Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 3.9e-73 278.5 191 100.0
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.3e-49 200.3 190 66.8
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 1.0e-36 157.5 115 67.0
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 1.2e-34 150.6 115 66.1
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.7e-34 149.4 111 64.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 1.0e-33 147.5 114 63.2
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 5.1e-33 145.2 115 60.0
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 6.7e-33 144.8 115 62.6
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 6.7e-33 144.8 76 77.6
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 8.8e-33 144.4 70 87.1
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.0e-32 143.3 104 70.2
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 2.0e-32 143.3 115 63.5
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 5.7e-32 141.7 76 81.6
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 5.7e-32 141.7 96 68.8
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 7.4e-32 141.4 103 67.0
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.3e-31 140.6 72 83.3
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 2.2e-31 139.8 92 66.3
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 2.2e-31 139.8 113 62.8
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 2.2e-31 139.8 109 59.6
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 2.8e-31 139.4 99 66.7
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 3.7e-31 139.0 91 69.2
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 6.3e-31 138.3 86 74.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 8.2e-31 137.9 76 76.3
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.1e-30 137.5 107 62.6
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.4e-30 137.1 105 63.8
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.8e-30 136.7 101 64.4
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 1.8e-30 136.7 114 60.5
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.4e-30 136.3 78 75.6
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 4.1e-30 135.6 104 67.3
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 5.3e-30 135.2 108 60.2
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 6.9e-30 134.8 70 82.9
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 6.9e-30 134.8 70 78.6
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 6.9e-30 134.8 75 77.3
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 9.1e-30 134.4 109 61.5
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 9.1e-30 134.4 103 66.0
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 9.1e-30 134.4 100 63.0
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.2e-29 134.0 68 82.4
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.2e-29 134.0 97 68.0
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 1.5e-29 133.7 62 90.3
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 2.0e-29 133.3 93 67.7
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 2.6e-29 132.9 100 65.0
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 2.6e-29 132.9 65 84.6
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 2.6e-29 132.9 191 54.5
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 2.6e-29 132.9 94 66.0
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 4.5e-29 132.1 79 70.9
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 4.5e-29 132.1 92 69.6
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 4.5e-29 132.1 105 61.0
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 5.9e-29 131.7 87 67.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 5.9e-29 131.7 68 82.4
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 5.9e-29 131.7 72 81.9
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 7.7e-29 131.3 62 87.1
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 1.3e-28 130.6 92 69.6
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 1.3e-28 130.6 64 84.4
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 1.7e-28 130.2 82 68.3
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 2.2e-28 129.8 98 63.3
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 2.9e-28 129.4 111 59.5
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 2.9e-28 129.4 92 69.6
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 3.8e-28 129.0 73 78.1
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.0e-28 128.6 69 76.8
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 5.0e-28 128.6 77 76.6
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 5.0e-28 128.6 101 64.4
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 8.5e-28 127.9 89 70.8
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.1e-27 127.5 94 67.0
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.1e-27 127.5 75 76.0
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.1e-27 127.5 103 62.1
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.4e-27 127.1 77 74.0
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.9e-27 126.7 104 60.6
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.9e-27 126.7 63 82.5
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.9e-27 126.7 69 76.8
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.9e-27 126.7 69 76.8
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.9e-27 126.7 69 76.8
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.9e-27 126.7 72 76.4
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 3.2e-27 125.9 92 66.3
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 3.2e-27 125.9 106 59.4
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 4.2e-27 125.6 66 78.8
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 4.2e-27 125.6 103 61.2
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 7.2e-27 124.8 67 79.1
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.2e-26 124.0 64 82.8
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.2e-26 124.0 99 62.6
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.2e-26 124.0 99 62.6
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 1.6e-26 123.6 95 63.2
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 4.7e-26 122.1 79 73.4
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.0e-25 120.9 97 60.8
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.0e-25 120.9 73 76.7
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.0e-25 120.9 73 76.7
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.4e-25 120.6 72 70.8
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 1.8e-25 120.2 83 67.5
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.8e-25 120.2 79 69.6
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 1.8e-25 120.2 78 70.5
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.3e-25 119.8 79 69.6
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.0e-25 119.4 73 75.3
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 3.0e-25 119.4 79 69.6
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 3.0e-25 119.4 79 69.6
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 3.0e-25 119.4 79 69.6
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 3.9e-25 119.0 99 57.6
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 5.2e-25 118.6 80 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 2.0e-24 116.7 65 73.8
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 2.0e-24 116.7 79 67.1
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 3.3e-24 115.9 66 72.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.3e-24 115.9 61 78.7
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 7.4e-24 114.8 73 74.0
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 4.8e-23 112.1 62 72.6
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 1.6e-21 107.1 72 62.5
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 2.0e-21 106.7 63 71.4
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 6.3e-15 85.1 62 56.5
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 5.9e-13 78.6 68 50.0
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 5.7e-08 62.0 60 43.3


User provided reference genes

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