Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2926 Erigeron canadensis HOM05D000934 ORTHO05D000746 1.1e-69 266.5 136 100.0
ECA234G2835 Erigeron canadensis HOM05D000934 ORTHO05D000746 1.6e-25 119.8 101 66.3
DCAR_022016 Daucus carota HOM05D000934 ORTHO05D000746 3.2e-13 79.0 86 45.3
Lsat_1_v5_gn_5_112301 Lactuca sativa HOM05D000934 ORTHO05D000746 2.7e-12 75.9 62 62.9
ECA236G3358 Erigeron canadensis HOM05D000934 ORTHO05D000746 2.3e-11 72.8 74 51.4
Oeu013720.1 Olea europaea HOM05D000934 ORTHO05D000746 4.4e-10 68.6 62 58.1
Sabra04G0092200 Salix brachista HOM05D000934 ORTHO05D000746 7.4e-10 67.8 74 51.4
Haze_10096 Corylus avellana HOM05D000934 ORTHO05D000746 9.7e-10 67.4 140 33.6
Potri.004G140200 Populus trichocarpa HOM05D000934 ORTHO05D000746 1.3e-09 67.0 73 49.3
Eucgr.I01136 Eucalyptus grandis HOM05D000934 ORTHO05D000746 1.7e-09 66.6 69 53.6
Gohir.A12G023100 Gossypium hirsutum HOM05D000934 ORTHO05D000746 2.2e-09 66.2 65 56.9
Nn5g30260 Nelumbo nucifera HOM05D000934 ORTHO05D000746 2.2e-09 66.2 80 47.5
Migut.B00360 Erythranthe guttata HOM05D000934 ORTHO05D000746 3.7e-09 65.5 72 50.0
Gohir.D12G023800 Gossypium hirsutum HOM05D000934 ORTHO05D000746 3.7e-09 65.5 71 56.3
Gorai.008G024200 Gossypium raimondii HOM05D000934 ORTHO05D000746 3.7e-09 65.5 71 56.3
Rhsim11G0164800 Rhododendron simsii HOM05D000934 ORTHO05D000746 3.7e-09 65.5 63 54.0
HanXRQChr11g0331401 Helianthus annuus HOM05D000934 ORTHO05D000746 4.8e-09 65.1 71 49.3
COL.COLO4_32638 Corchorus olitorius HOM05D000934 ORTHO05D000746 6.3e-09 64.7 65 55.4
Duzib052G0678 Durio zibethinus HOM05D000934 ORTHO05D000746 8.2e-09 64.3 69 53.6
arahy.Tifrunner.gnm1.ann1.P5FIKQ Arachis hypogaea HOM05D000934 ORTHO05D000746 1.1e-08 63.9 121 33.1
Ca_18703_v3 Cicer arietinum L. HOM05D000934 ORTHO05D000746 1.8e-08 63.2 59 57.6
Duzib132G0360 Durio zibethinus HOM05D000934 ORTHO05D000746 1.8e-08 63.2 69 52.2
vmacro05306 Vaccinium macrocarpon HOM05D000934 ORTHO05D000746 1.8e-08 63.2 63 52.4
Prupe.8G127500 Prunus persica HOM05D000934 ORTHO05D000746 2.4e-08 62.8 67 53.7
CAN.G1041.42 Capsicum annuum HOM05D000934 ORTHO05D000746 3.1e-08 62.4 75 50.7
SalBow6G4628 Salvia bowleyana HOM05D000934 ORTHO05D000746 3.1e-08 62.4 59 52.5
PGSC0003DMG400025885 Solanum tuberosum HOM05D000934 ORTHO05D000746 3.1e-08 62.4 72 50.0
Thecc.02G102600 Theobroma cacao HOM05D000934 ORTHO05D000746 3.1e-08 62.4 82 46.3
Cpa.g.sc1524.3 Carica papaya HOM05D000934 ORTHO05D000746 4.1e-08 62.0 65 49.2
Glyma.07G214100 Glycine max HOM05D000934 ORTHO05D000746 4.1e-08 62.0 70 51.4
Medtr5g017090 Medicago truncatula HOM05D000934 ORTHO05D000746 4.1e-08 62.0 61 50.8
Peaxi162Scf00016g02029 Petunia axillaris HOM05D000934 ORTHO05D000746 4.1e-08 62.0 70 51.4
Solyc01g107990.3 Solanum lycopersicum HOM05D000934 ORTHO05D000746 4.1e-08 62.0 72 50.0
Thecc.01G058300 Theobroma cacao HOM05D000934 ORTHO05D000746 4.1e-08 62.0 61 49.2
CSS0006898 Camellia sinensis var. sinensis HOM05D000934 ORTHO05D000746 5.3e-08 61.6 75 48.0
CANSAT25G1211 Cannabis sativa HOM05D000934 ORTHO05D000746 5.3e-08 61.6 68 48.5
Manes.10G079200 Manihot esculenta HOM05D000934 ORTHO05D000746 5.3e-08 61.6 70 50.0
Nitab4.5_0001428g0080 Nicotiana tabacum HOM05D000934 ORTHO05D000746 5.3e-08 61.6 60 55.0
QL11p035197 Quercus lobata HOM05D000934 ORTHO05D000746 5.3e-08 61.6 74 51.4
AUR62010238 Chenopodium quinoa HOM05D000934 ORTHO05D000746 7.0e-08 61.2 60 53.3
Ciclev10028578m.g Citrus clementina HOM05D000934 ORTHO05D000746 7.0e-08 61.2 84 44.0
Glyma.02G102800 Glycine max HOM05D000934 ORTHO05D000746 7.0e-08 61.2 56 57.1
Sopen01g050190 Solanum pennellii HOM05D000934 ORTHO05D000746 7.0e-08 61.2 81 45.7
MSTRG.20164 Avicennia marina HOM05D000934 ORTHO05D000746 9.1e-08 60.8 80 46.2
CANSAT01G2392 Cannabis sativa HOM05D000934 ORTHO05D000746 9.1e-08 60.8 94 41.5
AUR62013221 Chenopodium quinoa HOM05D000934 ORTHO05D000746 9.1e-08 60.8 60 53.3
ClCG05G010070 Citrullus lanatus HOM05D000934 ORTHO05D000746 9.1e-08 60.8 74 45.9
Duzib187G0013 Durio zibethinus HOM05D000934 ORTHO05D000746 9.1e-08 60.8 74 44.6
Duzib264G0065 Durio zibethinus HOM05D000934 ORTHO05D000746 9.1e-08 60.8 61 50.8
HanXRQChr07g0188021 Helianthus annuus HOM05D000934 ORTHO05D000746 9.1e-08 60.8 94 41.5
Hma1.2p1_0909F.1_g235760 Hydrangea macrophylla HOM05D000934 ORTHO05D000746 9.1e-08 60.8 82 42.7
Rhsim10G0116000 Rhododendron simsii HOM05D000934 ORTHO05D000746 9.1e-08 60.8 81 43.2
Sabra05G0111400 Salix brachista HOM05D000934 ORTHO05D000746 9.1e-08 60.8 64 51.6
SGA_v2.0_scaffold269G46288 Striga asiatica HOM05D000934 ORTHO05D000746 9.1e-08 60.8 58 55.2
GSVIVG01022115001 Vitis vinifera HOM05D000934 ORTHO05D000746 9.1e-08 60.8 71 47.9
Actinidia12046 Actinidia chinensis HOM05D000934 ORTHO05D000746 1.2e-07 60.5 61 50.8
Cc02_g18920 Coffea canephora HOM05D000934 ORTHO05D000746 1.2e-07 60.5 59 52.5
Dinv15728 Davidia involucrata HOM05D000934 ORTHO05D000746 1.2e-07 60.5 74 45.9
Lj4g0027546 Lotus japonicus HOM05D000934 ORTHO05D000746 1.2e-07 60.5 72 50.0
Phvul.011G058300 Phaseolus vulgaris HOM05D000934 ORTHO05D000746 1.2e-07 60.5 62 50.0
Psat2g166560 Pisum sativum HOM05D000934 ORTHO05D000746 1.2e-07 60.5 61 47.5
Potri.007G045200 Populus trichocarpa HOM05D000934 ORTHO05D000746 1.2e-07 60.5 62 51.6
TAR628G0172 Trochodendron aralioides HOM05D000934 ORTHO05D000746 1.2e-07 60.5 70 48.6
Atru.chr5.2667 Acer truncatum HOM05D000934 ORTHO05D000746 1.5e-07 60.1 76 47.4
Actinidia00430 Actinidia chinensis HOM05D000934 ORTHO05D000746 1.5e-07 60.1 74 47.3
arahy.Tifrunner.gnm1.ann1.PA1VEW Arachis hypogaea HOM05D000934 ORTHO05D000746 1.5e-07 60.1 63 50.8
Potri.005G139400 Populus trichocarpa HOM05D000934 ORTHO05D000746 1.5e-07 60.1 64 51.6
TPR.G30690 Trifolium pratense HOM05D000934 ORTHO05D000746 1.5e-07 60.1 62 50.0
GSVIVG01031721001 Vitis vinifera HOM05D000934 ORTHO05D000746 1.5e-07 60.1 69 49.3
COL.COLO4_11439 Corchorus olitorius HOM05D000934 ORTHO05D000746 2.0e-07 59.7 72 44.4
MD02G1173900 Malus domestica HOM05D000934 ORTHO05D000746 2.0e-07 59.7 64 45.3
Oeu044307.2 Olea europaea HOM05D000934 ORTHO05D000746 2.0e-07 59.7 54 59.3
Phvul.003G048300 Phaseolus vulgaris HOM05D000934 ORTHO05D000746 2.0e-07 59.7 68 48.5
Phvul.003G243100 Phaseolus vulgaris HOM05D000934 ORTHO05D000746 2.0e-07 59.7 58 51.7
arahy.Tifrunner.gnm1.ann1.FC000Y Arachis hypogaea HOM05D000934 ORTHO05D000746 2.6e-07 59.3 58 50.0
arahy.Tifrunner.gnm1.ann1.GE1UVX Arachis hypogaea HOM05D000934 ORTHO05D000746 2.6e-07 59.3 58 50.0
Glyma.17G172700 Glycine max HOM05D000934 ORTHO05D000746 2.6e-07 59.3 73 46.6
Hma1.2p1_0370F.1_g137680 Hydrangea macrophylla HOM05D000934 ORTHO05D000746 2.6e-07 59.3 69 46.4
Sp3g17390 Schrenkiella parvula HOM05D000934 ORTHO05D000746 2.6e-07 59.3 59 50.8
VMungo0251G0068 Vigna mungo HOM05D000934 ORTHO05D000746 2.6e-07 59.3 58 50.0
Ca_24761_v3 Cicer arietinum L. HOM05D000934 ORTHO05D000746 3.4e-07 58.9 62 48.4
Lj2g0027591 Lotus japonicus HOM05D000934 ORTHO05D000746 3.4e-07 58.9 61 49.2
Medtr4g085750 Medicago truncatula HOM05D000934 ORTHO05D000746 3.4e-07 58.9 60 55.0
Sabra07G0040100 Salix brachista HOM05D000934 ORTHO05D000746 3.4e-07 58.9 59 52.5
Sc03g0001660 Simmondsia chinensis HOM05D000934 ORTHO05D000746 3.4e-07 58.9 75 42.7
BolC7t46638H Brassica oleracea HOM05D000934 ORTHO05D000746 4.5e-07 58.5 67 47.8
MD05G1082900 Malus domestica HOM05D000934 ORTHO05D000746 4.5e-07 58.5 65 52.3
Os08g0103500 Oryza sativa ssp. japonica HOM05D000934 ORTHO05D000746 4.5e-07 58.5 61 50.8
Prupe.7G131800 Prunus persica HOM05D000934 ORTHO05D000746 4.5e-07 58.5 64 46.9
Aqoxy6G01291 Aquilegia oxysepala HOM05D000934 ORTHO05D000746 5.9e-07 58.2 48 56.2
AUR62001917 Chenopodium quinoa HOM05D000934 ORTHO05D000746 5.9e-07 58.2 62 48.4
HanXRQChr10g0301981 Helianthus annuus HOM05D000934 ORTHO05D000746 5.9e-07 58.2 49 59.2
Lalb_Chr05g0219261 Lupinus albus HOM05D000934 ORTHO05D000746 5.9e-07 58.2 60 55.0
Oeu062449.1 Olea europaea HOM05D000934 ORTHO05D000746 5.9e-07 58.2 61 49.2
RcHm_v2.0_Chr6g0257791 Rosa chinensis HOM05D000934 ORTHO05D000746 5.9e-07 58.2 70 50.0
Sc08g0001730 Simmondsia chinensis HOM05D000934 ORTHO05D000746 5.9e-07 58.2 46 58.7
TWI75G0075 Tripterygium wilfordii HOM05D000934 ORTHO05D000746 5.9e-07 58.2 53 58.5
Aa31LG6G14030 Aethionema arabicum HOM05D000934 ORTHO05D000746 7.7e-07 57.8 99 38.4
Ah.01g017830 Amaranthus hybridus HOM05D000934 ORTHO05D000746 7.7e-07 57.8 58 48.3
BcaC05g28500 Brassica carinata HOM05D000934 ORTHO05D000746 7.7e-07 57.8 64 45.3
A03p64910 Brassica napus HOM05D000934 ORTHO05D000746 7.7e-07 57.8 67 47.8
C05p45810 Brassica napus HOM05D000934 ORTHO05D000746 7.7e-07 57.8 64 45.3
BolC5t33301H Brassica oleracea HOM05D000934 ORTHO05D000746 7.7e-07 57.8 64 45.3
BraA03t15552Z Brassica rapa HOM05D000934 ORTHO05D000746 7.7e-07 57.8 67 47.8
CiPaw.05G007800 Carya illinoinensis HOM05D000934 ORTHO05D000746 7.7e-07 57.8 66 50.0
Psat7g125680 Pisum sativum HOM05D000934 ORTHO05D000746 7.7e-07 57.8 58 58.6
PGR102G3078 Punica granatum HOM05D000934 ORTHO05D000746 7.7e-07 57.8 61 49.2
QL06p041026 Quercus lobata HOM05D000934 ORTHO05D000746 7.7e-07 57.8 81 40.7
SGA_v2.0_scaffold90G27624 Striga asiatica HOM05D000934 ORTHO05D000746 7.7e-07 57.8 54 55.6
EL10Ac6g15732 Beta vulgaris HOM05D000934 ORTHO05D000746 1.0e-06 57.4 62 46.8
Glyma.01G187200 Glycine max HOM05D000934 ORTHO05D000746 1.0e-06 57.4 71 45.1
THA.LOC104825371 Tarenaya hassleriana HOM05D000934 ORTHO05D000746 1.0e-06 57.4 74 45.9
TPR.G12565 Trifolium pratense HOM05D000934 ORTHO05D000746 1.0e-06 57.4 73 50.7
VMungo0251G3209 Vigna mungo HOM05D000934 ORTHO05D000746 1.0e-06 57.4 59 50.8
Zm00001eb198840 Zea mays HOM05D000934 ORTHO05D000746 1.0e-06 57.4 58 50.0
Aa31LG8G6090 Aethionema arabicum HOM05D000934 ORTHO05D000746 1.3e-06 57.0 69 46.4
C07p62220 Brassica napus HOM05D000934 ORTHO05D000746 1.3e-06 57.0 99 40.4
AUR62003891 Chenopodium quinoa HOM05D000934 ORTHO05D000746 1.3e-06 57.0 62 46.8
Gorai.013G044900 Gossypium raimondii HOM05D000934 ORTHO05D000746 1.3e-06 57.0 69 46.4
Lj4C151T3 Lonicera japonica HOM05D000934 ORTHO05D000746 1.3e-06 57.0 80 38.8
EL10Ac9g21578 Beta vulgaris HOM05D000934 ORTHO05D000746 1.7e-06 56.6 78 44.9
BcaB06g25984 Brassica carinata HOM05D000934 ORTHO05D000746 1.7e-06 56.6 62 46.8
Cpa.g.sc55.136 Carica papaya HOM05D000934 ORTHO05D000746 1.7e-06 56.6 61 49.2
Gohir.A13G041300 Gossypium hirsutum HOM05D000934 ORTHO05D000746 1.7e-06 56.6 59 49.2
MBI16_g44538_MAGBIO Magnolia biondii HOM05D000934 ORTHO05D000746 1.7e-06 56.6 58 51.7
vmacro02038 Vaccinium macrocarpon HOM05D000934 ORTHO05D000746 1.7e-06 56.6 64 46.9
arahy.Tifrunner.gnm1.ann1.9JW9VH Arachis hypogaea HOM05D000934 ORTHO05D000746 2.2e-06 56.2 61 47.5
A06p03750 Brassica napus HOM05D000934 ORTHO05D000746 2.2e-06 56.2 56 48.2
Cc07_g06100 Coffea canephora HOM05D000934 ORTHO05D000746 2.2e-06 56.2 71 42.3
Haze_15383 Corylus avellana HOM05D000934 ORTHO05D000746 2.2e-06 56.2 62 48.4
Gohir.D13G040000 Gossypium hirsutum HOM05D000934 ORTHO05D000746 2.2e-06 56.2 59 50.8
Nn1g04806 Nelumbo nucifera HOM05D000934 ORTHO05D000746 2.2e-06 56.2 63 50.8
Oeu014832.1 Olea europaea HOM05D000934 ORTHO05D000746 2.2e-06 56.2 61 49.2
A05p30290 Brassica napus HOM05D000934 ORTHO05D000746 2.9e-06 55.8 59 47.5
BraA05t21867Z Brassica rapa HOM05D000934 ORTHO05D000746 2.9e-06 55.8 59 47.5
CDE02G0288 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 2.9e-06 55.8 58 50.0
CDE08G0420 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 2.9e-06 55.8 58 50.0
CsaV3_3G018470 Cucumis sativus L. HOM05D000934 ORTHO05D000746 2.9e-06 55.8 62 48.4
Migut.H00423 Erythranthe guttata HOM05D000934 ORTHO05D000746 2.9e-06 55.8 61 49.2
RcHm_v2.0_Chr2g0105901 Rosa chinensis HOM05D000934 ORTHO05D000746 2.9e-06 55.8 79 41.8
Hund00111 Selenicereus undatus HOM05D000934 ORTHO05D000746 2.9e-06 55.8 44 59.1
SEGI_20694 Sequoiadendron giganteum HOM05D000934 ORTHO05D000746 2.9e-06 55.8 98 38.8
MSTRG.2872 Avicennia marina HOM05D000934 ORTHO05D000746 3.8e-06 55.5 56 53.6
CARHR245560 Cardamine hirsuta HOM05D000934 ORTHO05D000746 3.8e-06 55.5 89 41.6
FvH4_1g16200 Fragaria vesca HOM05D000934 ORTHO05D000746 3.8e-06 55.5 66 42.4
FAN19G1541 Fragaria x ananassa HOM05D000934 ORTHO05D000746 3.8e-06 55.5 66 42.4
FAN23G1123 Fragaria x ananassa HOM05D000934 ORTHO05D000746 3.8e-06 55.5 66 42.4
FAN26G1884 Fragaria x ananassa HOM05D000934 ORTHO05D000746 3.8e-06 55.5 66 42.4
FAN28G2630 Fragaria x ananassa HOM05D000934 ORTHO05D000746 3.8e-06 55.5 66 42.4
Oeu031965.1 Olea europaea HOM05D000934 ORTHO05D000746 3.8e-06 55.5 61 49.2
PGR142G0737 Punica granatum HOM05D000934 ORTHO05D000746 3.8e-06 55.5 84 41.7
Sed0002740 Sechium edule HOM05D000934 ORTHO05D000746 3.8e-06 55.5 59 49.2
VMungo1127G0055 Vigna mungo HOM05D000934 ORTHO05D000746 3.8e-06 55.5 60 48.3
AT3G19310 Arabidopsis thaliana HOM05D000934 ORTHO05D000746 5.0e-06 55.1 65 44.6
ECA238G0841 Erigeron canadensis HOM05D000934 ORTHO05D000746 5.0e-06 55.1 95 38.9
Thhalv10025378m.g Eutrema salsugineum HOM05D000934 ORTHO05D000746 5.0e-06 55.1 65 46.2
GSVIVG01009283001 Vitis vinifera HOM05D000934 ORTHO05D000746 5.0e-06 55.1 61 47.5
AL3G32710 Arabidopsis lyrata HOM05D000934 ORTHO05D000746 6.5e-06 54.7 65 44.6
BcaNung05427 Brassica carinata HOM05D000934 ORTHO05D000746 6.5e-06 54.7 99 37.4
Carub.0001s3895 Capsella rubella HOM05D000934 ORTHO05D000746 6.5e-06 54.7 52 51.9
Thhalv10020826m.g Eutrema salsugineum HOM05D000934 ORTHO05D000746 6.5e-06 54.7 59 47.5
Glyma.11G054900 Glycine max HOM05D000934 ORTHO05D000746 6.5e-06 54.7 61 47.5
Nitab4.5_0003080g0020 Nicotiana tabacum HOM05D000934 ORTHO05D000746 6.5e-06 54.7 48 54.2
Sed0007419 Sechium edule HOM05D000934 ORTHO05D002046 6.5e-06 54.7 72 44.4
THA.LOC104817107 Tarenaya hassleriana HOM05D000934 ORTHO05D000746 6.5e-06 54.7 74 41.9
Lalb_Chr05g0213311 Lupinus albus HOM05D000934 ORTHO05D000746 8.5e-06 54.3 61 47.5
Sp1g36630 Schrenkiella parvula HOM05D000934 ORTHO05D000746 8.5e-06 54.3 52 50.0
THA.LOC104798795 Tarenaya hassleriana HOM05D000934 ORTHO05D000746 8.5e-06 54.3 70 45.7


User provided reference genes

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