Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 1.8e-59 232.3 109 100.0
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 6.7e-46 187.2 107 81.3
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 3.6e-39 164.9 107 77.6
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 1.3e-33 146.4 109 62.4
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 5.5e-32 141.0 104 59.6
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 9.4e-32 140.2 104 59.6
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 9.4e-32 140.2 100 60.0
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 6.1e-31 137.5 80 75.0
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 6.1e-31 137.5 111 58.6
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 8.0e-31 137.1 106 60.4
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 1.4e-30 136.3 73 74.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 1.8e-30 136.0 91 65.9
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 2.3e-30 135.6 80 70.0
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 3.0e-30 135.2 104 60.6
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 4.0e-30 134.8 107 62.6
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 6.8e-30 134.0 70 74.3
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 8.8e-30 133.7 105 61.9
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 1.5e-29 132.9 71 76.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 2.0e-29 132.5 72 73.6
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 2.0e-29 132.5 122 50.0
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 2.6e-29 132.1 114 57.0
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 3.4e-29 131.7 114 57.0
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 5.7e-29 131.0 102 58.8
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 7.5e-29 130.6 114 57.9
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 2.2e-28 129.0 84 64.3
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.8e-28 128.6 90 63.3
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 3.7e-28 128.3 76 68.4
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 8.3e-28 127.1 93 55.9
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 1.4e-27 126.3 62 79.0
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 2.4e-27 125.6 99 56.6
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 3.1e-27 125.2 97 59.8
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 4.1e-27 124.8 108 55.6
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 4.1e-27 124.8 101 56.4
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 7.0e-27 124.0 89 60.7
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 7.0e-27 124.0 82 67.1
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 9.1e-27 123.6 62 79.0
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.2e-26 123.2 88 65.9
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 2.7e-26 122.1 105 54.3
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 6.5e-25 117.5 72 66.7
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.5e-24 116.3 97 55.7
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 7.2e-24 114.0 104 51.0
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 1.2e-23 113.2 89 55.1
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 1.6e-23 112.8 104 51.9
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 2.8e-23 112.1 68 64.7
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 6.1e-23 110.9 64 70.3
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.0e-22 110.2 100 53.0
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.0e-22 110.2 63 68.3
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 1.4e-22 109.8 83 57.8
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 1.4e-22 109.8 83 57.8
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.3e-22 109.0 86 59.3
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 2.3e-22 109.0 86 59.3
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 4.0e-22 108.2 92 55.4
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 8.9e-22 107.1 102 52.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 3.4e-21 105.1 92 52.2
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.3e-20 103.2 76 53.9
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 1.7e-20 102.8 116 44.8
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.2e-20 102.4 116 44.8
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.2e-20 102.4 82 56.1
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 8.3e-20 100.5 77 55.8
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 1.1e-19 100.1 107 43.9
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.8e-19 99.4 82 54.9
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.8e-19 99.4 92 46.7
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 2.4e-19 99.0 111 47.7
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 3.1e-19 98.6 110 47.3
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 4.1e-19 98.2 102 42.2
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 9.2e-19 97.1 82 57.3
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 1.2e-18 96.7 118 43.2
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 2.0e-18 95.9 64 62.5
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.0e-18 95.9 97 49.5
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.5e-18 95.1 103 49.5
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 5.9e-18 94.4 84 51.2
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 7.8e-18 94.0 89 50.6
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 1.3e-17 93.2 118 42.4
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 1.7e-17 92.8 80 52.5
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 1.7e-17 92.8 104 42.3
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 3.8e-17 91.7 80 52.5
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 3.8e-17 91.7 62 67.7
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 5.0e-17 91.3 81 49.4
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 5.0e-17 91.3 81 54.3
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 7.3e-16 87.4 107 40.2
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 7.3e-16 87.4 90 42.2
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.2e-15 86.7 92 46.7
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 8.0e-15 84.0 93 43.0
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 5.2e-14 81.3 47 66.0
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 5.2e-14 81.3 43 69.8
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.4e-11 72.4 44 61.4
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 2.7e-10 68.9 41 73.2
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 6.2e-07 57.8 30 66.7


User provided reference genes

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