Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 9.9e-133 476.9 255 100.0
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 3.9e-60 235.7 272 56.6
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 9.9e-48 194.5 260 48.1
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.1e-46 191.0 292 43.8
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.9e-46 190.3 228 50.9
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 2.4e-46 189.9 228 51.8
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 3.2e-46 189.5 240 48.8
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 4.1e-46 189.1 292 43.5
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 9.2e-46 188.0 236 49.6
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 2.1e-45 186.8 238 50.4
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 2.1e-45 186.8 289 44.6
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.7e-45 186.4 226 47.8
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.5e-43 179.9 242 44.6
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.2e-42 177.6 228 48.2
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.6e-42 177.2 229 47.6
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 1.6e-42 177.2 229 47.6
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.6e-42 177.2 237 52.7
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.1e-41 174.5 248 46.0
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 1.4e-41 174.1 288 43.1
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.4e-41 174.1 275 42.5
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 1.8e-41 173.7 224 46.4
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 2.4e-41 173.3 230 46.5
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 3.1e-41 172.9 244 47.1
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 8.9e-41 171.4 224 47.3
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.5e-40 170.6 228 45.6
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 1.5e-40 170.6 332 39.8
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 1.5e-40 170.6 294 42.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 2.6e-40 169.9 227 45.8
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 1.3e-39 167.5 284 40.8
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 2.9e-39 166.4 226 46.5
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.9e-39 166.4 294 40.8
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 2.9e-39 166.4 294 40.8
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 3.8e-39 166.0 242 44.2
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 4.9e-39 165.6 322 41.0
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 6.4e-39 165.2 220 44.5
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 1.1e-38 164.5 230 43.5
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.9e-38 163.7 244 42.6
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 1.9e-38 163.7 298 38.6
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 4.2e-38 162.5 294 40.5
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.6e-37 160.6 246 42.7
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.1e-37 160.2 234 42.7
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 2.7e-37 159.8 219 46.1
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 2.7e-37 159.8 243 43.6
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 2.7e-37 159.8 247 42.5
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 3.5e-37 159.5 221 44.3
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 6.0e-37 158.7 222 46.4
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 7.8e-37 158.3 235 43.4
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.7e-36 157.1 244 41.8
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.7e-36 157.1 241 41.5
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.7e-36 157.1 241 41.5
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 1.7e-36 157.1 296 36.5
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.3e-36 156.8 244 41.8
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.3e-36 156.8 244 41.4
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 5.1e-36 155.6 224 42.9
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 5.1e-36 155.6 301 37.9
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 6.6e-36 155.2 211 43.6
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.5e-35 154.1 162 51.2
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.5e-35 154.1 218 42.7
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.5e-35 153.3 203 43.8
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 4.3e-35 152.5 227 42.3
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 9.6e-35 151.4 247 42.5
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.3e-34 151.0 259 38.2
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 1.6e-34 150.6 298 39.6
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.6e-34 150.6 220 43.6
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 2.1e-34 150.2 212 44.8
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 2.8e-34 149.8 238 42.0
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 6.2e-34 148.7 213 41.3
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.1e-33 147.9 266 39.5
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.4e-33 146.7 222 41.4
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 4.0e-33 146.0 229 42.8
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 6.9e-33 145.2 283 38.2
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.5e-32 144.1 212 42.5
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 2.6e-32 143.3 217 41.9
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 2.6e-32 143.3 217 44.2
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 5.8e-32 142.1 217 40.6
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 5.8e-32 142.1 217 40.1
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 7.6e-32 141.7 243 39.5
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 7.6e-32 141.7 247 40.5
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 7.6e-32 141.7 247 40.9
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.7e-31 140.6 234 38.5
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 3.8e-31 139.4 217 39.6
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 4.9e-31 139.0 219 39.3
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 4.9e-31 139.0 219 39.3
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 4.9e-31 139.0 219 39.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 6.4e-31 138.7 290 38.6
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 8.4e-31 138.3 217 39.6
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 8.4e-31 138.3 221 41.2
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.1e-30 137.9 219 39.7
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.1e-30 137.9 253 37.9
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 1.1e-30 137.9 222 37.8
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.9e-30 137.1 217 39.2
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 2.7e-29 133.3 257 37.7
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 6.0e-29 132.1 227 36.6
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 7.9e-29 131.7 212 41.5
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-27 127.9 152 42.8
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.5e-27 127.5 217 38.7
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 2.8e-26 123.2 159 42.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 6.2e-26 122.1 144 49.3
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 6.2e-26 122.1 159 48.4
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.1e-25 121.3 206 36.9
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 2.0e-24 117.1 141 45.4
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 3.4e-24 116.3 166 45.2
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 1.1e-22 111.3 220 38.6
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 3.2e-22 109.8 102 55.9
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 4.2e-22 109.4 156 45.5
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 5.6e-19 99.0 261 31.4
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 8.1e-18 95.1 223 32.7
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 1.8e-17 94.0 136 38.2
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 6.9e-17 92.0 121 43.8
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 2.2e-15 87.0 214 28.0
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 8.4e-15 85.1 171 35.1
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.3e-12 77.8 253 28.5
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 2.3e-12 77.0 191 28.3
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 7.6e-08 62.0 133 42.1
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 1.3e-07 61.2 95 40.0
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.7e-07 60.8 152 31.6
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 2.2e-07 60.5 109 43.1


User provided reference genes

Program Settings