Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2619 Erigeron canadensis HOM05D004868 ORTHO05D006030 1.4e-184 649.4 320 100.0
HanXRQChr05g0161431 Helianthus annuus HOM05D004868 ORTHO05D006030 8.0e-156 553.9 319 86.8
HanXRQChr14g0447091 Helianthus annuus HOM05D004868 ORTHO05D006030 8.9e-147 523.9 286 88.5
Gorai.007G286600 Gossypium raimondii HOM05D004868 ORTHO05D006030 5.1e-142 508.1 330 76.7
AUR62005015 Chenopodium quinoa HOM05D004868 ORTHO05D006030 1.5e-141 506.5 321 76.9
Potri.005G046300 Populus trichocarpa HOM05D004868 ORTHO05D006030 1.5e-141 506.5 328 76.5
QL03p000506 Quercus lobata HOM05D004868 ORTHO05D006030 4.3e-141 505.0 336 74.7
Lsat_1_v5_gn_9_40320 Lactuca sativa HOM05D004868 ORTHO05D006030 9.5e-141 503.8 263 90.5
QL03p000170 Quercus lobata HOM05D004868 ORTHO05D006030 8.1e-140 500.7 336 74.1
Sabra05G0042300 Salix brachista HOM05D004868 ORTHO05D006030 1.1e-139 500.4 326 75.8
Potri.013G034000 Populus trichocarpa HOM05D004868 ORTHO05D006030 1.8e-139 499.6 326 75.8
Gohir.D11G266800 Gossypium hirsutum HOM05D004868 ORTHO05D006030 3.1e-139 498.8 330 75.5
TWI12G1223 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 8.9e-139 497.3 323 74.9
SalBow2G0736 Salvia bowleyana HOM05D004868 ORTHO05D006030 1.5e-138 496.5 320 75.3
TAR636G1948 Trochodendron aralioides HOM05D004868 ORTHO05D006030 2.6e-138 495.7 318 78.0
SGA_v2.0_scaffold146G36132 Striga asiatica HOM05D004868 ORTHO05D006030 1.7e-137 493.0 321 73.8
Manes.09G157900 Manihot esculenta HOM05D004868 ORTHO05D006030 2.2e-137 492.7 330 74.2
PGR004G1913 Punica granatum HOM05D004868 ORTHO05D006030 8.4e-137 490.7 333 73.3
Phvul.010G080900 Phaseolus vulgaris HOM05D004868 ORTHO05D006030 1.1e-136 490.3 342 71.1
A03p33990 Brassica napus HOM05D004868 ORTHO05D006030 1.4e-136 490.0 319 76.2
TWI36G0026 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 2.4e-136 489.2 323 73.1
BraA03t12574Z Brassica rapa HOM05D004868 ORTHO05D006030 7.1e-136 487.6 319 75.9
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea HOM05D004868 ORTHO05D006030 1.2e-135 486.9 340 70.6
Sp3g03920 Schrenkiella parvula HOM05D004868 ORTHO05D006030 1.2e-135 486.9 327 74.6
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea HOM05D004868 ORTHO05D006030 1.6e-135 486.5 333 72.7
Peaxi162Scf00225g00143 Petunia axillaris HOM05D004868 ORTHO05D006030 2.7e-135 485.7 315 76.5
CiPaw.07G009000 Carya illinoinensis HOM05D004868 ORTHO05D006030 3.5e-135 485.3 330 72.4
Gohir.A11G257000 Gossypium hirsutum HOM05D004868 ORTHO05D006030 3.5e-135 485.3 327 73.7
MD04G1217100 Malus domestica HOM05D004868 ORTHO05D006030 6.0e-135 484.6 328 72.3
MSTRG.13789 Avicennia marina HOM05D004868 ORTHO05D006030 7.8e-135 484.2 320 73.4
Thhalv10021106m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 7.8e-135 484.2 324 75.0
Ah.06g192760 Amaranthus hybridus HOM05D004868 ORTHO05D006030 3.0e-134 482.3 292 78.8
Lalb_Chr13g0291821 Lupinus albus HOM05D004868 ORTHO05D006030 3.0e-134 482.3 331 71.9
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 3.9e-134 481.9 325 74.8
CAN.G134.187 Capsicum annuum HOM05D004868 ORTHO05D006030 5.1e-134 481.5 347 67.4
TPR.G7590 Trifolium pratense HOM05D004868 ORTHO05D006030 6.6e-134 481.1 326 72.7
Ciclev10001724m.g Citrus clementina HOM05D004868 ORTHO05D006030 8.6e-134 480.7 336 70.2
Lj3g0018370 Lotus japonicus HOM05D004868 ORTHO05D006030 8.6e-134 480.7 329 71.7
C03p41370 Brassica napus HOM05D004868 ORTHO05D006030 4.3e-133 478.4 321 74.5
MD12G1234100 Malus domestica HOM05D004868 ORTHO05D006030 4.3e-133 478.4 339 69.6
BcaC01g04334 Brassica carinata HOM05D004868 ORTHO05D006030 5.6e-133 478.0 321 74.8
Cc02_g31280 Coffea canephora HOM05D004868 ORTHO05D006030 5.6e-133 478.0 323 72.8
Medtr4g025410 Medicago truncatula HOM05D004868 ORTHO05D006030 5.6e-133 478.0 327 70.9
PSO170G6220 Papaver somniferum HOM05D004868 ORTHO05D006030 5.6e-133 478.0 327 73.7
Sed0014615 Sechium edule HOM05D004868 ORTHO05D006030 7.3e-133 477.6 323 71.5
BolC3t16420H Brassica oleracea HOM05D004868 ORTHO05D006030 9.6e-133 477.2 321 74.1
PSO210G5882 Papaver somniferum HOM05D004868 ORTHO05D006030 1.2e-132 476.9 327 73.4
Ca_13816_v3 Cicer arietinum L. HOM05D004868 ORTHO05D006030 2.1e-132 476.1 327 71.3
Actinidia33836 Actinidia chinensis HOM05D004868 ORTHO05D006030 2.8e-132 475.7 334 72.2
Ah.04g160130 Amaranthus hybridus HOM05D004868 ORTHO05D006030 3.6e-132 475.3 265 82.6
Carub.0003s0434 Capsella rubella HOM05D004868 ORTHO05D006030 4.7e-132 474.9 325 72.3
FAN02G0279 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.2e-132 474.6 335 69.6
FAN09G4706 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.2e-132 474.6 332 69.9
Atru.chr2.656 Acer truncatum HOM05D004868 ORTHO05D006030 8.1e-132 474.2 317 73.2
DCAR_022833 Daucus carota HOM05D004868 ORTHO05D006030 8.1e-132 474.2 261 83.9
CSS0010529 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.1e-131 473.8 294 77.9
FAN05G2179 Fragaria x ananassa HOM05D004868 ORTHO05D006030 1.1e-131 473.8 332 70.2
FAN05G5662 Fragaria x ananassa HOM05D004868 ORTHO05D006030 1.1e-131 473.8 332 70.2
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla HOM05D004868 ORTHO05D006030 1.1e-131 473.8 330 71.8
CANSAT54G1013 Cannabis sativa HOM05D004868 ORTHO05D006030 1.4e-131 473.4 268 82.1
MSTRG.12666 Avicennia marina HOM05D004868 ORTHO05D006030 1.8e-131 473.0 320 73.1
Lalb_Chr12g0208121 Lupinus albus HOM05D004868 ORTHO05D006030 3.1e-131 472.2 328 70.7
Duzib177G0825 Durio zibethinus HOM05D004868 ORTHO05D006030 5.2e-131 471.5 327 72.5
TPR.G39359 Trifolium pratense HOM05D004868 ORTHO05D006030 5.2e-131 471.5 307 75.2
EL10Ac4g09208 Beta vulgaris HOM05D004868 ORTHO05D006030 6.9e-131 471.1 265 81.9
A05p42480 Brassica napus HOM05D004868 ORTHO05D006030 1.2e-130 470.3 321 73.2
BraA05t23004Z Brassica rapa HOM05D004868 ORTHO05D006030 1.2e-130 470.3 321 73.2
Migut.B00327 Erythranthe guttata HOM05D004868 ORTHO05D006030 1.2e-130 470.3 319 73.0
AL3G15480 Arabidopsis lyrata HOM05D004868 ORTHO05D006030 1.5e-130 469.9 329 71.1
BcaNung04260 Brassica carinata HOM05D004868 ORTHO05D006030 4.4e-130 468.4 319 71.5
BolC5t34872H Brassica oleracea HOM05D004868 ORTHO05D006030 4.4e-130 468.4 322 73.3
Rhsim05G0148800 Rhododendron simsii HOM05D004868 ORTHO05D006030 4.4e-130 468.4 265 82.6
FAN14G3773 Fragaria x ananassa HOM05D004868 ORTHO05D006030 5.8e-130 468.0 335 69.0
BcaB04g21374 Brassica carinata HOM05D004868 ORTHO05D006030 9.9e-130 467.2 322 72.0
CSS0039857 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 9.9e-130 467.2 284 78.2
Prupe.6G337200 Prunus persica HOM05D004868 ORTHO05D006030 9.9e-130 467.2 263 81.7
AT3G05100 Arabidopsis thaliana HOM05D004868 ORTHO05D006030 1.3e-129 466.8 324 71.6
BraA06t26695Z Brassica rapa HOM05D004868 ORTHO05D006030 1.7e-129 466.5 319 71.2
MELO3C010076.2 Cucumis melo HOM05D004868 ORTHO05D006030 1.7e-129 466.5 321 70.7
Aa31LG5G15350 Aethionema arabicum HOM05D004868 ORTHO05D006030 2.2e-129 466.1 331 71.0
ClCG03G010920 Citrullus lanatus HOM05D004868 ORTHO05D006030 2.2e-129 466.1 321 69.8
C07p40470 Brassica napus HOM05D004868 ORTHO05D006030 2.9e-129 465.7 319 71.2
BolC7t44582H Brassica oleracea HOM05D004868 ORTHO05D006030 2.9e-129 465.7 319 71.2
Glyma.01G139000 Glycine max HOM05D004868 ORTHO05D006030 2.9e-129 465.7 341 68.0
Oeu012475.1 Olea europaea HOM05D004868 ORTHO05D006030 2.9e-129 465.7 264 81.8
CSS0028974 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 3.8e-129 465.3 284 78.2
Eucgr.H04401 Eucalyptus grandis HOM05D004868 ORTHO05D006030 6.4e-129 464.5 318 71.4
Nitab4.5_0002840g0160 Nicotiana tabacum HOM05D004868 ORTHO05D006030 1.1e-128 463.8 324 70.7
Thecc.05G291500 Theobroma cacao HOM05D004868 ORTHO05D006030 1.4e-128 463.4 265 81.9
VMungo0331G1201 Vigna mungo HOM05D004868 ORTHO05D006030 2.4e-128 462.6 336 67.9
Haze_04309 Corylus avellana HOM05D004868 ORTHO05D006030 3.2e-128 462.2 263 80.2
CsaV3_1G044760 Cucumis sativus L. HOM05D004868 ORTHO05D006030 3.2e-128 462.2 321 70.1
FvH4_6g03940 Fragaria vesca HOM05D004868 ORTHO05D006030 3.2e-128 462.2 335 68.4
Nitab4.5_0002361g0200 Nicotiana tabacum HOM05D004868 ORTHO05D006030 3.2e-128 462.2 324 70.4
Solyc01g098040.3 Solanum lycopersicum HOM05D004868 ORTHO05D006030 4.2e-128 461.8 269 79.2
Glyma.03G028300 Glycine max HOM05D004868 ORTHO05D006030 7.1e-128 461.1 341 67.7
Sopen01g041620 Solanum pennellii HOM05D004868 ORTHO05D006030 7.1e-128 461.1 269 79.2
Carub.0006s2543 Capsella rubella HOM05D004868 ORTHO05D006030 9.3e-128 460.7 327 70.3
RcHm_v2.0_Chr3g0452511 Rosa chinensis HOM05D004868 ORTHO05D006030 9.3e-128 460.7 263 80.6
PGSC0003DMG400022466 Solanum tuberosum HOM05D004868 ORTHO05D006030 9.3e-128 460.7 269 78.8
Aa31LG11G8840 Aethionema arabicum HOM05D004868 ORTHO05D006030 2.1e-127 459.5 326 71.2
Thhalv10004543m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 2.1e-127 459.5 326 69.9
Cfa006482 Carpinus fangiana HOM05D004868 ORTHO05D006030 1.0e-126 457.2 263 79.8
BcaNung04261 Brassica carinata HOM05D004868 ORTHO05D006030 1.3e-126 456.8 319 70.2
Aqoxy5G00612 Aquilegia oxysepala HOM05D004868 ORTHO05D006030 2.3e-126 456.1 267 80.5
CSS0000773 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 2.3e-126 456.1 265 80.0
Hund07000 Selenicereus undatus HOM05D004868 ORTHO05D006030 3.0e-126 455.7 309 71.8
Sed0017257 Sechium edule HOM05D004868 ORTHO05D006030 1.1e-125 453.8 319 69.6
C05p62140 Brassica napus HOM05D004868 ORTHO05D006030 5.6e-125 451.4 284 76.8
CARHR185710 Cardamine hirsuta HOM05D004868 ORTHO05D006030 7.3e-125 451.1 327 68.8
Lj9A672G84 Lonicera japonica HOM05D004868 ORTHO05D006030 4.8e-124 448.4 240 86.2
Sp2g20350 Schrenkiella parvula HOM05D004868 ORTHO05D006030 4.8e-124 448.4 308 71.1
CiPaw.08G177900 Carya illinoinensis HOM05D004868 ORTHO05D006030 3.1e-123 445.7 263 78.7
GSVIVG01021894001 Vitis vinifera HOM05D004868 ORTHO05D006030 3.4e-122 442.2 242 84.7
MBI18_g14729_MAGBIO Magnolia biondii HOM05D004868 ORTHO05D006030 4.9e-121 438.3 321 69.2
unitig_8.g3689 Utricularia gibba HOM05D004868 ORTHO05D006030 8.4e-121 437.6 321 66.4
AUR62000953 Chenopodium quinoa HOM05D004868 ORTHO05D006030 2.3e-118 429.5 241 83.8
ATR0618G246 Amborella trichopoda HOM05D004868 ORTHO05D006030 8.1e-116 421.0 260 76.2
Zm00001eb110980 Zea mays HOM05D004868 ORTHO05D006030 1.6e-111 406.8 273 70.3
Nn4g26018 Nelumbo nucifera HOM05D004868 ORTHO05D006030 3.5e-111 405.6 221 83.7
Sabra13G0033200 Salix brachista HOM05D004868 ORTHO05D006030 4.6e-111 405.2 247 78.9
Psat7g231080 Pisum sativum HOM05D004868 ORTHO05D006030 1.0e-110 404.1 219 83.1
Os07g0667400 Oryza sativa ssp. japonica HOM05D004868 ORTHO05D006030 1.3e-110 403.7 332 61.4
Lj7C479T1 Lonicera japonica HOM05D004868 ORTHO05D006030 2.3e-110 402.9 217 83.9
Dinv02605 Davidia involucrata HOM05D004868 ORTHO05D006030 1.6e-108 396.7 221 83.3
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 6.2e-108 394.8 214 84.6
vmacro05392 Vaccinium macrocarpon HOM05D004868 ORTHO05D006030 1.2e-106 390.6 228 79.8
HPP92_011336 Vanilla planifolia HOM05D004868 ORTHO05D006030 1.2e-106 390.6 315 63.5
HPP92_016882 Vanilla planifolia HOM05D004868 ORTHO05D006030 1.3e-105 387.1 325 60.9
SEGI_16580 Sequoiadendron giganteum HOM05D004868 ORTHO05D006030 1.6e-103 380.2 265 69.8
Dinv02602 Davidia involucrata HOM05D004868 ORTHO05D006030 7.9e-103 377.9 208 84.1
SHI18309 Sapria himalayana HOM05D004868 ORTHO05D006030 9.0e-99 364.4 218 75.7
SMO203G0024 Selaginella moellendorffii HOM05D004868 ORTHO05D006030 3.8e-97 359.0 321 57.0
Oeu027042.1 Olea europaea HOM05D004868 ORTHO05D006030 1.5e-93 347.1 293 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis HOM05D004868 ORTHO05D006030 4.1e-91 339.0 316 55.7
TAR365G1069 Trochodendron aralioides HOM05D004868 ORTHO05D006030 5.3e-83 312.0 221 73.3
Pp3c9_1110 Physcomitrium patens HOM05D004868 ORTHO05D006030 1.1e-77 294.3 233 60.5
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 5.7e-77 292.0 162 82.7
Cpa.g.c47757 Carica papaya HOM05D004868 ORTHO05D006030 1.9e-72 276.9 152 84.2
BcaC05g29994 Brassica carinata HOM05D004868 ORTHO05D006030 2.1e-71 273.5 218 65.1
Nn3g21303 Nelumbo nucifera HOM05D004868 ORTHO05D006030 6.1e-71 271.9 214 66.8
A06p37760 Brassica napus HOM05D004868 ORTHO05D006030 7.5e-69 265.0 198 68.2
CARHR079420 Cardamine hirsuta HOM05D004868 ORTHO05D006030 3.1e-67 259.6 209 66.0
CDE08G0242 Ceratophyllum demersum HOM05D004868 ORTHO05D006030 4.1e-67 259.2 229 59.4
Sc09g0003690 Simmondsia chinensis HOM05D004868 ORTHO05D006030 1.0e-65 254.6 149 78.5
CDE02G4194 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 6.3e-52 208.8 126 76.2
HPP92_028573 Vanilla planifolia HOM05D004868 ORTHO05D006030 2.0e-50 203.8 147 67.3
BcaB04g19280 Brassica carinata HOM05D004868 ORTHO05D006030 8.0e-39 165.2 171 56.7
Lj7C479T9 Lonicera japonica HOM05D004868 ORTHO05D027635 1.5e-21 107.8 102 59.8
Lsat_1_v5_gn_5_121600 Lactuca sativa HOM05D004868 ORTHO05D027635 8.4e-20 102.1 83 62.7
BcaNung04262 Brassica carinata HOM05D004868 ORTHO05D027635 1.1e-16 91.7 103 53.4
BolC1t05715H Brassica oleracea HOM05D004868 ORTHO05D006030 1.1e-14 85.1 49 77.6
SHI18307 Sapria himalayana HOM05D004868 ORTHO05D027635 1.4e-11 74.7 100 47.0


User provided reference genes

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