Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 7.2e-77 290.4 139 100.0
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 3.4e-42 175.3 139 64.7
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.4e-27 126.7 128 53.9
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 8.9e-27 124.0 98 60.2
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 4.4e-26 121.7 128 47.7
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 5.6e-21 104.8 137 48.2
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 3.1e-19 99.0 134 44.8
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 1.2e-18 97.1 139 45.3
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 2.0e-18 96.3 138 43.5
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 2.0e-18 96.3 113 50.4
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 3.4e-18 95.5 138 44.2
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 5.8e-18 94.7 138 44.9
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.2e-17 92.8 116 44.8
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.2e-17 92.8 128 46.9
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.9e-16 89.7 134 38.1
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.9e-16 89.7 137 40.1
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.2e-16 89.0 133 39.8
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.7e-15 85.9 123 42.3
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 4.6e-15 85.1 141 42.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 6.0e-15 84.7 133 42.9
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 6.0e-15 84.7 132 43.9
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 7.8e-15 84.3 134 41.8
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.0e-14 84.0 113 48.7
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.3e-14 83.6 122 42.6
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.7e-14 83.2 138 42.8
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 6.6e-14 81.3 135 43.0
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 1.1e-13 80.5 140 40.7
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 1.1e-13 80.5 140 40.7
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 1.5e-13 80.1 150 39.3
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 3.3e-13 79.0 132 41.7
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 3.3e-13 79.0 134 42.5
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 5.6e-13 78.2 138 37.7
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 7.3e-13 77.8 143 39.9
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 9.6e-13 77.4 139 42.4
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.3e-12 77.0 124 43.5
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 1.6e-12 76.6 128 39.1
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.6e-12 76.6 136 35.3
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.6e-12 76.6 124 42.7
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 1.6e-12 76.6 125 41.6
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 2.1e-12 76.3 112 43.8
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 2.1e-12 76.3 112 43.8
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 2.1e-12 76.3 112 43.8
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 2.1e-12 76.3 112 43.8
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 2.1e-12 76.3 131 38.9
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 2.1e-12 76.3 112 44.6
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.8e-12 75.9 124 42.7
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 6.2e-12 74.7 98 46.9
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 6.2e-12 74.7 98 46.9
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 6.2e-12 74.7 121 40.5
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 6.2e-12 74.7 127 39.4
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 6.2e-12 74.7 140 38.6
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.1e-11 73.9 142 38.0
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 1.4e-11 73.6 173 33.5
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 1.8e-11 73.2 135 41.5
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 2.4e-11 72.8 124 38.7
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 2.4e-11 72.8 145 38.6
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 4.0e-11 72.0 129 38.8
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 4.0e-11 72.0 135 37.0
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 5.3e-11 71.6 117 42.7
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 5.3e-11 71.6 93 46.2
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 9.0e-11 70.9 138 39.9
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 9.0e-11 70.9 117 41.0
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 2.0e-10 69.7 97 46.4
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 2.6e-10 69.3 94 44.7
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 3.4e-10 68.9 97 45.4
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 4.4e-10 68.6 138 33.3
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 4.4e-10 68.6 131 39.7
Gohir.D01G197650 Gossypium hirsutum HOM05D006722 ORTHO05D007944 5.8e-10 68.2 117 40.2
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 7.6e-10 67.8 119 38.7
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 7.6e-10 67.8 126 39.7
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 9.9e-10 67.4 140 36.4
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.7e-09 66.6 94 45.7
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 2.2e-09 66.2 139 34.5
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 2.2e-09 66.2 137 37.2
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.9e-09 65.9 141 33.3
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 3.8e-09 65.5 86 47.7
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 8.4e-09 64.3 127 40.2
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 1.9e-08 63.2 131 34.4
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 3.2e-08 62.4 89 46.1
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 3.2e-08 62.4 130 37.7
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 3.2e-08 62.4 85 48.2
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 7.1e-08 61.2 189 27.5
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.2e-07 60.5 124 37.1
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.2e-07 60.5 124 37.1
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 1.2e-07 60.5 124 37.1
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.6e-07 60.1 130 36.9
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 4.6e-07 58.5 140 38.6
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 1.7e-06 56.6 59 59.3
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 2.3e-06 56.2 30 80.0
HPP92_001821 Vanilla planifolia HOM05D026263 ORTHO05D007944 3.0e-06 55.8 99 38.4
MELO3C013561.2 Cucumis melo HOM05D006722 ORTHO05D007944 3.9e-06 55.5 130 34.6


User provided reference genes

Program Settings