Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 5.8e-112 407.5 200 100.0
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 2.5e-86 322.4 198 77.8
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.5e-62 243.4 189 64.0
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.2e-62 241.9 195 62.6
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 7.2e-62 241.1 186 65.6
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.7e-61 239.2 189 63.0
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 8.0e-61 237.7 184 64.7
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.4e-60 236.9 189 63.0
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 5.2e-60 235.0 188 63.8
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 8.8e-60 234.2 198 60.1
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 2.6e-59 232.6 190 62.6
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 4.4e-59 231.9 195 61.0
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 4.4e-59 231.9 189 62.4
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 9.7e-59 230.7 192 62.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 9.7e-59 230.7 194 57.7
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 1.3e-58 230.3 195 57.4
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 2.2e-58 229.6 190 61.6
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 3.7e-58 228.8 185 61.1
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.8e-58 228.4 196 59.2
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 8.2e-58 227.6 199 56.8
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 8.2e-58 227.6 184 62.5
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 1.1e-57 227.3 184 62.5
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.4e-57 226.9 207 56.5
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 1.8e-57 226.5 194 59.3
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 2.4e-57 226.1 195 61.0
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 3.1e-57 225.7 183 61.2
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.6e-56 223.4 192 57.3
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.0e-56 223.0 192 56.2
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 5.9e-56 221.5 188 56.9
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.3e-55 220.3 191 55.0
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 2.2e-55 219.5 187 59.9
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 2.9e-55 219.2 193 56.5
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.9e-55 219.2 197 54.3
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 8.5e-55 217.6 188 57.4
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.5e-54 216.9 192 55.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 2.5e-54 216.1 187 56.1
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.5e-54 216.1 195 53.8
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 3.2e-54 215.7 170 61.2
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.1e-53 213.0 175 56.6
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 2.1e-53 213.0 196 54.1
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 8.0e-53 211.1 189 55.0
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.4e-52 210.3 186 58.1
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.4e-52 210.3 201 51.7
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.8e-52 209.9 196 57.7
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.8e-52 209.9 190 54.7
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.8e-52 209.9 190 54.7
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 2.3e-52 209.5 190 54.7
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 3.0e-52 209.1 194 53.1
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 3.0e-52 209.1 188 56.4
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 4.0e-52 208.8 199 51.8
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 4.0e-52 208.8 190 55.3
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 5.2e-52 208.4 186 56.5
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 1.2e-51 207.2 194 52.6
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.2e-51 207.2 177 58.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 1.5e-51 206.8 184 58.7
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.0e-51 206.5 184 58.2
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 2.6e-51 206.1 202 52.5
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 4.4e-51 205.3 194 52.6
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 1.1e-49 200.7 185 54.1
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 1.1e-49 200.7 187 56.7
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.4e-49 199.5 192 52.6
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.1e-49 199.1 191 50.8
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 3.1e-49 199.1 185 56.8
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 4.1e-49 198.7 196 52.6
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 4.1e-49 198.7 180 57.8
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 7.0e-49 198.0 192 52.6
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 9.1e-49 197.6 181 54.7
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 2.0e-48 196.4 181 50.8
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 3.5e-48 195.7 186 50.0
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 4.5e-48 195.3 184 55.4
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 1.7e-47 193.4 184 51.6
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 3.8e-47 192.2 199 50.8
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.8e-41 173.3 192 45.8
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 4.5e-40 168.7 183 49.2
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 2.6e-35 152.9 207 42.5
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.0e-31 139.4 275 34.2
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.6e-29 132.5 260 30.8
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.7e-29 132.1 170 47.6
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.0e-28 129.0 199 39.2
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 8.9e-28 127.9 85 70.6
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.5e-27 124.8 186 43.0
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.8e-27 124.4 185 39.5
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 4.9e-26 122.1 194 40.7
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-25 120.6 191 37.7
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.0e-23 114.4 205 34.6
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.9e-23 112.5 200 33.5
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.5e-22 107.8 121 48.8
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.2e-21 105.1 191 40.8
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.1e-20 104.4 178 33.7
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-20 103.2 98 52.0
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 3.1e-20 102.8 82 58.5
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.2e-20 102.1 193 38.3
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-19 100.1 173 36.4
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.4e-19 99.0 175 34.9
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.4e-18 95.1 99 50.5
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-17 94.0 175 32.6
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.0e-12 75.9 117 38.5
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 2.6e-11 73.2 130 34.6
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 1.3e-10 70.9 177 28.8
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.9e-10 69.7 163 30.7
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.9e-09 67.0 111 35.1
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 7.8e-08 61.6 114 29.8
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 2.5e-06 56.6 115 34.8


User provided reference genes

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