Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.0e-126 454.1 221 100.0
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 2.5e-100 369.0 222 83.3
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.2e-95 351.7 209 82.3
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.7e-80 303.1 222 66.7
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.0e-77 292.4 226 63.3
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 6.7e-77 291.2 226 62.4
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.1e-76 290.4 225 61.8
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.3e-76 288.9 222 63.5
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-75 287.0 223 62.8
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.8e-75 285.8 229 62.4
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 4.8e-75 285.0 220 63.2
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 6.3e-75 284.6 226 60.2
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 8.2e-75 284.3 226 64.2
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 8.2e-75 284.3 229 62.4
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.4e-74 282.7 221 62.4
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.5e-73 280.0 226 59.7
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 5.9e-73 278.1 229 60.7
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.0e-72 277.3 221 62.9
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.0e-72 277.3 230 59.6
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.3e-72 276.9 230 60.0
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.7e-72 276.6 222 61.7
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 5.0e-72 275.0 222 62.2
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.4e-71 273.5 225 60.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.4e-71 273.5 227 60.4
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.2e-71 271.9 222 63.1
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.5e-71 271.6 226 60.2
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 5.5e-71 271.6 223 59.6
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 7.2e-71 271.2 221 61.1
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 9.4e-71 270.8 249 55.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 9.4e-71 270.8 222 61.3
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 9.4e-71 270.8 221 60.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 9.4e-71 270.8 229 59.0
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 9.4e-71 270.8 226 59.7
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.2e-70 270.4 223 60.1
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.6e-70 270.0 226 61.1
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.6e-70 270.0 226 58.8
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.6e-70 270.0 223 60.5
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.1e-70 269.6 222 62.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 2.1e-70 269.6 227 57.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 2.1e-70 269.6 227 58.1
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 3.6e-70 268.9 227 58.1
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.6e-70 268.9 226 59.3
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.7e-70 268.5 222 61.3
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.7e-70 268.5 223 61.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.0e-69 267.3 222 60.4
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.4e-69 266.9 223 60.5
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-69 266.9 222 61.7
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.4e-69 266.9 222 60.8
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.4e-69 266.9 229 59.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.8e-69 266.5 226 58.4
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 3.0e-69 265.8 225 61.3
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 3.9e-69 265.4 229 56.8
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.9e-69 265.4 222 60.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 3.9e-69 265.4 227 58.6
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 6.7e-69 264.6 224 58.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 4.4e-68 261.9 226 56.2
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 5.7e-68 261.5 228 57.0
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 5.7e-68 261.5 228 57.0
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 7.4e-68 261.2 227 59.5
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.3e-67 260.4 224 57.1
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.3e-67 260.4 224 57.1
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.2e-67 259.6 227 57.3
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.7e-67 258.8 227 54.2
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 6.3e-67 258.1 227 57.3
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.4e-66 256.9 227 58.1
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.4e-66 256.9 227 58.1
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.4e-66 256.9 223 55.2
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.4e-66 256.1 204 61.8
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 7.0e-66 254.6 228 55.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.2e-65 253.8 226 56.2
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.3e-64 250.4 254 53.9
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 2.2e-64 249.6 221 55.7
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 2.9e-64 249.2 222 57.2
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.9e-64 249.2 221 55.7
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.9e-64 249.2 225 56.0
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 3.8e-64 248.8 224 54.9
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.8e-64 248.8 221 56.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.9e-63 246.5 222 55.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.2e-63 245.7 223 56.1
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 5.5e-63 245.0 222 55.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 9.4e-63 244.2 222 56.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.2e-62 243.8 226 55.8
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.2e-62 243.8 222 55.0
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.2e-62 243.8 227 54.2
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.6e-62 243.4 221 55.2
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.1e-62 243.0 221 54.3
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 3.6e-62 242.3 229 55.5
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 4.7e-62 241.9 221 54.3
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 6.1e-62 241.5 222 54.1
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.0e-61 240.7 221 54.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.8e-61 240.0 223 55.2
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 5.7e-60 235.0 227 51.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 8.2e-59 231.1 149 69.8
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.1e-58 228.8 231 53.7
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 4.7e-54 215.3 149 63.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-52 210.3 122 79.5
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-52 210.3 122 79.5
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-52 209.5 183 55.7
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 9.1e-50 201.1 122 74.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 6.5e-48 194.9 122 73.0
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 5.5e-47 191.8 189 48.1
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 6.1e-46 188.3 242 44.6
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.0e-41 173.3 148 54.1
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.2e-38 164.1 157 45.9
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 8.0e-38 161.4 169 46.2
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.0e-32 144.4 187 39.6
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 9.5e-23 111.3 74 70.3
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.2e-20 104.4 74 66.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 9.8e-20 101.3 63 73.0
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.3e-19 100.9 80 63.8
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 9.5e-15 84.7 95 46.3
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.6e-14 84.0 57 63.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.8e-14 83.2 96 45.8
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 3.6e-14 82.8 55 65.5
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 3.6e-14 82.8 49 71.4
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-13 80.9 168 34.5
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 5.2e-13 79.0 53 64.2
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.1e-10 71.2 153 37.3
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.2e-09 67.8 108 36.1


User provided reference genes

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