Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 2.9e-98 362.1 206 100.0
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.3e-71 272.7 206 71.8
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 1.3e-66 256.9 205 67.8
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.4e-52 210.3 215 57.2
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 7.0e-52 208.0 206 58.7
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.0e-50 204.1 206 56.8
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 6.5e-50 201.4 203 57.6
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 1.9e-49 199.9 216 52.8
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 5.5e-49 198.4 209 55.5
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 9.4e-49 197.6 211 52.6
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.1e-48 196.4 206 54.9
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 4.7e-48 195.3 213 54.9
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 8.0e-48 194.5 211 51.2
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 8.0e-48 194.5 208 52.9
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.4e-47 193.7 200 53.5
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 2.3e-47 193.0 200 59.5
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 2.3e-47 193.0 227 53.3
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 2.3e-47 193.0 197 54.3
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 2.3e-47 193.0 205 53.2
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 4.0e-47 192.2 199 57.3
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 6.7e-47 191.4 208 55.3
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 8.8e-47 191.0 208 51.9
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.2e-46 190.7 194 56.7
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 7.5e-46 188.0 206 51.0
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.3e-45 187.2 202 51.5
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.3e-45 187.2 206 51.9
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 4.8e-45 185.3 223 51.1
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 4.8e-45 185.3 198 57.6
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 6.3e-45 184.9 210 51.0
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 1.4e-44 183.7 202 52.5
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 1.4e-44 183.7 212 59.4
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.4e-44 183.7 202 52.0
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.8e-44 183.3 210 50.0
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.8e-44 183.3 210 50.0
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.8e-44 183.3 205 50.7
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.4e-44 183.0 224 48.7
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 2.4e-44 183.0 223 50.2
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 3.1e-44 182.6 200 58.5
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 5.3e-44 181.8 204 51.0
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 7.0e-44 181.4 200 51.0
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 7.0e-44 181.4 223 50.2
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 1.2e-43 180.6 227 47.1
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.6e-43 180.3 198 56.6
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.6e-43 180.3 210 51.9
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 2.0e-43 179.9 205 49.8
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 2.0e-43 179.9 197 56.3
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 2.7e-43 179.5 198 55.6
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.7e-43 179.5 197 53.8
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 2.7e-43 179.5 204 51.5
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 3.5e-43 179.1 204 50.0
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 4.5e-43 178.7 213 50.2
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.0e-42 177.6 202 51.5
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 1.7e-42 176.8 202 48.5
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 2.2e-42 176.4 223 48.9
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 5.0e-42 175.3 210 49.5
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 8.5e-42 174.5 223 45.7
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.5e-41 173.7 194 53.6
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 1.9e-41 173.3 151 60.9
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.9e-41 173.3 219 48.4
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 3.2e-41 172.6 206 50.5
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 7.2e-41 171.4 212 50.0
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 2.1e-40 169.9 303 39.6
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 6.1e-40 168.3 141 62.4
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 1.4e-39 167.2 201 51.2
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.4e-39 167.2 211 50.2
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.8e-39 166.8 192 48.4
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 6.8e-39 164.9 214 44.4
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 8.8e-39 164.5 214 44.9
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 8.8e-39 164.5 214 46.3
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 2.0e-38 163.3 148 57.4
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 3.4e-38 162.5 201 45.8
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 5.7e-38 161.8 201 46.3
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 8.3e-37 157.9 245 43.7
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 4.1e-36 155.6 151 55.0
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 4.1e-36 155.6 203 45.8
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 7.0e-36 154.8 212 45.3
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.6e-35 153.7 150 56.7
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 3.5e-35 152.5 158 53.8
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 2.9e-34 149.4 202 44.6
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 3.8e-34 149.1 201 42.8
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 8.6e-34 147.9 213 45.1
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 1.2e-32 144.1 201 42.3
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 1.6e-32 143.7 191 40.8
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 2.1e-32 143.3 201 40.8
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 3.6e-32 142.5 108 68.5
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 6.8e-31 138.3 203 40.9
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 8.9e-31 137.9 201 40.3
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 1.2e-27 127.5 202 39.1
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 2.9e-26 122.9 145 56.6
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 3.8e-26 122.5 203 38.9
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 4.3e-25 119.0 158 42.4
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 4.3e-25 119.0 158 42.4
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 9.5e-25 117.9 188 44.1
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.2e-24 117.5 92 68.5
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 2.2e-21 106.7 147 47.6
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 4.3e-17 92.4 184 38.6
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 1.1e-15 87.8 170 35.9
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 2.3e-15 86.7 163 35.6
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 2.0e-14 83.6 134 43.3
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.4e-12 76.6 72 56.9
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 4.1e-12 75.9 127 42.5
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 1.6e-11 73.9 189 32.8
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 5.6e-09 65.5 162 30.2
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 1.6e-08 63.9 160 29.4
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 2.0e-06 57.0 132 31.1
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.4e-06 56.2 54 53.7


User provided reference genes

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