Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4235 Erigeron canadensis HOM05D007124 ORTHO05D008980 2.7e-92 342.4 231 100.0
Nitab4.5_0010969g0020 Nicotiana tabacum HOM05D007124 ORTHO05D008980 2.3e-19 100.1 50 92.0
Nitab4.5_0000755g0100 Nicotiana tabacum HOM05D007124 ORTHO05D008980 3.0e-19 99.8 50 90.0
Peaxi162Scf00040g00004 Petunia axillaris HOM05D007124 ORTHO05D008980 3.0e-19 99.8 50 90.0
Sopen11g027200 Solanum pennellii HOM05D007124 ORTHO05D008980 5.1e-19 99.0 50 90.0
PGSC0003DMG400026339 Solanum tuberosum HOM05D007124 ORTHO05D008980 5.1e-19 99.0 50 90.0
Lsat_1_v5_gn_5_3160 Lactuca sativa HOM05D007124 ORTHO05D008980 6.7e-19 98.6 50 92.0
Eucgr.F00713 Eucalyptus grandis HOM05D007124 ORTHO05D008980 1.5e-18 97.4 50 90.0
FAN16G3348 Fragaria x ananassa HOM05D007124 ORTHO05D008980 1.5e-18 97.4 78 64.1
CSS0008346 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 1.9e-18 97.1 50 88.0
CSS0015017 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 1.9e-18 97.1 50 88.0
CSS0017817 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 1.9e-18 97.1 50 88.0
CiPaw.12G132500 Carya illinoinensis HOM05D007124 ORTHO05D008980 3.3e-18 96.3 63 74.6
PGR004G2244 Punica granatum HOM05D007124 ORTHO05D008980 3.3e-18 96.3 50 88.0
CANSAT11G2294 Cannabis sativa HOM05D007124 ORTHO05D008980 4.3e-18 95.9 50 86.0
Hma1.2p1_0036F.1_g023250 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 4.3e-18 95.9 50 88.0
CSS0011277 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 5.6e-18 95.5 50 86.0
Hma1.2p1_1332F.1_g276070 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 5.6e-18 95.5 50 88.0
THA.LOC104811625 Tarenaya hassleriana HOM05D007124 ORTHO05D008980 5.6e-18 95.5 50 86.0
CiPaw.11G193400 Carya illinoinensis HOM05D007124 ORTHO05D008980 7.4e-18 95.1 63 73.0
FvH4_3g23350 Fragaria vesca HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
FAN02G4031 Fragaria x ananassa HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
FAN05G4905 Fragaria x ananassa HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
FAN21G2784 Fragaria x ananassa HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
FAN25G2055 Fragaria x ananassa HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
RcHm_v2.0_Chr5g0041121 Rosa chinensis HOM05D007124 ORTHO05D008980 9.6e-18 94.7 50 84.0
Ciclev10010691m.g Citrus clementina HOM05D007124 ORTHO05D008980 1.3e-17 94.4 50 84.0
Cpa.g.sc12.260 Carica papaya HOM05D007124 ORTHO05D008980 1.6e-17 94.0 50 86.0
Ciclev10009664m.g Citrus clementina HOM05D007124 ORTHO05D008980 1.6e-17 94.0 50 82.0
QL08p007019 Quercus lobata HOM05D007124 ORTHO05D008980 1.6e-17 94.0 50 88.0
Sed0025305 Sechium edule HOM05D007124 ORTHO05D008980 1.6e-17 94.0 50 84.0
FAN11G2242 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.1e-17 93.6 50 82.0
Psat0s3039g0080 Pisum sativum HOM05D007124 ORTHO05D008980 2.1e-17 93.6 50 86.0
Prupe.4G220900 Prunus persica HOM05D007124 ORTHO05D008980 2.1e-17 93.6 50 84.0
SGA_v2.0_scaffold120G32846 Striga asiatica HOM05D007124 ORTHO05D008980 2.1e-17 93.6 71 67.6
Migut.H01802 Erythranthe guttata HOM05D007124 ORTHO05D008980 2.8e-17 93.2 50 86.0
Manes.12G070300 Manihot esculenta HOM05D007124 ORTHO05D008980 3.7e-17 92.8 50 84.0
Oeu013124.1 Olea europaea HOM05D007124 ORTHO05D008980 3.7e-17 92.8 50 86.0
Aa31LG3G11120 Aethionema arabicum HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
ATR0317G094 Amborella trichopoda HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Cfa020296 Carpinus fangiana HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Glyma.10G051000 Glycine max HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Glyma.13G138500 Glycine max HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Glyma.13G152338 Glycine max HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Lj6g0008322 Lotus japonicus HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Lalb_Chr15g0089611 Lupinus albus HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Lalb_Chr18g0059321 Lupinus albus HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Medtr2g014910 Medicago truncatula HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Medtr2g014940 Medicago truncatula HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Nn1g07252 Nelumbo nucifera HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 82.0
Phvul.006G180400 Phaseolus vulgaris HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
Sp6g17060 Schrenkiella parvula HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 84.0
TWI39G0219 Tripterygium wilfordii HOM05D007124 ORTHO05D008980 4.8e-17 92.4 50 86.0
Duzib170G0848 Durio zibethinus HOM05D007124 ORTHO05D008980 6.2e-17 92.0 50 86.0
Duzib213G1022 Durio zibethinus HOM05D007124 ORTHO05D008980 6.2e-17 92.0 50 86.0
SGA_v2.0_scaffold363G49951 Striga asiatica HOM05D007124 ORTHO05D008980 6.2e-17 92.0 50 84.0
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 84.0
AL8G30630 Arabidopsis lyrata HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 82.0
AT5G55125 Arabidopsis thaliana HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 82.0
Carub.0008s1542 Capsella rubella HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 82.0
DCAR_009645 Daucus carota HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 84.0
Potri.001G314100 Populus trichocarpa HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 84.0
Sabra16G0198600 Salix brachista HOM05D007124 ORTHO05D008980 8.2e-17 91.7 50 84.0
arahy.Tifrunner.gnm1.ann1.902QMU Arachis hypogaea HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BcaB08g35876 Brassica carinata HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BcaC03g14263 Brassica carinata HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
A02p09870 Brassica napus HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
A10p12390 Brassica napus HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
C02p16400 Brassica napus HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
C09p45870 Brassica napus HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BolC2t07742H Brassica oleracea HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BraA02t06051Z Brassica rapa HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BraA10t43334Z Brassica rapa HOM05D007124 ORTHO05D008980 1.1e-16 91.3 50 82.0
BcaC04g20268 Brassica carinata HOM05D007124 ORTHO05D008980 1.4e-16 90.9 50 80.0
BolC9t57437H Brassica oleracea HOM05D007124 ORTHO05D008980 1.4e-16 90.9 50 80.0
Haze_09723 Corylus avellana HOM05D007124 ORTHO05D008980 1.8e-16 90.5 50 82.0
FvH4_6g31480 Fragaria vesca HOM05D007124 ORTHO05D008980 1.8e-16 90.5 50 82.0
SHI10538 Sapria himalayana HOM05D007124 ORTHO05D008980 1.8e-16 90.5 50 84.0
Actinidia32270 Actinidia chinensis HOM05D002089 ORTHO05D002848 2.4e-16 90.1 50 76.0
arahy.Tifrunner.gnm1.ann1.E6QS8A Arachis hypogaea HOM05D007124 ORTHO05D008980 2.4e-16 90.1 50 80.0
Ca_00376_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 2.4e-16 90.1 50 80.0
Ca_00400_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 2.4e-16 90.1 50 80.0
Os11g0516100 Oryza sativa ssp. japonica HOM05D007124 ORTHO05D008980 3.1e-16 89.7 50 78.0
Psat1g201480 Pisum sativum HOM05D007124 ORTHO05D008980 3.1e-16 89.7 50 82.0
Sc12g0005860 Simmondsia chinensis HOM05D007124 ORTHO05D008980 3.1e-16 89.7 50 82.0
Thhalv10015372m.g Eutrema salsugineum HOM05D007124 ORTHO05D008980 5.3e-16 89.0 50 80.0
CARHR268480 Cardamine hirsuta HOM05D007124 ORTHO05D008980 6.9e-16 88.6 50 80.0
MBI15_g24201_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 9.0e-16 88.2 50 78.0
Thecc.07G030700 Theobroma cacao HOM05D007124 ORTHO05D008980 9.0e-16 88.2 50 82.0
Gohir.1Z049637 Gossypium hirsutum HOM05D007124 ORTHO05D008980 1.5e-15 87.4 50 80.0
Gohir.D05G373400 Gossypium hirsutum HOM05D007124 ORTHO05D008980 1.5e-15 87.4 50 80.0
Gorai.009G442100 Gossypium raimondii HOM05D007124 ORTHO05D008980 1.5e-15 87.4 50 80.0
MBI08_g04916_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 2.0e-15 87.0 50 76.0
Cc05_g14150 Coffea canephora HOM05D007124 ORTHO05D008980 2.6e-15 86.7 50 76.0
Ah.15g092770 Amaranthus hybridus HOM05D007124 ORTHO05D008980 4.5e-15 85.9 50 78.0
EL10Ac7g17641 Beta vulgaris HOM05D007124 ORTHO05D008980 4.5e-15 85.9 50 78.0
AUR62008759 Chenopodium quinoa HOM05D007124 ORTHO05D008980 4.5e-15 85.9 50 78.0
AUR62025479 Chenopodium quinoa HOM05D007124 ORTHO05D008980 4.5e-15 85.9 50 78.0
PSO675G6679 Papaver somniferum HOM05D007124 ORTHO05D008980 7.6e-15 85.1 50 76.0
HPP92_015305 Vanilla planifolia HOM05D007124 ORTHO05D008980 1.0e-14 84.7 50 72.0
Glyma.10G069200 Glycine max HOM05D007124 ORTHO05D008980 1.7e-14 84.0 48 81.2
Aqoxy1G03004 Aquilegia oxysepala HOM05D007124 ORTHO05D008980 3.8e-14 82.8 50 74.0
vmacro13375 Vaccinium macrocarpon HOM05D007124 ORTHO05D008980 6.5e-14 82.0 50 76.0
MELO3C004505.2 Cucumis melo HOM05D007124 ORTHO05D008980 8.4e-14 81.6 50 76.0
Solyc11g068490.1 Solanum lycopersicum HOM05D007124 ORTHO05D008980 8.4e-14 81.6 42 88.1
CsaV3_2G002880 Cucumis sativus L. HOM05D007124 ORTHO05D008980 3.2e-13 79.7 50 72.0
HanXRQChr08g0233551 Helianthus annuus HOM05D007124 ORTHO05D008980 2.1e-12 77.0 42 81.0
MD03G1195200 Malus domestica HOM05D007124 ORTHO05D008980 4.6e-12 75.9 42 83.3
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 1.3e-11 74.3 42 81.0
BcaB05g22183 Brassica carinata HOM05D007124 ORTHO05D008980 1.9e-10 70.5 42 76.2


User provided reference genes

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