Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 4.9e-249 864.0 436 100.0
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 6.2e-143 511.5 334 80.8
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 3.1e-142 509.2 331 79.2
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 6.5e-132 474.9 329 70.2
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 5.5e-131 471.9 331 70.4
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 2.1e-130 469.9 342 67.5
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.3e-128 462.6 331 69.2
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.7e-128 461.8 331 68.9
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 7.4e-128 461.5 328 69.8
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 2.1e-122 443.4 331 67.7
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 3.6e-122 442.6 329 68.1
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.7e-119 432.6 330 65.5
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 6.3e-119 431.8 330 64.8
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 6.3e-119 431.8 330 65.8
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.4e-118 430.6 330 65.5
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 1.5e-117 427.2 330 66.1
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 4.5e-117 425.6 330 64.8
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 3.8e-116 422.5 330 64.8
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 8.5e-116 421.4 330 63.3
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.9e-115 420.2 334 63.8
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 9.4e-115 417.9 333 63.1
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 2.7e-114 416.4 357 58.8
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 4.7e-114 415.6 331 61.9
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 7.9e-114 414.8 331 65.3
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.0e-113 414.5 332 62.3
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 6.7e-113 411.8 329 63.2
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 2.6e-112 409.8 329 63.8
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.8e-111 406.4 331 61.3
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 3.7e-111 406.0 336 61.9
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 3.7e-111 406.0 331 61.3
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 4.8e-111 405.6 331 61.0
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.8e-111 405.6 331 61.0
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.1e-110 404.4 331 61.3
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.1e-110 404.4 330 60.9
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.2e-109 401.0 333 60.1
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.2e-109 401.0 333 60.1
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 5.9e-109 398.7 330 61.5
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 7.7e-109 398.3 287 68.6
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 1.0e-108 397.9 331 61.6
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.5e-107 394.0 330 60.6
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.5e-107 394.0 346 58.4
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 1.5e-107 394.0 331 62.2
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 4.2e-107 392.5 330 60.3
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 4.2e-107 392.5 332 60.2
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 7.2e-107 391.7 329 60.8
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 3.6e-106 389.4 331 61.9
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 1.8e-105 387.1 330 59.1
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 1.8e-105 387.1 330 60.3
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.3e-105 386.7 350 59.7
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 3.0e-105 386.3 330 60.0
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.0e-105 386.3 332 58.1
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 5.2e-105 385.6 335 57.0
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 2.0e-104 383.6 332 61.1
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 2.6e-104 383.3 330 60.9
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 2.6e-104 383.3 332 59.0
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 3.3e-104 382.9 332 58.7
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 7.4e-104 381.7 330 59.1
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 9.7e-104 381.3 329 62.0
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 6.3e-103 378.6 330 58.5
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 8.2e-103 378.3 330 58.5
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.4e-102 377.5 331 57.7
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.1e-102 376.3 329 60.8
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 4.1e-102 375.9 335 58.8
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.6e-101 373.2 332 58.4
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 7.7e-101 371.7 330 57.6
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 2.2e-100 370.2 328 54.9
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.6e-98 364.0 329 57.4
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 3.6e-98 362.8 329 55.9
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 8.0e-98 361.7 331 56.8
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 8.0e-98 361.7 280 66.4
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 1.0e-97 361.3 368 52.2
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.2e-96 357.8 329 56.5
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 2.0e-96 357.1 354 52.3
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 2.6e-96 356.7 371 50.9
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 2.6e-96 356.7 330 55.8
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 4.4e-96 355.9 333 54.7
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 2.2e-95 353.6 328 55.8
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 2.8e-95 353.2 330 54.8
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 2.8e-95 353.2 331 53.8
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 8.3e-95 351.7 282 59.6
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 7.0e-94 348.6 347 53.3
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 9.1e-94 348.2 331 53.5
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.2e-93 347.8 333 53.5
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 2.0e-93 347.1 331 52.6
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 4.5e-93 345.9 333 53.8
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 5.9e-93 345.5 330 53.3
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.0e-92 344.7 296 59.5
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.7e-92 344.0 334 53.6
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 1.7e-92 344.0 330 54.5
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.2e-92 343.6 333 53.5
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 6.5e-92 342.0 331 53.2
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 6.5e-92 342.0 291 58.4
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 6.5e-92 342.0 344 53.5
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 1.5e-91 340.9 334 54.2
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 3.2e-91 339.7 319 56.1
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 4.2e-91 339.3 334 52.7
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 7.2e-91 338.6 333 53.2
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 1.6e-90 337.4 448 43.3
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 2.1e-90 337.0 330 53.3
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 6.1e-90 335.5 333 52.9
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 6.1e-90 335.5 330 53.3
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 6.1e-90 335.5 339 53.4
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.0e-89 334.7 278 63.3
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 1.4e-89 334.3 332 51.2
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 8.8e-89 331.6 333 51.4
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 1.2e-88 331.3 300 57.3
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.0e-88 330.5 538 40.5
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 2.6e-88 330.1 332 52.1
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 4.4e-88 329.3 367 48.0
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 5.7e-88 328.9 333 51.1
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 7.5e-88 328.6 330 52.1
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 9.8e-88 328.2 334 53.3
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.7e-87 327.4 329 51.4
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 3.7e-87 326.2 330 51.5
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 6.3e-87 325.5 329 51.4
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 6.3e-87 325.5 369 48.5
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 1.4e-86 324.3 329 51.7
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 1.4e-86 324.3 470 40.9
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.2e-85 321.2 332 50.6
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 2.0e-85 320.5 329 51.1
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 5.9e-85 318.9 340 50.0
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 9.5e-83 311.6 330 52.1
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 2.8e-82 310.1 338 48.5
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 9.8e-80 301.6 302 50.3
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 2.2e-79 300.4 334 48.5
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 3.7e-79 299.7 334 46.7
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.3e-79 298.5 210 71.9
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 3.5e-77 293.1 278 57.2
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 3.3e-75 286.6 441 39.9
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 7.5e-72 275.4 276 52.9
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 6.4e-71 272.3 208 64.4
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 4.6e-69 266.2 276 51.4
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 2.5e-67 260.4 213 59.6
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 3.3e-67 260.0 208 60.6
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.3e-65 253.8 161 75.8
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.3e-65 253.8 209 64.1
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.2e-63 247.3 160 74.4
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.4e-62 244.6 277 50.2
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 2.7e-61 240.4 160 71.9
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 5.6e-59 232.6 283 43.8
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.5e-59 231.9 187 65.8
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.7e-58 229.6 167 66.5
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 8.1e-58 228.8 277 47.3
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.1e-57 228.4 160 70.6
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.4e-57 228.0 160 70.6
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.3e-57 227.3 160 70.0
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.0e-57 226.5 167 65.9
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 9.9e-56 221.9 160 69.4
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 3.5e-53 213.4 276 45.3
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 8.6e-52 208.8 338 36.7
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 7.3e-51 205.7 340 37.4
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 9.6e-51 205.3 160 65.6
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.6e-50 204.5 155 65.8
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.2e-48 198.4 306 40.2
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.5e-48 198.0 337 36.8
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 2.0e-48 197.6 165 58.8
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.7e-47 194.5 378 37.0
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.1e-44 183.0 151 65.6
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.6e-43 178.7 107 82.2
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 2.4e-41 174.1 123 67.5
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 9.0e-41 172.2 337 33.5
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 7.6e-40 169.1 126 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 9.9e-40 168.7 344 32.6
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 9.9e-40 168.7 340 33.5
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 2.7e-37 160.6 167 48.5
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 7.9e-37 159.1 256 39.5
ECA240G4334 Erigeron canadensis HOM05D002493 ORTHO05D004761 1.5e-35 154.8 102 79.4
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.7e-31 141.4 127 56.7
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.2e-29 135.2 121 53.7
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 6.0e-29 132.9 138 44.9
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 1.3e-28 131.7 149 49.0
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 2.9e-23 114.0 139 45.3
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 1.0e-20 105.5 100 54.0
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 1.0e-20 105.5 100 53.0
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.3e-20 104.4 98 52.0
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 8.4e-15 85.9 249 27.7
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 8.7e-12 75.9 229 30.6
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 2.9e-07 60.8 383 20.9


User provided reference genes

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