Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 3.7e-48 194.5 95 100.0
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 2.8e-24 115.2 102 68.6
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 4.0e-18 94.7 97 62.9
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 4.4e-17 91.3 97 60.8
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.3e-16 89.7 94 54.3
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 1.4e-15 86.3 95 60.0
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 1.8e-15 85.9 96 56.2
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 3.1e-15 85.1 97 55.7
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 7.0e-15 84.0 97 54.6
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.0e-13 80.1 97 51.5
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 6.5e-13 77.4 101 51.5
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 6.5e-13 77.4 98 49.0
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 1.1e-12 76.6 98 49.0
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 1.1e-12 76.6 98 49.0
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 1.9e-12 75.9 95 50.5
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 2.5e-12 75.5 91 50.5
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.5e-12 75.5 97 48.5
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 3.2e-12 75.1 89 51.7
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.2e-12 75.1 100 44.0
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.2e-12 74.7 101 45.5
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 1.2e-11 73.2 79 50.6
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 1.2e-11 73.2 92 48.9
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.2e-11 73.2 97 48.5
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.1e-11 72.4 90 54.4
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.8e-11 72.0 105 42.9
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.6e-11 71.6 103 47.6
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 3.6e-11 71.6 96 46.9
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 6.1e-11 70.9 98 50.0
ECA246G1803 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.0e-10 70.1 100 48.0
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 1.0e-10 70.1 92 47.8
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.8e-10 69.3 103 42.7
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.3e-10 68.9 89 50.6
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 2.3e-10 68.9 86 48.8
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 3.0e-10 68.6 91 45.1
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 3.0e-10 68.6 100 45.0
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 3.0e-10 68.6 90 51.1
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.2e-10 67.8 105 43.8
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.5e-09 66.2 106 42.5
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.5e-09 66.2 95 49.5
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 2.0e-09 65.9 91 41.8
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 2.0e-09 65.9 97 46.4
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 3.4e-09 65.1 91 41.8
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 4.4e-09 64.7 93 44.1
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 4.4e-09 64.7 93 44.1
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 4.4e-09 64.7 98 48.0
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 5.7e-09 64.3 95 46.3
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 9.8e-09 63.5 97 46.4
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 9.8e-09 63.5 97 43.3
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 1.3e-08 63.2 89 46.1
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 1.7e-08 62.8 90 43.3
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 2.2e-08 62.4 93 43.0
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 2.2e-08 62.4 90 42.2
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 2.8e-08 62.0 91 42.9
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 4.9e-08 61.2 96 46.9
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 6.3e-08 60.8 94 43.6
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 1.1e-07 60.1 94 43.6
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 1.1e-07 60.1 92 42.4
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 1.4e-07 59.7 90 42.2
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 1.8e-07 59.3 89 40.4
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.8e-07 59.3 90 37.8
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 3.1e-07 58.5 86 45.3
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 3.1e-07 58.5 96 45.8
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 3.1e-07 58.5 94 42.6
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 5.4e-07 57.8 93 38.7
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 5.4e-07 57.8 90 41.1
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 7.0e-07 57.4 90 36.7
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 7.0e-07 57.4 90 41.1
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 9.2e-07 57.0 98 39.8
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 9.2e-07 57.0 90 41.1
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.2e-06 56.6 93 41.9
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 2.7e-06 55.5 91 38.5
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 3.5e-06 55.1 91 41.8
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 3.5e-06 55.1 91 41.8
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 4.5e-06 54.7 93 37.6
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 7.8e-06 53.9 91 37.4
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 7.8e-06 53.9 91 37.4


User provided reference genes

Program Settings