Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 4.2e-99 364.8 194 100.0
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 4.4e-64 248.4 196 68.4
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 3.7e-63 245.4 191 70.2
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 4.7e-42 175.3 185 55.7
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.4e-41 173.7 186 54.3
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.7e-39 165.6 203 50.2
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 4.1e-38 162.2 188 53.2
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 3.5e-37 159.1 177 49.7
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 4.6e-37 158.7 173 55.5
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 3.0e-36 156.0 189 51.3
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.5e-35 153.7 181 51.4
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.9e-35 153.3 194 49.0
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.9e-35 153.3 140 58.6
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 3.3e-35 152.5 183 51.9
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 9.5e-35 151.0 123 61.8
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 4.7e-34 148.7 139 56.8
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 6.2e-34 148.3 200 46.0
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.1e-33 147.5 175 50.9
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 1.1e-33 147.5 188 47.3
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 8.9e-33 144.4 214 45.3
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 2.0e-32 143.3 136 55.1
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.0e-32 143.3 136 55.1
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.0e-32 143.3 136 55.1
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 2.6e-32 142.9 120 59.2
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 2.6e-32 142.9 137 54.7
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 4.4e-32 142.1 166 48.8
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 3.7e-31 139.0 127 54.3
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 8.3e-31 137.9 202 43.1
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 1.1e-30 137.5 179 45.3
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.4e-30 137.1 136 50.7
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 2.4e-30 136.3 206 44.7
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 2.4e-30 136.3 136 52.9
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.4e-30 136.3 136 52.9
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 5.4e-30 135.2 200 43.5
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 7.1e-30 134.8 178 44.4
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.2e-29 134.0 136 49.3
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.6e-29 133.7 127 52.8
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.1e-29 133.3 121 52.9
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 2.1e-29 133.3 196 44.4
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 2.7e-29 132.9 223 42.2
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 3.5e-29 132.5 195 43.6
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.6e-29 132.1 193 45.1
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 6.0e-29 131.7 188 46.8
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 6.0e-29 131.7 188 46.8
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 1.0e-28 131.0 203 41.4
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 1.0e-28 131.0 195 43.1
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 1.3e-28 130.6 204 42.6
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.3e-28 130.6 194 41.8
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 3.0e-28 129.4 155 45.2
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 5.1e-28 128.6 170 44.1
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 6.6e-28 128.3 165 45.5
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.1e-27 127.5 158 44.9
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 1.1e-27 127.5 194 42.8
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.3e-27 125.9 175 47.4
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 5.6e-27 125.2 122 55.7
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 5.6e-27 125.2 120 54.2
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 5.6e-27 125.2 158 47.5
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 5.6e-27 125.2 195 42.6
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 9.5e-27 124.4 187 47.1
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 9.5e-27 124.4 197 41.6
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 9.5e-27 124.4 208 42.8
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.2e-26 124.0 155 41.9
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 1.6e-26 123.6 182 44.5
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 2.8e-26 122.9 138 44.9
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 3.6e-26 122.5 195 41.5
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 4.7e-26 122.1 188 38.3
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 4.7e-26 122.1 196 38.3
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 4.0e-25 119.0 153 51.6
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 5.2e-25 118.6 195 41.0
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 1.7e-23 113.6 191 38.7
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 1.7e-23 113.6 201 39.8
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 2.9e-23 112.8 193 42.0
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 9.2e-22 107.8 176 41.5
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 9.2e-22 107.8 194 41.2
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 9.2e-22 107.8 154 49.4
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 4.6e-21 105.5 118 46.6
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 6.0e-21 105.1 93 60.2
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-20 104.0 116 50.0
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 1.7e-20 103.6 133 45.1
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 8.6e-20 101.3 177 39.5
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 1.9e-19 100.1 127 44.1
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 4.3e-19 99.0 180 41.7
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 9.6e-19 97.8 165 41.2
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 8.1e-18 94.7 138 42.8
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.1e-17 94.4 137 46.0
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 1.2e-16 90.9 106 51.9
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 1.5e-16 90.5 76 55.3
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 5.8e-16 88.6 74 54.1
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.7e-15 87.0 77 54.5
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 2.2e-15 86.7 141 44.0
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 2.2e-15 86.7 112 41.1
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 1.4e-14 84.0 76 51.3
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 7.3e-11 71.6 57 57.9
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.8e-10 69.7 57 56.1
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 3.1e-09 66.2 141 26.2
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 1.2e-08 64.3 57 50.9
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.2e-08 64.3 107 43.9
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.5e-08 63.9 51 62.7
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 3.4e-08 62.8 77 48.1
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 8.4e-07 58.2 164 34.8
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.4e-06 57.4 49 55.1
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.4e-06 57.4 49 55.1
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 1.4e-06 57.4 49 51.0


User provided reference genes

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