 64.3 106 46.2
Os07g0562900 Oryza sativa ssp. japonica HOM05D007566 ORTHO05D009505 6.0e-09 64.3 112 42.0
AUR62015600 Chenopodium quinoa HOM05D007566 ORTHO05D009505 1.3e-08 63.2 102 47.1
TWI38G1712 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 1.3e-08 63.2 55 69.1
A01p18560 Brassica napus HOM05D007566 ORTHO05D009505 2.3e-08 62.4 108 46.3
VMungo0647G1906 Vigna mungo HOM05D007566 ORTHO05D009505 5.1e-08 61.2 55 70.9
BraA01t01804Z Brassica rapa HOM05D007566 ORTHO05D009505 8.7e-08 60.5 105 44.8
Sp7g25310 Schrenkiella parvula HOM05D007566 ORTHO05D009505 1.5e-07 59.7 104 43.3
GSVIVG01014434001 Vitis vinifera HOM05D007566 ORTHO05D009505 1.9e-07 59.3 94 51.1
vmacro11813 Vaccinium macrocarpon HOM05D007566 ORTHO05D009505 3.3e-07 58.5 56 67.9
Gohir.A01G068600 Gossypium hirsutum HOM05D007566 ORTHO05D009505 2.1e-06 55.8 101 43.6
Solyc10g047330.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 2.8e-06 55.5 100 47.0
Nn1g03914 Nelumbo nucifera HOM05D007566 ORTHO05D009505 3.7e-06 55.1 102 44.1
Peaxi162Scf01216g00052 Petunia axillaris HOM05D007566 ORTHO05D009505 6.2e-06 54.3 65 58.5
Gohir.D01G055900 Gossypium hirsutum HOM05D007566 ORTHO05D009505 8.2e-06 53.9 101 42.6


User provided reference genes

Program Settings