Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.7e-244 848.2 425 100.0
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 3.2e-208 728.4 420 85.7
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 5.3e-179 631.3 418 74.9
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.0e-178 629.4 407 73.7
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 4.5e-178 628.2 409 74.6
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 7.6e-178 627.5 410 73.7
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 9.9e-178 627.1 422 73.2
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 6.4e-177 624.4 410 74.1
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 8.4e-177 624.0 415 74.0
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.4e-176 623.2 410 73.4
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 3.2e-176 622.1 411 73.5
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.7e-175 619.0 416 73.1
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 6.0e-175 617.8 420 71.2
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 6.0e-175 617.8 424 71.2
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.8e-174 616.3 409 72.1
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.0e-174 615.5 410 71.7
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 1.1e-173 613.6 415 71.3
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.5e-173 612.5 420 71.7
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.8e-172 609.0 407 73.5
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 2.8e-172 609.0 457 68.3
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 4.8e-172 608.2 409 71.1
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 6.2e-172 607.8 409 72.6
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 8.1e-172 607.4 407 73.0
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 4.0e-171 605.1 410 72.7
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 2.6e-170 602.4 418 69.4
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 3.4e-170 602.1 409 70.7
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 5.8e-170 601.3 419 69.9
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 1.7e-169 599.7 409 70.9
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 2.2e-169 599.4 407 70.0
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 3.8e-169 598.6 417 69.5
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.1e-168 597.0 417 69.5
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 3.2e-168 595.5 437 68.4
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 9.3e-168 594.0 412 68.7
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.2e-167 593.6 438 68.3
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.6e-167 593.2 409 69.9
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 2.7e-167 592.4 410 68.5
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 3.5e-167 592.0 407 68.8
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 2.3e-166 589.3 414 69.3
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 3.0e-166 589.0 490 61.2
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 1.1e-165 587.0 432 67.1
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 5.6e-165 584.7 410 69.3
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 9.6e-165 583.9 421 67.9
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.4e-163 580.1 419 66.1
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 4.0e-163 578.6 412 66.3
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 2.6e-162 575.9 422 67.1
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 1.7e-161 573.2 412 68.2
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.5e-161 571.2 420 67.1
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.4e-160 570.1 420 67.1
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.2e-159 567.0 410 68.5
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 4.6e-159 565.1 418 65.3
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 1.0e-158 563.9 362 73.8
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 5.1e-158 561.6 417 64.3
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 1.5e-157 560.1 485 59.2
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-157 559.7 399 68.2
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 3.3e-157 558.9 421 66.3
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 4.3e-157 558.5 364 73.4
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.3e-156 557.0 421 63.9
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 3.7e-156 555.4 432 64.1
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 1.4e-155 553.5 368 73.9
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 5.3e-155 551.6 409 63.3
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 2.5e-152 542.7 424 63.0
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.6e-151 540.0 420 66.7
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.4e-149 531.2 415 65.3
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.2e-148 529.6 422 62.6
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 4.8e-148 528.5 413 64.6
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 1.1e-144 517.3 436 60.6
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 1.9e-144 516.5 420 62.6
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 7.4e-141 504.6 349 69.9
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 2.2e-140 503.1 333 75.1
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 3.7e-140 502.3 482 57.7
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 1.1e-139 500.7 344 69.5
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 7.0e-139 498.0 345 71.6
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.5e-138 495.4 326 74.2
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 4.2e-136 488.8 276 86.6
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.1e-135 486.5 433 58.7
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 7.2e-120 434.9 404 53.0
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 7.5e-117 424.9 397 55.7
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.6e-114 417.2 279 72.8
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-114 417.2 420 50.0
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 1.6e-114 417.2 266 76.3
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.7e-113 413.7 287 70.7
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.2e-109 401.0 424 47.6
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 2.4e-107 393.3 277 68.6
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.5e-106 389.4 419 48.2
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 1.7e-105 387.1 415 48.4
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 9.2e-99 364.8 408 44.9
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 3.5e-90 336.3 276 58.7
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 2.5e-88 330.1 272 62.9
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 1.1e-86 324.7 540 38.0
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 3.1e-86 323.2 413 42.4
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 5.2e-86 322.4 414 41.5
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 4.4e-85 319.3 315 51.4
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.3e-81 307.8 299 54.8
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.3e-81 307.8 249 59.8
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.3e-81 307.0 415 39.5
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.1e-81 305.8 425 39.1
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 6.2e-79 298.9 423 39.5
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.2e-77 294.7 446 37.4
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 2.2e-76 290.4 424 38.7
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 5.4e-75 285.8 192 72.9
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.2e-75 285.0 412 40.3
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.3e-65 253.8 190 65.3
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.1e-62 245.0 340 39.7
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 4.5e-61 239.6 366 38.8
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.9e-61 238.4 425 34.6
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 2.5e-56 223.8 256 50.8
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 7.4e-56 222.2 156 69.9
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 7.6e-53 212.2 156 67.3
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 5.5e-51 206.1 405 34.1
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 1.3e-49 201.4 393 33.3
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 3.9e-49 199.9 396 33.6
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 3.3e-48 196.8 200 53.5
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 1.4e-43 181.4 222 50.5
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 6.1e-42 176.0 328 32.3
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.1e-38 165.2 259 40.2
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.2e-37 161.8 315 34.3
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 1.5e-37 161.4 98 77.6
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 2.0e-37 161.0 132 63.6
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.6e-37 160.6 125 60.8
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 3.2e-35 153.7 103 72.8
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.6e-34 150.2 133 52.6
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 4.6e-34 149.8 182 43.4
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.9e-34 149.1 112 66.1
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.4e-32 142.5 125 52.8
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.9e-30 136.0 276 32.2
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.2e-29 135.2 203 37.9
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.9e-26 122.5 257 31.1
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.0e-25 122.1 148 43.9
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 9.7e-24 115.5 84 67.9
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.8e-23 114.0 170 38.2
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 2.4e-22 110.9 76 69.7
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 5.0e-20 103.2 55 80.0
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 7.2e-19 99.4 80 56.2
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.3e-15 88.6 77 48.1
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.1e-14 84.0 104 35.6
Cre12.g549600 Chlamydomonas reinhardtii HOM05D005467 ORTHO05D006523 2.5e-11 74.3 251 25.9
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 1.8e-09 68.2 41 75.6
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 6.3e-07 59.7 174 29.3
SEGI_39271 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 4.1e-06 57.0 41 63.4


User provided reference genes

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