Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.8e-176 622.5 317 100.0
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 4.0e-131 471.9 325 76.9
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 3.7e-129 465.3 332 74.1
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 8.6e-126 454.1 326 72.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.1e-124 449.5 331 70.7
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.8e-124 449.1 341 68.3
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 8.0e-124 447.6 339 68.4
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 3.1e-123 445.7 323 69.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.4e-122 442.2 330 70.0
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 5.8e-122 441.4 315 72.1
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 5.8e-122 441.4 323 70.9
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 7.5e-122 441.0 339 67.3
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.7e-121 439.9 321 71.3
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 2.9e-121 439.1 274 76.6
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.1e-120 437.2 335 68.1
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.1e-120 437.2 332 67.2
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 1.4e-120 436.8 335 67.5
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.9e-120 436.4 328 69.5
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 3.2e-120 435.6 327 69.1
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 7.0e-120 434.5 317 71.3
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 7.0e-120 434.5 337 67.7
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.6e-119 433.3 323 67.5
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.0e-119 433.0 325 68.9
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 4.6e-119 431.8 324 69.1
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.6e-119 431.8 335 66.6
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 6.0e-119 431.4 312 69.9
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.0e-119 431.4 333 66.7
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.8e-119 431.0 335 66.9
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.3e-118 430.3 317 68.5
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.3e-118 430.3 316 69.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.7e-118 429.9 334 67.1
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 3.0e-118 429.1 330 65.8
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 3.9e-118 428.7 317 69.1
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.9e-118 428.7 330 66.4
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 3.9e-118 428.7 336 66.4
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 5.0e-118 428.3 302 69.2
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 5.0e-118 428.3 327 69.1
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 5.0e-118 428.3 327 69.1
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 5.0e-118 428.3 323 66.9
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 8.6e-118 427.6 328 68.3
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.5e-117 426.8 304 71.4
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.5e-117 426.8 334 66.5
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.9e-117 426.4 334 66.8
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 2.5e-117 426.0 307 71.7
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 4.3e-117 425.2 266 77.1
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 4.3e-117 425.2 266 77.1
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 4.3e-117 425.2 323 67.2
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 5.6e-117 424.9 319 69.3
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 7.3e-117 424.5 332 66.9
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 7.3e-117 424.5 331 67.4
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 9.5e-117 424.1 324 67.6
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.6e-116 423.3 324 66.0
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 1.6e-116 423.3 328 66.8
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.8e-116 422.5 310 70.0
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 4.7e-116 421.8 332 65.4
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 4.7e-116 421.8 299 71.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 1.1e-115 420.6 347 63.4
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.4e-115 420.2 328 66.5
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.4e-115 420.2 318 67.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.0e-115 418.7 250 81.2
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 8.9e-115 417.5 322 68.6
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.2e-114 417.2 367 61.9
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.5e-114 416.8 319 67.7
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 2.0e-114 416.4 310 69.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.4e-114 415.6 343 64.7
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 4.4e-114 415.2 252 77.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 5.8e-114 414.8 319 66.5
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.7e-113 413.3 250 80.0
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.2e-113 412.9 250 79.2
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 3.7e-113 412.1 324 64.2
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 6.4e-113 411.4 291 69.8
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 6.4e-113 411.4 291 69.8
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.4e-112 410.2 305 68.9
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 2.4e-112 409.5 313 66.5
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 2.4e-112 409.5 320 67.5
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 7.1e-112 407.9 291 69.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 7.1e-112 407.9 291 69.1
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 7.1e-112 407.9 312 69.2
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 1.2e-111 407.1 318 66.0
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 1.6e-111 406.8 324 63.3
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.5e-111 405.6 305 67.5
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 4.6e-111 405.2 283 70.7
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 6.0e-111 404.8 300 68.3
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.7e-110 403.3 272 72.1
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 5.1e-110 401.7 292 69.2
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.5e-109 400.2 310 67.1
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.9e-109 399.8 288 70.1
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.3e-109 399.1 293 69.3
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 5.6e-109 398.3 314 65.3
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.1e-108 396.4 251 75.7
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.1e-107 392.5 269 70.6
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.1e-107 392.5 328 62.8
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.2e-106 390.6 266 71.4
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 4.4e-106 388.7 280 69.3
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.4e-106 388.7 274 69.7
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.4e-104 382.9 405 51.9
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.2e-103 380.6 318 61.9
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.1e-103 379.8 316 62.0
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 2.7e-103 379.4 298 64.1
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.0e-102 377.5 252 72.2
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 5.6e-101 371.7 300 64.7
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 9.6e-101 370.9 251 71.3
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 2.4e-99 366.3 283 67.8
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 6.9e-99 364.8 297 64.6
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 3.2e-96 355.9 240 72.1
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 7.1e-96 354.8 319 57.4
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 1.0e-94 350.9 325 58.5
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.1e-92 343.2 347 56.8
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.8e-86 323.6 290 56.9
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 2.5e-85 319.7 326 52.8
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.7e-79 299.7 232 66.8
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.3e-76 290.8 298 55.4
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 4.8e-76 288.9 330 52.1
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.3e-61 239.6 217 59.4
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.4e-61 238.4 203 61.1
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 6.3e-60 235.3 150 75.3
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 2.4e-59 233.4 243 48.1
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 9.1e-59 231.5 247 49.4
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.7e-58 228.4 207 60.4
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 9.4e-56 221.5 236 49.6
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.6e-55 219.2 190 64.2
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.0e-54 216.5 127 84.3
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.0e-54 216.5 127 84.3
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 2.4e-51 206.8 127 75.6
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 9.1e-51 204.9 170 62.9
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.9e-49 199.9 203 54.2
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 3.8e-49 199.5 247 41.3
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 3.6e-47 193.0 247 42.1
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.8e-46 190.7 109 83.5
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.2e-42 177.9 236 39.8
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.8e-35 154.1 248 35.9
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.1e-35 153.3 91 81.3
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 7.7e-34 148.7 100 71.0
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 5.9e-26 122.5 215 33.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 2.3e-25 120.6 136 57.4
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.0e-25 119.4 89 67.4
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 6.5e-25 119.0 108 61.1
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.4e-21 106.7 66 77.3
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 2.8e-20 103.6 65 75.4
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 4.9e-20 102.8 89 59.6
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 4.9e-20 102.8 89 59.6
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 4.9e-20 102.8 89 59.6
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 6.3e-20 102.4 65 75.4
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 2.7e-18 97.1 85 60.0
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 8.6e-17 92.0 154 36.4
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 4.3e-16 89.7 53 79.2
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 7.3e-16 89.0 83 60.2
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.3e-14 84.0 60 68.3
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 3.0e-14 83.6 50 78.0
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.2e-13 81.6 48 79.2
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.9e-12 76.3 150 37.3
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.5e-08 63.9 47 61.7
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 8.9e-06 55.5 94 41.5


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