Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 1.5e-85 319.7 190 100.0
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 9.5e-80 300.4 188 85.1
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 1.5e-77 293.1 189 82.5
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 6.6e-73 277.7 158 88.0
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 3.3e-72 275.4 158 88.6
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 9.5e-72 273.9 187 77.0
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 2.8e-71 272.3 158 86.7
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 6.2e-71 271.2 158 85.4
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 6.2e-71 271.2 158 86.7
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 6.2e-71 271.2 158 87.3
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 8.1e-71 270.8 158 86.7
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 1.8e-70 269.6 158 84.8
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 1.8e-70 269.6 187 76.5
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 2.3e-70 269.2 158 86.1
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 2.3e-70 269.2 187 76.5
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 3.1e-70 268.9 158 84.8
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 4.0e-70 268.5 158 86.1
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 5.2e-70 268.1 158 85.4
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 5.2e-70 268.1 158 86.1
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 5.2e-70 268.1 154 86.4
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 6.8e-70 267.7 158 84.8
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 6.8e-70 267.7 156 86.5
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 8.9e-70 267.3 158 84.8
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 8.9e-70 267.3 157 84.1
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 1.2e-69 266.9 155 85.8
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 1.2e-69 266.9 156 86.5
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.5e-69 266.5 158 84.8
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.5e-69 266.5 158 85.4
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 1.5e-69 266.5 158 85.4
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 1.5e-69 266.5 158 84.8
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.0e-69 266.2 158 84.2
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 2.0e-69 266.2 158 85.4
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.6e-69 265.8 158 84.2
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 3.4e-69 265.4 158 84.2
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.4e-69 265.4 153 86.9
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 5.8e-69 264.6 157 82.8
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 9.9e-69 263.8 158 83.5
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 9.9e-69 263.8 158 84.8
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 9.9e-69 263.8 158 84.8
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 9.9e-69 263.8 158 84.8
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 1.3e-68 263.5 152 86.8
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 1.3e-68 263.5 186 75.3
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.7e-68 263.1 188 73.9
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.7e-68 263.1 158 84.8
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 2.2e-68 262.7 156 83.3
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.7e-68 261.9 152 86.2
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 3.7e-68 261.9 156 84.6
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 1.1e-67 260.4 156 83.3
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 1.1e-67 260.4 171 79.5
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 1.9e-67 259.6 156 83.3
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 2.4e-67 259.2 156 84.0
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.4e-67 259.2 156 84.0
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 3.2e-67 258.8 156 82.7
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 4.1e-67 258.5 158 83.5
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 4.1e-67 258.5 157 83.4
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 4.1e-67 258.5 158 81.0
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 4.1e-67 258.5 158 81.0
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 7.1e-67 257.7 159 83.0
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 9.2e-67 257.3 156 83.3
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 2.7e-66 255.8 158 80.4
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 2.7e-66 255.8 158 81.6
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 3.5e-66 255.4 156 81.4
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 4.6e-66 255.0 186 70.4
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 4.6e-66 255.0 156 84.0
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 7.8e-66 254.2 158 81.0
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 3.0e-65 252.3 157 80.3
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 3.9e-65 251.9 158 79.7
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 5.1e-65 251.5 158 79.1
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 6.6e-65 251.1 188 68.1
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 6.6e-65 251.1 156 80.1
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 1.9e-64 249.6 158 79.1
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 1.9e-64 249.6 158 79.1
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 2.5e-64 249.2 153 84.3
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 3.3e-64 248.8 155 80.0
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 4.3e-64 248.4 156 79.5
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 4.3e-64 248.4 156 79.5
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 4.3e-64 248.4 158 78.5
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 7.3e-64 247.7 158 79.1
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 9.6e-64 247.3 156 78.8
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 2.1e-63 246.1 158 78.5
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 2.1e-63 246.1 158 75.9
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 4.7e-63 245.0 158 78.5
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 8.1e-63 244.2 158 77.2
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 1.4e-62 243.4 186 68.8
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 4.0e-62 241.9 158 75.3
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 4.0e-62 241.9 156 80.1
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 5.2e-62 241.5 186 68.3
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 8.9e-62 240.7 158 75.3
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 1.5e-61 240.0 158 75.3
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 1.5e-61 240.0 187 66.3
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 2.0e-61 239.6 158 76.6
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 2.0e-61 239.6 156 76.9
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.6e-61 239.2 158 74.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 5.8e-61 238.0 158 74.1
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 9.9e-61 237.3 159 78.0
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 3.8e-60 235.3 134 87.3
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 4.9e-60 235.0 156 74.4
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 4.9e-60 235.0 156 75.6
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 4.9e-60 235.0 158 77.2
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 4.9e-60 235.0 156 78.8
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 6.4e-60 234.6 185 67.6
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 8.4e-60 234.2 159 76.1
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 8.4e-60 234.2 185 67.0
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 8.4e-60 234.2 186 66.1
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 1.4e-59 233.4 186 67.2
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 2.4e-59 232.6 159 74.8
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 1.2e-58 230.3 156 75.6
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 1.2e-58 230.3 156 75.0
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 3.5e-58 228.8 186 65.1
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 1.3e-57 226.9 168 69.6
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 1.3e-57 226.9 186 66.7
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 1.3e-57 226.9 157 73.9
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 3.0e-57 225.7 156 72.4
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 3.9e-57 225.3 158 70.9
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 1.1e-56 223.8 133 82.7
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 1.6e-55 219.9 152 71.7
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 1.1e-54 217.2 188 64.4
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 1.8e-54 216.5 156 69.2
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.5e-53 213.4 146 71.2
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 4.4e-53 211.8 160 68.8
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 4.4e-53 211.8 186 63.4
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 9.9e-53 210.7 164 67.1
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 1.3e-52 210.3 217 56.7
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.2e-52 209.5 161 72.7
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 1.6e-50 203.4 129 77.5
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 8.7e-49 197.6 163 63.8
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 6.9e-46 188.0 149 65.1
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 4.5e-45 185.3 130 70.8
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 9.9e-45 184.1 147 63.9
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 3.8e-44 182.2 111 80.2
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 1.9e-43 179.9 201 54.7
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 2.1e-42 176.4 132 70.5
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.7e-42 176.0 143 66.4
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 1.0e-41 174.1 156 60.9
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 2.3e-41 172.9 156 60.3
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 3.0e-41 172.6 158 60.8
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.9e-41 172.2 102 83.3
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.5e-40 169.5 106 79.2
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 7.4e-40 167.9 131 67.2
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 4.0e-38 162.2 132 67.4
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 6.9e-38 161.4 130 68.5
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 6.9e-38 161.4 130 68.5
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.2e-37 160.6 129 65.1
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 1.5e-37 160.2 156 51.9
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.7e-36 156.8 130 68.5
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 2.2e-36 156.4 144 52.8
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 1.6e-34 150.2 82 89.0
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 4.6e-34 148.7 154 51.3
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 8.7e-33 144.4 136 55.1
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 7.4e-32 141.4 140 49.3
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 9.6e-32 141.0 144 48.6
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.4e-30 137.1 121 61.2
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 3.1e-30 136.0 103 59.2
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.5e-24 117.1 84 72.6
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 1.1e-22 110.9 157 45.2
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 5.5e-19 98.6 86 64.0
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 3.3e-16 89.4 58 72.4
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 7.9e-10 68.2 132 40.9
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 3.0e-09 66.2 104 46.2
BcaB05g21931 Brassica carinata HOM05D004525 ORTHO05D005295 8.8e-09 64.7 43 76.7
Cre12.g556450 Chlamydomonas reinhardtii HOM05D004525 ORTHO05D005295 1.8e-06 57.0 134 31.3
SpUn0008_0090 Schrenkiella parvula HOM05D000004 ORTHO05D027095 4.1e-06 55.8 59 50.8


User provided reference genes

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