Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 3.0e-48 194.9 100 100.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.8e-38 161.8 97 86.6
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 5.2e-37 157.5 93 87.1
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 2.0e-36 155.6 90 85.6
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 8.7e-32 140.2 92 75.0
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 1.3e-30 136.3 91 73.6
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.6e-30 136.0 94 71.3
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.6e-30 136.0 92 70.7
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 2.8e-30 135.2 98 68.4
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.6e-30 134.8 92 69.6
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.8e-30 134.4 92 71.7
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.8e-30 134.4 92 69.6
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 8.1e-30 133.7 94 70.2
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 8.1e-30 133.7 91 70.3
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 8.1e-30 133.7 95 69.5
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.8e-29 132.5 93 69.9
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.8e-29 132.5 94 69.1
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 4.0e-29 131.3 91 70.3
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.0e-29 131.3 94 68.1
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.0e-29 131.3 94 68.1
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 4.0e-29 131.3 91 71.4
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 4.0e-29 131.3 94 69.1
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 6.9e-29 130.6 91 70.3
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 6.9e-29 130.6 87 72.4
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 9.0e-29 130.2 91 69.2
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.5e-28 129.4 94 67.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 2.0e-28 129.0 92 67.4
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-28 129.0 93 68.8
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-28 129.0 93 68.8
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 2.0e-28 129.0 92 66.3
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.0e-28 129.0 94 68.1
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.4e-28 128.3 93 66.7
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.4e-28 128.3 93 66.7
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.4e-28 127.9 93 67.7
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.4e-28 127.9 91 70.3
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.8e-28 127.5 93 66.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.6e-28 127.1 93 67.7
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 9.9e-28 126.7 92 64.1
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 9.9e-28 126.7 92 66.3
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.3e-27 126.3 91 68.1
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.7e-27 125.9 87 71.3
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.7e-27 125.9 94 66.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.2e-27 125.6 88 69.3
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 2.2e-27 125.6 94 66.0
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 2.2e-27 125.6 93 66.7
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.9e-27 125.2 87 70.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 3.8e-27 124.8 99 62.6
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 3.8e-27 124.8 91 68.1
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 4.9e-27 124.4 94 62.8
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 4.9e-27 124.4 95 67.4
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 4.9e-27 124.4 94 64.9
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 6.4e-27 124.0 96 64.6
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 6.4e-27 124.0 91 68.1
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 6.4e-27 124.0 91 68.1
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.1e-26 123.2 96 62.5
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.1e-26 123.2 94 66.0
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 1.4e-26 122.9 83 73.5
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.4e-26 122.9 96 64.6
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 3.2e-26 121.7 93 61.3
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 3.2e-26 121.7 91 64.8
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 5.4e-26 120.9 93 61.3
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.1e-26 120.6 94 64.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 9.3e-26 120.2 89 65.2
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.6e-25 119.4 91 67.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 2.7e-25 118.6 98 61.2
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.7e-25 118.6 93 63.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.7e-25 118.6 93 63.4
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 2.7e-25 118.6 95 62.1
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 3.5e-25 118.2 93 61.3
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 3.5e-25 118.2 92 63.0
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 7.8e-25 117.1 91 67.0
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.3e-24 116.3 91 61.5
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 3.9e-24 114.8 94 58.5
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 6.6e-24 114.0 92 56.5
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.1e-22 109.0 92 55.4
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 6.2e-22 107.5 94 59.6
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.1e-21 106.7 95 56.8
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.4e-21 106.3 87 56.3
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 2.4e-21 105.5 93 55.9
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.4e-21 105.5 93 55.9
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.4e-21 105.5 93 55.9
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 6.9e-21 104.0 92 55.4
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 6.9e-21 104.0 92 55.4
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 9.0e-21 103.6 71 67.6
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 2.6e-20 102.1 88 59.1
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.4e-20 101.7 69 73.9
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 3.4e-20 101.7 96 54.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 7.6e-20 100.5 70 64.3
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.9e-20 100.1 72 61.1
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 9.9e-20 100.1 81 59.3
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.3e-19 99.8 91 52.7
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.3e-19 99.8 91 52.7
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.2e-19 99.0 73 68.5
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 3.8e-19 98.2 91 51.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 3.8e-19 98.2 91 51.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 3.8e-19 98.2 91 51.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 3.8e-19 98.2 91 51.6
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 3.8e-19 98.2 82 58.5
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.4e-18 96.3 91 54.9
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.2e-18 95.1 89 53.9
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.7e-17 92.0 67 62.7
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.6e-17 91.3 121 43.0
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 2.3e-16 89.0 83 51.8
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 5.6e-15 84.3 90 46.7
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.1e-13 80.1 67 64.2
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-10 69.7 93 41.9
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.6e-09 66.2 67 47.8
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.7e-09 65.5 50 62.0


User provided reference genes

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