Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 2.4e-34 148.3 74 100.0
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 4.0e-18 94.4 74 67.6
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 3.4e-17 91.3 79 65.8
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 3.2e-15 84.7 77 64.9
HanXRQChr06g0171331 Helianthus annuus HOM05D005953 ORTHO05D004056 1.2e-14 82.8 77 59.7
Lsat_1_v5_gn_4_66421 Lactuca sativa HOM05D005953 ORTHO05D004056 3.9e-13 77.8 66 62.1
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 4.8e-11 70.9 73 54.8
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 4.8e-11 70.9 73 54.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 8.1e-11 70.1 74 56.8
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.8e-10 68.9 83 54.2
HanXRQChr17g0556381 Helianthus annuus HOM05D005953 ORTHO05D004056 2.4e-10 68.6 75 56.0
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 3.1e-10 68.2 78 53.8
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 4.0e-10 67.8 78 53.8
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 5.3e-10 67.4 76 59.2
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 9.0e-10 66.6 76 50.0
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 9.0e-10 66.6 76 52.6
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.0e-09 65.5 79 51.9
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.6e-09 65.1 79 50.6
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 3.4e-09 64.7 76 52.6
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.4e-09 64.7 84 52.4
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 4.5e-09 64.3 76 53.9
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.5e-09 64.3 83 48.2
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 5.8e-09 63.9 74 52.7
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 5.8e-09 63.9 74 52.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 7.6e-09 63.5 81 48.1
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 7.6e-09 63.5 77 49.4
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 1.3e-08 62.8 74 54.1
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.3e-08 62.8 83 49.4
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.3e-08 62.8 80 52.5
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.7e-08 62.4 75 50.7
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.7e-08 62.4 74 51.4
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.7e-08 62.4 75 53.3
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 1.7e-08 62.4 75 53.3
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 1.7e-08 62.4 74 54.1
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 1.7e-08 62.4 80 48.8
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.8e-08 61.2 76 50.0
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 3.8e-08 61.2 77 51.9
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 3.8e-08 61.2 75 48.0
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 3.8e-08 61.2 74 48.6
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.9e-08 60.8 74 43.2
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 4.9e-08 60.8 74 50.0
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 6.5e-08 60.5 78 50.0
Hund01100 Selenicereus undatus HOM05D005953 ORTHO05D004056 6.5e-08 60.5 75 50.7
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 8.4e-08 60.1 80 50.0
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 8.4e-08 60.1 80 53.8
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 8.4e-08 60.1 76 51.3
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 8.4e-08 60.1 82 50.0
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 1.1e-07 59.7 82 47.6
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 1.1e-07 59.7 79 48.1
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 1.1e-07 59.7 80 50.0
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.4e-07 59.3 77 48.1
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 1.9e-07 58.9 74 48.6
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 1.9e-07 58.9 76 47.4
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 1.9e-07 58.9 76 52.6
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.9e-07 58.9 75 48.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 2.5e-07 58.5 80 46.2
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 2.5e-07 58.5 76 50.0
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 2.5e-07 58.5 92 47.8
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 3.2e-07 58.2 78 46.2
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 3.2e-07 58.2 77 45.5
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 3.2e-07 58.2 81 46.9
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.2e-07 58.2 82 46.3
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 3.2e-07 58.2 76 50.0
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 4.2e-07 57.8 74 48.6
ATR0776G010 Amborella trichopoda HOM05D045262 ORTHO05D004056 5.5e-07 57.4 98 42.9
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 5.5e-07 57.4 74 50.0
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 5.5e-07 57.4 75 46.7
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 5.5e-07 57.4 86 45.3
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 7.1e-07 57.0 79 43.0
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 7.1e-07 57.0 83 49.4
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 9.3e-07 56.6 74 48.6
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 9.3e-07 56.6 81 50.6
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 9.3e-07 56.6 81 50.6
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 9.3e-07 56.6 80 45.0
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 9.3e-07 56.6 80 45.0
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 9.3e-07 56.6 85 45.9
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 9.3e-07 56.6 76 48.7
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 1.6e-06 55.8 80 45.0
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 1.6e-06 55.8 87 41.4
SEGI_25776 Sequoiadendron giganteum HOM05D025024 ORTHO05D004056 1.6e-06 55.8 75 48.0
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 1.6e-06 55.8 74 48.6
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.6e-06 55.8 78 51.3
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.6e-06 55.8 78 51.3
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 2.7e-06 55.1 79 48.1
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 2.7e-06 55.1 78 47.4
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 2.7e-06 55.1 76 43.4
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.5e-06 54.7 76 40.8
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 3.5e-06 54.7 75 48.0
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 3.5e-06 54.7 80 42.5
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 4.6e-06 54.3 81 44.4
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 4.6e-06 54.3 74 47.3
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.6e-06 54.3 84 46.4
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 4.6e-06 54.3 74 47.3
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.6e-06 54.3 74 47.3
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.6e-06 54.3 74 47.3
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.6e-06 54.3 74 47.3
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 4.6e-06 54.3 74 43.2
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 4.6e-06 54.3 83 45.8
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 4.6e-06 54.3 71 43.7
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 4.6e-06 54.3 74 44.6
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 6.0e-06 53.9 75 46.7
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 7.9e-06 53.5 74 43.2
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 7.9e-06 53.5 76 39.5
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 7.9e-06 53.5 76 39.5
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 7.9e-06 53.5 79 45.6
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 7.9e-06 53.5 79 44.3


User provided reference genes

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