Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 9.2e-57 223.4 118 100.0
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 5.1e-39 164.5 108 80.6
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 4.3e-38 161.4 103 82.5
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 4.0e-36 154.8 99 81.8
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 2.4e-33 145.6 103 74.8
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 2.4e-33 145.6 103 71.8
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 3.2e-33 145.2 110 73.6
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 1.2e-32 143.3 103 70.9
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 1.7e-31 139.4 107 69.2
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 1.7e-31 139.4 103 68.9
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.3e-31 139.0 102 70.6
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 3.0e-31 138.7 103 73.8
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 3.9e-31 138.3 99 74.7
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 3.9e-31 138.3 108 67.6
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 5.1e-31 137.9 99 72.7
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 5.1e-31 137.9 103 70.9
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.1e-30 136.7 101 69.3
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 1.5e-30 136.3 99 72.7
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.9e-30 136.0 104 70.2
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.9e-30 136.0 102 70.6
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 3.3e-30 135.2 107 67.3
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 3.3e-30 135.2 102 72.5
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 4.3e-30 134.8 100 69.0
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 7.3e-30 134.0 111 60.4
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 9.6e-30 133.7 107 66.4
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 9.6e-30 133.7 107 66.4
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 9.6e-30 133.7 107 71.0
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.1e-29 132.5 107 70.1
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 2.1e-29 132.5 97 71.1
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 2.1e-29 132.5 101 68.3
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 3.6e-29 131.7 104 66.3
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 3.6e-29 131.7 107 70.1
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.6e-29 131.7 101 70.3
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.6e-29 131.7 101 70.3
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 4.7e-29 131.3 103 69.9
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 6.2e-29 131.0 101 66.3
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.2e-29 131.0 107 68.2
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 6.2e-29 131.0 102 65.7
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 8.1e-29 130.6 101 66.3
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 8.1e-29 130.6 101 69.3
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 1.1e-28 130.2 105 66.7
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 1.4e-28 129.8 105 65.7
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 1.4e-28 129.8 105 65.7
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 1.4e-28 129.8 103 68.0
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.8e-28 129.4 101 65.3
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 1.8e-28 129.4 109 63.3
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 2.4e-28 129.0 103 62.1
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 3.1e-28 128.6 104 65.4
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 6.9e-28 127.5 99 66.7
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.2e-27 126.7 100 69.0
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.2e-27 126.7 102 65.7
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.2e-27 126.7 100 68.0
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 9.9e-27 123.6 102 65.7
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 9.9e-27 123.6 102 66.7
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 9.9e-27 123.6 103 64.1
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.3e-26 123.2 101 67.3
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.7e-26 122.9 102 64.7
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.9e-26 122.1 101 67.3
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 2.9e-26 122.1 102 63.7
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 4.9e-26 121.3 102 62.7
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 4.9e-26 121.3 102 64.7
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 4.9e-26 121.3 102 65.7
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 4.9e-26 121.3 102 63.7
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 6.4e-26 120.9 102 61.8
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 8.4e-26 120.6 106 66.0
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 8.4e-26 120.6 102 63.7
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 8.4e-26 120.6 102 63.7
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.4e-25 119.8 102 61.8
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.4e-25 119.8 101 65.3
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 1.4e-25 119.8 102 62.7
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 2.4e-25 119.0 102 62.7
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 3.2e-25 118.6 105 60.0
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 4.2e-25 118.2 102 62.7
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 4.2e-25 118.2 102 62.7
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 9.3e-25 117.1 95 64.2
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 9.3e-25 117.1 124 58.9
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 2.1e-24 115.9 102 62.7
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 7.8e-24 114.0 104 58.7
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 3.0e-23 112.1 98 62.2
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 8.7e-23 110.5 105 59.0
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 1.9e-22 109.4 100 62.0
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 3.3e-22 108.6 64 89.1
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 4.3e-22 108.2 81 71.6
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 7.3e-22 107.5 64 89.1
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 7.3e-22 107.5 81 74.1
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.3e-21 106.7 81 70.4
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 1.3e-21 106.7 89 62.9
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 2.8e-21 105.5 63 85.7
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 4.8e-21 104.8 114 53.5
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 1.1e-20 103.6 105 55.2
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 6.9e-20 100.9 60 85.0
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 9.0e-20 100.5 106 57.5
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 4.5e-19 98.2 101 54.5
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 5.8e-19 97.8 107 51.4
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 5.8e-19 97.8 61 82.0
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.7e-18 96.3 63 77.8
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.1e-17 93.6 53 96.2
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 9.3e-17 90.5 105 50.5
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.6e-16 89.7 53 88.7
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.1e-16 89.4 60 76.7
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 7.9e-16 87.4 52 86.5
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.0e-15 87.0 50 90.0
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.8e-15 86.3 54 81.5
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 8.7e-15 84.0 50 82.0
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.3e-14 82.0 53 77.4
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 2.8e-13 79.0 69 53.6
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.4e-10 67.4 39 87.2
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 8.7e-07 57.4 64 46.9


User provided reference genes

Program Settings