Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.9e-154 548.5 277 100.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.3e-114 416.8 281 75.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.1e-112 409.5 278 77.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-100 370.5 285 67.4
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 7.8e-99 364.4 285 66.7
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 7.8e-99 364.4 281 65.5
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.3e-98 363.6 282 66.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 6.6e-98 361.3 279 64.9
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.3e-97 357.8 280 65.0
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.8e-95 353.2 271 65.3
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.7e-93 346.7 276 65.6
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.2e-93 346.3 276 63.8
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.2e-93 346.3 276 63.8
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 6.4e-93 344.7 270 64.8
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 8.4e-93 344.4 282 63.5
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.1e-91 339.7 279 62.0
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.1e-91 339.7 283 62.5
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 7.8e-91 337.8 276 63.8
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.9e-90 335.5 315 57.8
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 3.3e-89 332.4 270 61.1
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 7.3e-89 331.3 282 61.0
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.1e-88 329.7 289 60.2
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 6.2e-88 328.2 278 60.4
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 8.1e-88 327.8 283 60.1
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.1e-87 327.4 285 59.3
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.1e-87 327.4 284 61.3
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.1e-87 327.4 275 59.6
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.4e-87 327.0 284 58.8
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.4e-87 326.2 284 61.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 3.1e-87 325.9 282 61.0
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.2e-86 323.9 280 60.0
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.6e-86 322.8 282 58.2
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.4e-86 322.4 286 58.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 3.4e-86 322.4 272 61.4
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 5.8e-86 321.6 282 58.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.3e-85 320.5 284 60.9
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.2e-85 319.7 286 57.3
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.4e-84 317.0 276 58.7
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 2.4e-84 316.2 284 58.8
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.2e-84 315.8 276 58.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.4e-84 315.1 286 57.7
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.2e-83 313.9 285 58.2
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 3.5e-83 312.4 276 58.0
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 4.6e-83 312.0 277 57.8
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 6.0e-83 311.6 272 57.7
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 7.9e-83 311.2 286 58.0
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 7.9e-83 311.2 274 59.5
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.9e-83 311.2 296 56.1
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.3e-82 310.5 275 60.7
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.7e-82 310.1 282 57.4
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 5.1e-82 308.5 284 56.7
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.1e-81 307.4 282 58.2
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.3e-81 305.8 285 56.1
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 5.6e-81 305.1 282 56.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 5.6e-81 305.1 280 56.8
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 5.6e-81 305.1 287 57.1
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 7.4e-81 304.7 283 57.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 7.4e-81 304.7 276 56.5
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 9.6e-81 304.3 282 57.1
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.3e-80 303.9 283 57.6
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.1e-80 303.1 280 57.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.8e-80 302.8 287 57.5
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 4.8e-80 302.0 280 56.8
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 6.2e-80 301.6 280 55.7
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 6.2e-80 301.6 280 55.7
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.1e-79 300.8 277 57.4
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.1e-79 300.8 291 55.3
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 6.9e-79 298.1 287 54.4
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 4.5e-78 295.4 274 56.2
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 9.9e-78 294.3 293 51.2
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.2e-77 293.1 274 55.1
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.2e-77 293.1 292 54.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.2e-77 293.1 276 56.5
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 3.8e-77 292.4 281 54.4
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 4.9e-77 292.0 290 54.8
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.4e-76 290.4 281 54.4
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 4.2e-76 288.9 271 56.5
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 7.1e-76 288.1 281 53.7
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 1.2e-75 287.3 271 54.6
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 7.9e-75 284.6 280 52.5
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.0e-74 284.3 276 53.6
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.9e-73 280.0 270 53.7
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.8e-71 273.5 270 53.7
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 6.9e-71 271.6 271 55.7
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 6.9e-71 271.6 289 51.6
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.2e-70 270.8 269 54.3
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.0e-70 270.0 277 49.8
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.6e-70 269.6 273 54.6
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.6e-56 223.8 155 71.0
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.2e-51 207.6 161 66.5
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.4e-50 204.1 266 40.2
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.1e-47 194.5 171 59.1
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.3e-45 187.6 155 58.7
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.7e-40 170.6 164 53.0
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.5e-33 147.5 229 41.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 4.8e-32 142.5 256 34.8
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 6.3e-32 142.1 132 56.8
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 7.0e-31 138.7 195 42.1
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.5e-30 136.0 163 46.0
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.0e-29 134.8 304 32.9
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 8.8e-26 121.7 167 40.7
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.8e-24 115.9 133 48.9
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.5e-22 109.4 117 54.7
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 9.5e-20 101.7 110 50.0
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.0e-18 98.2 224 34.4
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 4.9e-16 89.4 151 39.1
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.4e-15 87.8 79 55.7
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 4.3e-12 76.3 63 58.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.0e-10 71.6 109 40.4
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.3e-08 64.7 38 73.7
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.9e-08 62.8 62 46.8
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 4.1e-07 59.7 51 56.9
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.6e-06 57.8 76 40.8


User provided reference genes

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