Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 3.3e-50 201.8 113 100.0
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 4.4e-42 174.9 115 83.5
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 3.5e-39 165.2 113 79.6
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 4.4e-34 148.3 113 69.0
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.5e-34 147.5 113 69.9
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.5e-34 147.5 113 69.9
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 7.5e-34 147.5 108 74.1
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 3.7e-33 145.2 113 70.8
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 6.3e-33 144.4 113 70.8
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 1.1e-32 143.7 115 68.7
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.4e-32 143.3 112 69.6
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.4e-32 143.3 113 68.1
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 3.1e-32 142.1 112 69.6
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 3.1e-32 142.1 116 69.0
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.1e-32 142.1 113 68.1
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.1e-32 142.1 113 68.1
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 3.1e-32 142.1 113 67.3
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 4.1e-32 141.7 112 69.6
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 4.1e-32 141.7 115 67.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 5.4e-32 141.4 113 68.1
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 7.0e-32 141.0 109 71.6
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.6e-31 139.8 115 67.0
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.0e-31 139.4 108 71.3
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 2.7e-31 139.0 115 64.3
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 2.7e-31 139.0 115 68.7
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 7.7e-31 137.5 112 66.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 7.7e-31 137.5 113 67.3
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.3e-30 136.7 111 70.3
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.7e-30 136.3 120 67.5
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 1.7e-30 136.3 113 65.5
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 2.3e-30 136.0 108 68.5
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.3e-30 136.0 110 68.2
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 2.3e-30 136.0 107 71.0
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-30 136.0 107 71.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-30 136.0 107 71.0
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 2.3e-30 136.0 108 65.7
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 2.9e-30 135.6 111 70.3
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 3.8e-30 135.2 108 66.7
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 3.8e-30 135.2 107 69.2
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 3.8e-30 135.2 116 65.5
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 5.0e-30 134.8 114 68.4
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 6.6e-30 134.4 110 70.9
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 6.6e-30 134.4 111 69.4
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 6.6e-30 134.4 111 69.4
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 6.6e-30 134.4 110 70.0
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.6e-30 134.4 113 68.1
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 8.6e-30 134.0 107 70.1
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 1.1e-29 133.7 111 69.4
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.1e-29 133.7 113 62.8
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 1.1e-29 133.7 110 64.5
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 1.1e-29 133.7 111 67.6
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 1.5e-29 133.3 108 71.3
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.5e-29 133.3 109 65.1
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.5e-29 133.3 108 65.7
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.5e-29 133.3 108 65.7
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 1.9e-29 132.9 108 70.4
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.5e-29 132.5 109 67.0
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 5.5e-29 131.3 109 66.1
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 9.5e-29 130.6 114 64.9
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 9.5e-29 130.6 108 69.4
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 9.5e-29 130.6 108 67.6
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.2e-28 130.2 111 67.6
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.2e-28 130.2 108 63.9
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.6e-28 129.8 113 61.9
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 2.1e-28 129.4 108 65.7
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.1e-28 129.4 108 63.9
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.1e-28 129.4 109 66.1
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 2.8e-28 129.0 113 65.5
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 2.8e-28 129.0 113 65.5
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 3.6e-28 128.6 108 66.7
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 4.7e-28 128.3 110 66.4
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 6.1e-28 127.9 115 60.9
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 8.0e-28 127.5 113 61.9
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.0e-27 127.1 107 67.3
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 2.3e-27 125.9 127 58.3
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 4.0e-27 125.2 105 66.7
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 4.0e-27 125.2 108 69.4
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 5.2e-27 124.8 115 62.6
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 5.2e-27 124.8 108 62.0
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 8.9e-27 124.0 109 64.2
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.2e-26 123.6 109 67.0
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.0e-26 122.9 114 61.4
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 3.4e-26 122.1 91 73.6
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.4e-26 122.1 112 60.7
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.4e-26 122.1 112 60.7
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 7.5e-26 120.9 89 73.0
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 9.8e-26 120.6 114 60.5
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.7e-25 118.6 90 71.1
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 4.9e-25 118.2 89 75.3
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 8.3e-25 117.5 112 63.4
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 8.3e-25 117.5 123 57.7
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.1e-24 117.1 86 70.9
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.4e-24 115.9 114 58.8
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 5.4e-24 114.8 126 58.7
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 7.0e-24 114.4 108 61.1
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 1.2e-23 113.6 114 57.9
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 1.6e-23 113.2 108 59.3
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.0e-23 112.8 116 61.2
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.6e-23 111.7 111 57.7
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 7.8e-23 110.9 112 54.5
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 3.3e-21 105.5 90 62.2
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 4.7e-20 101.7 109 52.3
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.1e-19 99.0 109 55.0
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.0e-19 98.6 110 51.8
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.5e-18 94.4 123 50.4
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.4e-16 90.1 86 59.3
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.4e-16 89.4 77 62.3
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 3.5e-15 85.5 89 56.2
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 3.5e-15 85.5 113 47.8
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 8.6e-14 80.9 74 56.8
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 8.6e-14 80.9 51 76.5
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.2e-12 77.0 71 62.0
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 5.2e-11 71.6 75 53.3
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.5e-10 70.1 50 66.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.5e-10 70.1 50 66.0
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.4e-10 68.9 106 44.3
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 6.4e-09 64.7 108 41.7


User provided reference genes

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