Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 2.0e-231 805.4 416 100.0
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.2e-204 716.5 411 87.1
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.4e-202 707.2 417 85.9
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 3.2e-189 665.2 412 80.3
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.5e-189 664.5 412 80.3
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.2e-181 638.6 401 79.1
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 1.7e-177 626.3 413 75.3
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 5.0e-174 614.8 408 75.2
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.5e-173 613.2 415 75.4
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 3.2e-173 612.1 409 74.1
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 2.1e-172 609.4 408 73.3
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 3.6e-172 608.6 414 72.7
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 4.7e-172 608.2 409 74.3
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.0e-171 607.1 409 72.6
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 1.8e-171 606.3 408 73.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 3.0e-171 605.5 408 73.0
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 4.0e-171 605.1 413 72.9
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 6.7e-171 604.4 401 73.6
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 6.7e-171 604.4 409 74.1
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.5e-170 603.2 409 73.8
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.5e-170 603.2 417 73.1
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.0e-170 602.8 435 71.0
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.6e-170 602.4 409 74.1
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 5.7e-170 601.3 408 74.0
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 2.2e-169 599.4 420 71.9
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 2.8e-169 599.0 406 75.4
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 6.3e-169 597.8 409 74.3
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 6.3e-169 597.8 409 74.3
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 8.2e-169 597.4 409 74.3
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.1e-168 597.0 413 73.1
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 5.3e-168 594.7 413 72.2
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 7.0e-168 594.3 413 72.2
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.6e-167 593.2 409 73.1
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.7e-167 592.4 401 74.1
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 4.5e-167 591.7 413 72.9
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 3.8e-166 588.6 401 73.3
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 6.5e-166 587.8 422 72.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 7.2e-165 584.3 455 65.9
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.6e-164 583.2 409 70.9
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 1.4e-163 580.1 409 71.9
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.0e-163 578.9 414 72.5
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 3.0e-163 578.9 415 70.6
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.2e-162 577.0 415 69.9
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 4.4e-162 575.1 409 70.4
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 9.8e-162 573.9 447 67.6
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 2.2e-161 572.8 409 70.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 3.7e-161 572.0 415 70.1
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.4e-160 570.1 409 68.5
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 1.4e-160 570.1 410 70.0
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 4.1e-160 568.5 409 69.7
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 9.1e-160 567.4 452 66.2
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 4.5e-159 565.1 458 65.3
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 5.9e-159 564.7 409 68.5
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 5.9e-159 564.7 408 69.1
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 1.3e-158 563.5 408 68.9
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.7e-158 563.1 416 68.0
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.9e-158 562.4 406 69.7
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.5e-158 561.2 404 70.5
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 1.9e-157 559.7 417 69.5
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.9e-157 559.7 407 68.3
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 1.2e-156 557.0 408 66.9
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 8.0e-156 554.3 413 66.1
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 8.0e-156 554.3 415 67.2
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 3.0e-155 552.4 409 67.0
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 6.8e-155 551.2 413 68.3
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 5.7e-154 548.1 413 68.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 6.3e-153 544.7 443 63.0
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 1.1e-152 543.9 410 66.3
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.1e-152 543.9 409 67.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 9.2e-152 540.8 408 67.9
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.7e-151 539.3 408 67.2
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 4.5e-151 538.5 438 63.0
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 7.7e-151 537.7 438 62.8
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 3.8e-150 535.4 404 68.1
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 5.0e-150 535.0 409 65.3
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 4.3e-149 531.9 409 64.8
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 7.3e-149 531.2 476 59.7
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 2.8e-148 529.3 404 67.1
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.4e-147 526.9 439 64.5
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.0e-147 525.8 404 66.3
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.7e-145 520.0 448 60.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.1e-144 517.3 381 68.8
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 2.4e-144 516.2 453 58.3
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.6e-143 513.5 333 76.6
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 3.5e-143 512.3 344 75.3
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.8e-143 511.1 430 64.4
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 3.9e-142 508.8 409 65.0
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 1.2e-140 503.8 414 64.0
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 8.0e-140 501.1 413 63.7
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 5.2e-139 498.4 369 68.6
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 6.8e-139 498.0 436 60.3
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.7e-137 493.4 420 60.2
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 1.2e-135 487.3 415 61.9
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 8.1e-132 474.6 410 58.0
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 7.5e-130 468.0 303 77.6
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 7.8e-127 458.0 330 68.8
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.4e-123 447.2 408 58.3
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 5.1e-118 428.7 318 69.5
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.2e-116 424.1 283 76.0
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-112 410.6 409 56.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.7e-105 387.1 282 69.1
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.4e-99 367.5 412 50.0
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.1e-99 366.3 208 87.0
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 4.0e-99 365.9 423 48.0
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 9.0e-99 364.8 258 70.9
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 3.4e-98 362.8 266 69.5
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 4.2e-96 355.9 421 47.5
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 7.9e-95 351.7 212 82.1
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 8.7e-94 348.2 233 75.5
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 3.3e-85 319.7 318 55.3
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 4.1e-83 312.8 363 50.4
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 2.1e-79 300.4 242 62.4
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 6.9e-75 285.4 373 45.0
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 5.9e-74 282.3 310 50.3
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 7.9e-71 271.9 292 50.7
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.9e-64 250.8 225 58.2
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.0e-58 230.7 138 79.7
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 1.1e-56 224.9 166 69.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 2.1e-55 220.7 397 35.5
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.4e-54 218.0 137 77.4
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.4e-51 207.2 125 79.2
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.7e-50 203.8 147 70.1
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 8.0e-47 192.2 179 53.6
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.2e-45 188.3 406 34.0
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 5.7e-37 159.5 306 35.9
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 7.0e-35 152.5 149 57.0
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 2.5e-32 144.1 108 69.4
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 3.0e-30 137.1 87 78.2
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 4.0e-30 136.7 99 68.7
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 8.6e-25 119.0 96 62.5
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.5e-21 108.2 363 27.8
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 8.3e-20 102.4 114 53.5
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.9e-19 101.3 130 43.1
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 9.2e-19 99.0 100 45.0
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.7e-17 94.7 79 58.2
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.1e-16 92.0 65 64.6
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 9.5e-16 89.0 54 81.5


User provided reference genes

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